RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 FXR1P51114 621 aaKnown RBP eCLIP15.96■□□□□ 0.15
APOC1-209ENST00000592885 ICA1Q05084 483 aa15.96■□□□□ 0.15
APOC1-209ENST00000592885 COG2Q14746 738 aa15.96■□□□□ 0.15
APOC1-209ENST00000592885 KBTBD3Q8NAB2 608 aa15.96■□□□□ 0.15
APOC1-209ENST00000592885 SLC44A5Q8NCS7 719 aa15.96■□□□□ 0.15
APOC1-209ENST00000592885 PAWRQ96IZ0 340 aaKnown RBP15.96■□□□□ 0.15
APOC1-209ENST00000592885 TMX2Q9Y320 296 aa15.96■□□□□ 0.15
APOC1-209ENST00000592885 SLC4A4Q9Y6R1 1079 aa15.96■□□□□ 0.15
APOC1-209ENST00000592885 IVNS1ABPQ9Y6Y0 642 aa15.96■□□□□ 0.15
APOC1-209ENST00000592885 USP17L12C9JPN9 530 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 USP17L21D6R901 530 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 ZFYP08048 801 aaPredicted RBP15.95■□□□□ 0.14
APOC1-209ENST00000592885 PTPREP23469 700 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 CDK8P49336 464 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 GRB14Q14449 540 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 LRRFIP1Q32MZ4 808 aaKnown RBP15.95■□□□□ 0.14
APOC1-209ENST00000592885 GIMAP6Q6P9H5 292 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 CHRDL2Q6WN34 429 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 SHCBP1Q8NEM2 672 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 DYNLL2Q96FJ2 89 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 TANGO6Q9C0B7 1094 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 NBPF3Q9H094 633 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 BTBD7Q9P203 1132 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 ROBO3Q96MS0 1386 aa15.95■□□□□ 0.14
APOC1-209ENST00000592885 A0A1W2PPC1 479 aa15.94■□□□□ 0.14
APOC1-209ENST00000592885 WDR46O15213 610 aaKnown RBP15.94■□□□□ 0.14
APOC1-209ENST00000592885 AKR1B1P15121 316 aa15.94■□□□□ 0.14
APOC1-209ENST00000592885 CACNB2Q08289 660 aaPredicted RBP15.94■□□□□ 0.14
APOC1-209ENST00000592885 SLFNL1Q499Z3 407 aa15.94■□□□□ 0.14
APOC1-209ENST00000592885 MFSD14CQ5VZR4 134 aa15.94■□□□□ 0.14
APOC1-209ENST00000592885 DIS3LQ8TF46 1054 aaKnown RBP15.94■□□□□ 0.14
APOC1-209ENST00000592885 APPBP2Q92624 585 aa15.94■□□□□ 0.14
APOC1-209ENST00000592885 PUS7LQ9H0K6 701 aaKnown RBP15.94■□□□□ 0.14
APOC1-209ENST00000592885 PRO3102Q9H379 93 aa15.94■□□□□ 0.14
APOC1-209ENST00000592885 VCPKMTQ9H867 229 aa15.94■□□□□ 0.14
APOC1-209ENST00000592885 TTC41PQ6P2S7 1318 aa15.94■□□□□ 0.14
APOC1-209ENST00000592885 STRNO43815 780 aa15.93■□□□□ 0.14
APOC1-209ENST00000592885 CCL14Q16627 93 aa15.93■□□□□ 0.14
APOC1-209ENST00000592885 SBK1Q52WX2 424 aa15.93■□□□□ 0.14
APOC1-209ENST00000592885 WDR78Q5VTH9 848 aa15.93■□□□□ 0.14
APOC1-209ENST00000592885 CTR9Q6PD62 1173 aa15.93■□□□□ 0.14
APOC1-209ENST00000592885 C11orf49Q9H6J7 331 aa15.93■□□□□ 0.14
APOC1-209ENST00000592885 KANSL2Q9H9L4 492 aa15.93■□□□□ 0.14
APOC1-209ENST00000592885 CYP2D7A0A087X1C5 515 aa15.92■□□□□ 0.14
APOC1-209ENST00000592885 ERC2O15083 957 aa15.92■□□□□ 0.14
APOC1-209ENST00000592885 MSCO60682 206 aa15.92■□□□□ 0.14
APOC1-209ENST00000592885 CHGBP05060 677 aa15.92■□□□□ 0.14
APOC1-209ENST00000592885 GNAT2P19087 354 aa15.92■□□□□ 0.14
APOC1-209ENST00000592885 DSG3P32926 999 aa15.92■□□□□ 0.14
APOC1-209ENST00000592885 MNX1P50219 401 aaPredicted RBP15.92■□□□□ 0.14
APOC1-209ENST00000592885 SIAH1Q8IUQ4 282 aa15.92■□□□□ 0.14
APOC1-209ENST00000592885 STRBPQ96SI9 672 aaKnown RBP15.92■□□□□ 0.14
APOC1-209ENST00000592885 MOV10L1Q9BXT6 1211 aaKnown RBP15.92■□□□□ 0.14
APOC1-209ENST00000592885 SPATC1LQ9H0A9 340 aa15.92■□□□□ 0.14
APOC1-209ENST00000592885 RBM27Q9P2N5 1060 aaKnown RBP15.92■□□□□ 0.14
APOC1-209ENST00000592885 TRIOBPQ9H2D6 2365 aa15.92■□□□□ 0.14
APOC1-209ENST00000592885 RNF113AO15541 343 aaKnown RBP15.91■□□□□ 0.14
APOC1-209ENST00000592885 FLOT1O75955 427 aa15.91■□□□□ 0.14
APOC1-209ENST00000592885 CCND3P30281 292 aaPredicted RBP15.91■□□□□ 0.14
APOC1-209ENST00000592885 OLFML2BQ68BL8 750 aa15.91■□□□□ 0.14
APOC1-209ENST00000592885 ABRAQ8N0Z2 381 aa15.91■□□□□ 0.14
APOC1-209ENST00000592885 MROH8Q9H579 483 aa15.91■□□□□ 0.14
APOC1-209ENST00000592885 GOPCQ9HD26 462 aa15.91■□□□□ 0.14
APOC1-209ENST00000592885 COL11A1P12107 1806 aaPredicted RBP15.9■□□□□ 0.14
APOC1-209ENST00000592885 GSG1L2A8MUP6 293 aa15.9■□□□□ 0.14
APOC1-209ENST00000592885 IGHA2P01877 340 aa15.9■□□□□ 0.14
APOC1-209ENST00000592885 COL6A1P12109 1028 aa15.9■□□□□ 0.14
APOC1-209ENST00000592885 EEF2P13639 858 aaKnown RBP15.9■□□□□ 0.14
APOC1-209ENST00000592885 ATP2B2Q01814 1243 aa15.9■□□□□ 0.14
APOC1-209ENST00000592885 KIAA1755Q5JYT7 1200 aa15.9■□□□□ 0.14
APOC1-209ENST00000592885 LHX8Q68G74 356 aa15.9■□□□□ 0.14
APOC1-209ENST00000592885 CLEC10AQ8IUN9 316 aa15.9■□□□□ 0.14
APOC1-209ENST00000592885 ZNF287Q9HBT7 754 aa15.9■□□□□ 0.14
APOC1-209ENST00000592885 SLC5A4Q9NY91 659 aa15.9■□□□□ 0.14
APOC1-209ENST00000592885 GPAA1O43292 621 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 SLC25A27O95847 323 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 ERCC3P19447 782 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 ADORA2AP29274 412 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 COPB2P35606 906 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 DPP9Q86TI2 863 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 SPICE1Q8N0Z3 855 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 OSBP2Q969R2 916 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 ATG4CQ96DT6 458 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 FLRT1Q9NZU1 646 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 ADAMTS5Q9UNA0 930 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 PFASO15067 1338 aa15.89■□□□□ 0.13
APOC1-209ENST00000592885 SMIM22K7EJ46 135 aa15.88■□□□□ 0.13
APOC1-209ENST00000592885 RASA1P20936 1047 aa15.88■□□□□ 0.13
APOC1-209ENST00000592885 RRP1P56182 461 aaKnown RBP15.88■□□□□ 0.13
APOC1-209ENST00000592885 C7orf61Q8IZ16 206 aa15.88■□□□□ 0.13
APOC1-209ENST00000592885 NPLOC4Q8TAT6 608 aa15.88■□□□□ 0.13
APOC1-209ENST00000592885 DDX20Q9UHI6 824 aaKnown RBP15.88■□□□□ 0.13
APOC1-209ENST00000592885 SYNPO2Q9UMS6 1093 aa15.88■□□□□ 0.13
APOC1-209ENST00000592885 MYH4Q9Y623 1939 aa15.88■□□□□ 0.13
APOC1-209ENST00000592885 CYBAP13498 195 aa15.87■□□□□ 0.13
APOC1-209ENST00000592885 BMP8BP34820 402 aa15.87■□□□□ 0.13
APOC1-209ENST00000592885 TDO2P48775 406 aa15.87■□□□□ 0.13
APOC1-209ENST00000592885 TSHZ3Q63HK5 1081 aa15.87■□□□□ 0.13
APOC1-209ENST00000592885 PI4K2BQ8TCG2 481 aa15.87■□□□□ 0.13
APOC1-209ENST00000592885 NACAP1Q9BZK3 213 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms