RNA–Protein interactions for RNA: ENST00000593166.1

SLC25A39-217, Transcript of solute carrier family 25 member 39, humanhuman

TSL 3

Gene SLC25A39, Length 797 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-217ENST00000593166 ANTXR2P58335 489 aa18.38■□□□□ 0.53
SLC25A39-217ENST00000593166 MAP2K1Q02750 393 aaPredicted RBP18.38■□□□□ 0.53
SLC25A39-217ENST00000593166 OTUD7BQ6GQQ9 843 aa18.38■□□□□ 0.53
SLC25A39-217ENST00000593166 GADL1Q6ZQY3 521 aa18.38■□□□□ 0.53
SLC25A39-217ENST00000593166 LPAR1Q92633 364 aa18.38■□□□□ 0.53
SLC25A39-217ENST00000593166 NEK1Q96PY6 1258 aa18.38■□□□□ 0.53
SLC25A39-217ENST00000593166 SLC45A1Q9Y2W3 748 aa18.38■□□□□ 0.53
SLC25A39-217ENST00000593166 TNKSO95271 1327 aa18.38■□□□□ 0.53
SLC25A39-217ENST00000593166 ALDH1A1P00352 501 aa18.37■□□□□ 0.53
SLC25A39-217ENST00000593166 TOP1P11387 765 aaKnown RBP18.37■□□□□ 0.53
SLC25A39-217ENST00000593166 ANAPC15P60006 121 aa18.37■□□□□ 0.53
SLC25A39-217ENST00000593166 DGKZQ13574 1117 aa18.37■□□□□ 0.53
SLC25A39-217ENST00000593166 ZYXQ15942 572 aaKnown RBP18.37■□□□□ 0.53
SLC25A39-217ENST00000593166 ADCK5Q3MIX3 580 aa18.37■□□□□ 0.53
SLC25A39-217ENST00000593166 FAM43AQ8N2R8 423 aa18.37■□□□□ 0.53
SLC25A39-217ENST00000593166 ENAHQ8N8S7 591 aaPredicted RBP18.37■□□□□ 0.53
SLC25A39-217ENST00000593166 GMCL1P1Q8NEA9 526 aa18.37■□□□□ 0.53
SLC25A39-217ENST00000593166 ZKSCAN3Q9BRR0 538 aa18.37■□□□□ 0.53
SLC25A39-217ENST00000593166 GOPCQ9HD26 462 aa18.37■□□□□ 0.53
SLC25A39-217ENST00000593166 F5H6K3 240 aa18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 HMGB1P09429 215 aaKnown RBP18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 VCAM1P19320 739 aa18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 KLRC3Q07444 240 aa18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 PABPC4Q13310 644 aaKnown RBP eCLIP18.36■□□□□ 0.538e-7■■■□□ 14.7
SLC25A39-217ENST00000593166 COL9A3Q14050 684 aaPredicted RBP18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 SART3Q15020 963 aaKnown RBP18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 SEC23AQ15436 765 aa18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 KIAA1755Q5JYT7 1200 aa18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 TREML2Q5T2D2 321 aa18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 LRRC47Q8N1G4 583 aaKnown RBP18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 WDR19Q8NEZ3 1342 aa18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 IL17RAQ96F46 866 aa18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 TMEM47Q9BQJ4 181 aa18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 WBP1LQ9NX94 342 aa18.36■□□□□ 0.53
SLC25A39-217ENST00000593166 MYH4Q9Y623 1939 aa18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 PDHXO00330 501 aa18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 IFIT3O14879 490 aaKnown RBP18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 WDR46O15213 610 aaKnown RBP18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 PRC1O43663 620 aa18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 NDUFB10O96000 172 aa18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 PSMA5P28066 241 aa18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 HOXA7P31268 230 aaPredicted RBP18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 DHX32Q7L7V1 743 aaKnown RBP18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 TMEM87BQ96K49 555 aa18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 JAKMIP1Q96N16 626 aaKnown RBP18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 CFHR5Q9BXR6 569 aa18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 TM6SF1Q9BZW5 370 aa18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 SAGE1Q9NXZ1 904 aa18.35■□□□□ 0.53
SLC25A39-217ENST00000593166 ERICH2A1L162 156 aa18.34■□□□□ 0.53
SLC25A39-217ENST00000593166 CA12O43570 354 aa18.34■□□□□ 0.53
SLC25A39-217ENST00000593166 CHST3Q7LGC8 479 aa18.34■□□□□ 0.53
SLC25A39-217ENST00000593166 IGDCC4Q8TDY8 1250 aa18.34■□□□□ 0.53
SLC25A39-217ENST00000593166 BACH2Q9BYV9 841 aa18.34■□□□□ 0.53
SLC25A39-217ENST00000593166 RNF186Q9NXI6 227 aa18.34■□□□□ 0.53
SLC25A39-217ENST00000593166 USP17L15C9J2P7 530 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 USP17L13C9JLJ4 530 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 USP17L11C9JVI0 530 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 USP17L18D6R9N7 530 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 USP17L22D6RA61 530 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 USP17L17D6RBQ6 530 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 USP17L19D6RCP7 530 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 USP17L20D6RJB6 530 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 EXOSC10Q01780 885 aaKnown RBP18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 USP17L24Q0WX57 530 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 TMEM67Q5HYA8 995 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 IFIT1BQ5T764 474 aaKnown RBP18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 SLFN13Q68D06 897 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 BLOC1S2Q6QNY1 142 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 SPICE1Q8N0Z3 855 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 GMCL1Q96IK5 515 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 PARK7Q99497 189 aaKnown RBP18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 KAT14Q9H8E8 782 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 PNMA3Q9UL41 463 aa18.33■□□□□ 0.52
SLC25A39-217ENST00000593166 SH2B2O14492 632 aaPredicted RBP18.32■□□□□ 0.52
SLC25A39-217ENST00000593166 WTAPQ15007 396 aa18.32■□□□□ 0.52
SLC25A39-217ENST00000593166 TAF1CQ15572 869 aaPredicted RBP18.32■□□□□ 0.52
SLC25A39-217ENST00000593166 CATSPERGQ6ZRH7 1159 aa18.32■□□□□ 0.52
SLC25A39-217ENST00000593166 PNMA1Q8ND90 353 aa18.32■□□□□ 0.52
SLC25A39-217ENST00000593166 BEGAINQ9BUH8 593 aa18.32■□□□□ 0.52
SLC25A39-217ENST00000593166 ASCC2Q9H1I8 757 aaPredicted RBP18.32■□□□□ 0.52
SLC25A39-217ENST00000593166 ZSWIM6Q9HCJ5 1215 aa18.32■□□□□ 0.52
SLC25A39-217ENST00000593166 CASTP20810 708 aaKnown RBP18.31■□□□□ 0.52
SLC25A39-217ENST00000593166 OSBPP22059 807 aa18.31■□□□□ 0.52
SLC25A39-217ENST00000593166 RPS6KB1P23443 525 aa18.31■□□□□ 0.52
SLC25A39-217ENST00000593166 LIFRP42702 1097 aa18.31■□□□□ 0.52
SLC25A39-217ENST00000593166 IRX3P78415 501 aaPredicted RBP18.31■□□□□ 0.52
SLC25A39-217ENST00000593166 DCAF4Q8WV16 495 aa18.31■□□□□ 0.52
SLC25A39-217ENST00000593166 UPF2Q9HAU5 1272 aaKnown RBP18.31■□□□□ 0.52
SLC25A39-217ENST00000593166 LY9Q9HBG7 655 aa18.31■□□□□ 0.52
SLC25A39-217ENST00000593166 ZFYVE28Q9HCC9 887 aa18.31■□□□□ 0.52
SLC25A39-217ENST00000593166 ADGRA2Q96PE1 1338 aa18.3■□□□□ 0.52
SLC25A39-217ENST00000593166 RAD21O60216 631 aa18.3■□□□□ 0.52
SLC25A39-217ENST00000593166 TRPA1O75762 1119 aa18.3■□□□□ 0.52
SLC25A39-217ENST00000593166 SNHG28P0DPA3 235 aa18.3■□□□□ 0.52
SLC25A39-217ENST00000593166 BMP3P12645 472 aa18.3■□□□□ 0.52
SLC25A39-217ENST00000593166 RBM25P49756 843 aaKnown RBP18.3■□□□□ 0.52
SLC25A39-217ENST00000593166 CRHR2Q13324 411 aa18.3■□□□□ 0.52
SLC25A39-217ENST00000593166 FAM83BQ5T0W9 1011 aa18.3■□□□□ 0.52
SLC25A39-217ENST00000593166 TMTC2Q8N394 836 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms