RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 CHGBP05060 677 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 MAPK4P31152 587 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 HERVK_113P62684 666 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 IRX3P78415 501 aaPredicted RBP15.91■□□□□ 0.14
H3F3B-213ENST00000593254 EVX2Q03828 476 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 CCL14Q16627 93 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 ABCB5Q2M3G0 1257 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 MORN1Q5T089 497 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 FAM161BQ96MY7 647 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 EMILIN3Q9NT22 766 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 ATP8A2Q9NTI2 1148 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 RBPJLQ9UBG7 517 aa15.91■□□□□ 0.14
H3F3B-213ENST00000593254 PRKAB2O43741 272 aa15.9■□□□□ 0.14
H3F3B-213ENST00000593254 RAB3GAP1Q15042 981 aa15.9■□□□□ 0.14
H3F3B-213ENST00000593254 Q3C1V9 767 aa15.9■□□□□ 0.14
H3F3B-213ENST00000593254 ZSCAN25Q6NSZ9 544 aa15.9■□□□□ 0.14
H3F3B-213ENST00000593254 USP17L2Q6R6M4 530 aa15.9■□□□□ 0.14
H3F3B-213ENST00000593254 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
H3F3B-213ENST00000593254 C12orf42Q96LP6 360 aa15.9■□□□□ 0.14
H3F3B-213ENST00000593254 CABP5Q9NP86 173 aa15.9■□□□□ 0.14
H3F3B-213ENST00000593254 CYP2D6P10635 497 aa15.89■□□□□ 0.13
H3F3B-213ENST00000593254 GUCY1A2P33402 732 aa15.89■□□□□ 0.13
H3F3B-213ENST00000593254 RGS2P41220 211 aa15.89■□□□□ 0.13
H3F3B-213ENST00000593254 ERVK-9P63128 1117 aa15.89■□□□□ 0.13
H3F3B-213ENST00000593254 ERVK-24P63145 666 aa15.89■□□□□ 0.13
H3F3B-213ENST00000593254 GPR142Q7Z601 462 aa15.89■□□□□ 0.13
H3F3B-213ENST00000593254 GPATCH3Q96I76 525 aa15.89■□□□□ 0.13
H3F3B-213ENST00000593254 APBA2Q99767 749 aa15.89■□□□□ 0.13
H3F3B-213ENST00000593254 KIAA1683Q9H0B3 1180 aa15.89■□□□□ 0.13
H3F3B-213ENST00000593254 PUS7LQ9H0K6 701 aaKnown RBP15.89■□□□□ 0.13
H3F3B-213ENST00000593254 PORCNQ9H237 461 aa15.89■□□□□ 0.13
H3F3B-213ENST00000593254 RLFQ13129 1914 aa15.88■□□□□ 0.13
H3F3B-213ENST00000593254 USP14P54578 494 aa15.88■□□□□ 0.13
H3F3B-213ENST00000593254 ZNF697Q5TEC3 545 aa15.88■□□□□ 0.13
H3F3B-213ENST00000593254 TSHZ3Q63HK5 1081 aa15.88■□□□□ 0.13
H3F3B-213ENST00000593254 KBTBD3Q8NAB2 608 aa15.88■□□□□ 0.13
H3F3B-213ENST00000593254 ACER1Q8TDN7 264 aa15.88■□□□□ 0.13
H3F3B-213ENST00000593254 CDX2Q99626 313 aaPredicted RBP15.88■□□□□ 0.13
H3F3B-213ENST00000593254 FEZ1Q99689 392 aa15.88■□□□□ 0.13
H3F3B-213ENST00000593254 LBHD1Q9BQE6 289 aaPredicted RBP15.88■□□□□ 0.13
H3F3B-213ENST00000593254 PRDM6Q9NQX0 595 aa15.88■□□□□ 0.13
H3F3B-213ENST00000593254 SWAP70Q9UH65 585 aa15.88■□□□□ 0.13
H3F3B-213ENST00000593254 SEPT2Q15019 361 aa15.87■□□□□ 0.13
H3F3B-213ENST00000593254 ZYXQ15942 572 aaKnown RBP15.87■□□□□ 0.13
H3F3B-213ENST00000593254 PLEKHH3Q7Z736 793 aa15.87■□□□□ 0.13
H3F3B-213ENST00000593254 SLC44A5Q8NCS7 719 aa15.87■□□□□ 0.13
H3F3B-213ENST00000593254 GTF3C2Q8WUA4 911 aaPredicted RBP15.87■□□□□ 0.13
H3F3B-213ENST00000593254 YTHDC1Q96MU7 727 aaKnown RBP15.87■□□□□ 0.13
H3F3B-213ENST00000593254 SENP6Q9GZR1 1112 aaPredicted RBP15.87■□□□□ 0.13
H3F3B-213ENST00000593254 NCOR1O75376 2440 aa15.87■□□□□ 0.13
H3F3B-213ENST00000593254 TTC41PQ6P2S7 1318 aa15.87■□□□□ 0.13
H3F3B-213ENST00000593254 VCAM1P19320 739 aa15.86■□□□□ 0.13
H3F3B-213ENST00000593254 C12orf60Q5U649 245 aa15.86■□□□□ 0.13
H3F3B-213ENST00000593254 MAFAQ8NHW3 353 aaPredicted RBP15.86■□□□□ 0.13
H3F3B-213ENST00000593254 DYNLL2Q96FJ2 89 aa15.86■□□□□ 0.13
H3F3B-213ENST00000593254 CRBNQ96SW2 442 aa15.86■□□□□ 0.13
H3F3B-213ENST00000593254 SEMA6BQ9H3T3 888 aa15.86■□□□□ 0.13
H3F3B-213ENST00000593254 SLC4A4Q9Y6R1 1079 aa15.86■□□□□ 0.13
H3F3B-213ENST00000593254 CYP2D7A0A087X1C5 515 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 USP17L15C9J2P7 530 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 USP17L13C9JLJ4 530 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 USP17L12C9JPN9 530 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 USP17L11C9JVI0 530 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 USP17L21D6R901 530 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 USP17L18D6R9N7 530 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 USP17L22D6RA61 530 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 USP17L17D6RBQ6 530 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 USP17L19D6RCP7 530 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 USP17L20D6RJB6 530 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 SMIM22K7EJ46 135 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 MPHOSPH10O00566 681 aaKnown RBP15.85■□□□□ 0.13
H3F3B-213ENST00000593254 USP17L24Q0WX57 530 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 MAP2K5Q13163 448 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 TMEM179Q6ZVK1 233 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 AMOTL1Q8IY63 956 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 DDRGK1Q96HY6 314 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 STRBPQ96SI9 672 aaKnown RBP15.85■□□□□ 0.13
H3F3B-213ENST00000593254 FLRT1Q9NZU1 646 aa15.85■□□□□ 0.13
H3F3B-213ENST00000593254 GREB1LQ9C091 1923 aaPredicted RBP15.84■□□□□ 0.13
H3F3B-213ENST00000593254 A0A1W2PRG0 241 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 ERC2O15083 957 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 IGHA2P01877 340 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 ZFYP08048 801 aaPredicted RBP15.84■□□□□ 0.13
H3F3B-213ENST00000593254 CDK8P49336 464 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 CTR9Q6PD62 1173 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 CATSPERGQ6ZRH7 1159 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 C16orf86Q6ZW13 317 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 PI4K2BQ8TCG2 481 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 OTUD7AQ8TE49 926 aaPredicted RBP15.84■□□□□ 0.13
H3F3B-213ENST00000593254 APPBP2Q92624 585 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 LPAR1Q92633 364 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 OSBP2Q969R2 916 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 PAGR1Q9BTK6 254 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 DDX20Q9UHI6 824 aaKnown RBP15.84■□□□□ 0.13
H3F3B-213ENST00000593254 PARP14Q460N5 1801 aa15.84■□□□□ 0.13
H3F3B-213ENST00000593254 DNM1LO00429 736 aa15.83■□□□□ 0.12
H3F3B-213ENST00000593254 RNF113AO15541 343 aaKnown RBP15.83■□□□□ 0.12
H3F3B-213ENST00000593254 MSCO60682 206 aa15.83■□□□□ 0.12
H3F3B-213ENST00000593254 CNMDO75829 334 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms