RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
RANBP3-229ENST00000592771 TCP11L1Q9NUJ3 509 aa16.35■□□□□ 0.21
RANBP3-229ENST00000592771 MYH1P12882 1939 aa16.35■□□□□ 0.21
RANBP3-229ENST00000592771 PLEKHA8P1O95397 391 aa16.35■□□□□ 0.21
RANBP3-229ENST00000592771 GNL2Q13823 731 aaKnown RBP16.35■□□□□ 0.21
RANBP3-229ENST00000592771 DGKHQ86XP1 1220 aa16.35■□□□□ 0.21
RANBP3-229ENST00000592771 KIF18AQ8NI77 898 aa16.35■□□□□ 0.21
RANBP3-229ENST00000592771 SHISA4Q96DD7 197 aa16.35■□□□□ 0.21
RANBP3-229ENST00000592771 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.35■□□□□ 0.21
RANBP3-229ENST00000592771 KCNJ14Q9UNX9 436 aa16.35■□□□□ 0.21
RANBP3-229ENST00000592771 CNTNAP5Q8WYK1 1306 aa16.34■□□□□ 0.21
RANBP3-229ENST00000592771 BTBD18B2RXH4 712 aa16.34■□□□□ 0.21
RANBP3-229ENST00000592771 CCP110O43303 1012 aa16.34■□□□□ 0.21
RANBP3-229ENST00000592771 CCDC178Q5BJE1 867 aa16.34■□□□□ 0.21
RANBP3-229ENST00000592771 ILDR2Q71H61 639 aa16.34■□□□□ 0.21
RANBP3-229ENST00000592771 FILIP1Q7Z7B0 1213 aa16.34■□□□□ 0.21
RANBP3-229ENST00000592771 TEX11Q8IYF3 940 aa16.34■□□□□ 0.21
RANBP3-229ENST00000592771 CCDC82Q8N4S0 544 aa16.34■□□□□ 0.21
RANBP3-229ENST00000592771 DYNLL2Q96FJ2 89 aa16.34■□□□□ 0.21
RANBP3-229ENST00000592771 STK32BQ9NY57 414 aa16.34■□□□□ 0.21
RANBP3-229ENST00000592771 WDHD1O75717 1129 aaPredicted RBP16.33■□□□□ 0.21
RANBP3-229ENST00000592771 PLCD1P51178 756 aa16.33■□□□□ 0.21
RANBP3-229ENST00000592771 GTF2IP78347 998 aa16.33■□□□□ 0.21
RANBP3-229ENST00000592771 TFAP4Q01664 338 aa16.33■□□□□ 0.21
RANBP3-229ENST00000592771 MAPKAPK5Q8IW41 473 aa16.33■□□□□ 0.21
RANBP3-229ENST00000592771 IL17RBQ9NRM6 502 aa16.33■□□□□ 0.21
RANBP3-229ENST00000592771 OGFRQ9NZT2 677 aa16.33■□□□□ 0.21
RANBP3-229ENST00000592771 TUBE1Q9UJT0 475 aa16.33■□□□□ 0.21
RANBP3-229ENST00000592771 FLT1P17948 1338 aa16.33■□□□□ 0.2
RANBP3-229ENST00000592771 PFKFB1P16118 471 aa16.33■□□□□ 0.2
RANBP3-229ENST00000592771 AKAP17AQ02040 695 aaKnown RBP16.33■□□□□ 0.2
RANBP3-229ENST00000592771 DMTNQ08495 405 aa16.33■□□□□ 0.2
RANBP3-229ENST00000592771 SLC15A2Q16348 729 aa16.33■□□□□ 0.2
RANBP3-229ENST00000592771 DPCR1Q3MIW9 517 aa16.33■□□□□ 0.2
RANBP3-229ENST00000592771 OLFM4Q6UX06 510 aa16.33■□□□□ 0.2
RANBP3-229ENST00000592771 DPP8Q6V1X1 898 aaPredicted RBP16.33■□□□□ 0.2
RANBP3-229ENST00000592771 CTCFLQ8NI51 663 aaPredicted RBP16.33■□□□□ 0.2
RANBP3-229ENST00000592771 SNED1Q8TER0 1413 aa16.33■□□□□ 0.2
RANBP3-229ENST00000592771 ERO1AQ96HE7 468 aa16.33■□□□□ 0.2
RANBP3-229ENST00000592771 PHF20Q9BVI0 1012 aa16.33■□□□□ 0.2
RANBP3-229ENST00000592771 ZC3H12CQ9C0D7 883 aaKnown RBP16.33■□□□□ 0.2
RANBP3-229ENST00000592771 HPSEQ9Y251 543 aa16.33■□□□□ 0.2
RANBP3-229ENST00000592771 DAGLAQ9Y4D2 1042 aa16.33■□□□□ 0.2
RANBP3-229ENST00000592771 CBFA2T2O43439 604 aa16.32■□□□□ 0.2
RANBP3-229ENST00000592771 TOB1P50616 345 aaPredicted RBP16.32■□□□□ 0.2
RANBP3-229ENST00000592771 C16orf86Q6ZW13 317 aa16.32■□□□□ 0.2
RANBP3-229ENST00000592771 SRBD1Q8N5C6 995 aaKnown RBP16.32■□□□□ 0.2
RANBP3-229ENST00000592771 MORC2Q9Y6X9 1032 aaPredicted RBP16.32■□□□□ 0.2
RANBP3-229ENST00000592771 V9GY48 417 aaPredicted RBP16.32■□□□□ 0.2
RANBP3-229ENST00000592771 RIMBP2O15034 1052 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 XBP1P17861 261 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 RASA1P20936 1047 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 SYKP43405 635 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 RILPL1Q5EBL4 403 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 MSL1Q68DK7 614 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 STYK1Q6J9G0 422 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 CERS5Q8N5B7 392 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 MKNK2Q9HBH9 465 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 ZNF287Q9HBT7 754 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 ZSCAN20P17040 1043 aaPredicted RBP16.31■□□□□ 0.2
RANBP3-229ENST00000592771 SFPQP23246 707 aaKnown RBP eCLIP16.31■□□□□ 0.24e-6■■■□□ 15
RANBP3-229ENST00000592771 MARCKSP29966 332 aaPredicted RBP16.31■□□□□ 0.2
RANBP3-229ENST00000592771 ARID5BQ14865 1188 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 NCAPHQ15003 741 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 SLC4A8Q2Y0W8 1093 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 SLC44A5Q8NCS7 719 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 XPO4Q9C0E2 1151 aaKnown RBP16.31■□□□□ 0.2
RANBP3-229ENST00000592771 SAP30BPQ9UHR5 308 aaKnown RBP16.31■□□□□ 0.2
RANBP3-229ENST00000592771 PRDM4Q9UKN5 801 aa16.31■□□□□ 0.2
RANBP3-229ENST00000592771 CUTAO60888 179 aa16.3■□□□□ 0.2
RANBP3-229ENST00000592771 KIF5BP33176 963 aa16.3■□□□□ 0.2
RANBP3-229ENST00000592771 NR5A1Q13285 461 aa16.3■□□□□ 0.2
RANBP3-229ENST00000592771 NPY5RQ15761 445 aa16.3■□□□□ 0.2
RANBP3-229ENST00000592771 OXER1Q8TDS5 423 aa16.3■□□□□ 0.2
RANBP3-229ENST00000592771 KAT14Q9H8E8 782 aa16.3■□□□□ 0.2
RANBP3-229ENST00000592771 IFNKQ9P0W0 207 aa16.3■□□□□ 0.2
RANBP3-229ENST00000592771 VPS54Q9P1Q0 977 aa16.3■□□□□ 0.2
RANBP3-229ENST00000592771 ZNF646O15015 1829 aaPredicted RBP16.3■□□□□ 0.2
RANBP3-229ENST00000592771 SLX4Q8IY92 1834 aa16.3■□□□□ 0.2
RANBP3-229ENST00000592771 BAZ2BQ9UIF8 2168 aaKnown RBP16.3■□□□□ 0.2
RANBP3-229ENST00000592771 USP27XA6NNY8 438 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 SMC2O95347 1197 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 CBX1P83916 185 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 GRM4Q14833 912 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 RESP18Q5W5W9 173 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 SHC4Q6S5L8 630 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 C2CD5Q86YS7 1000 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 ZNF444Q8N0Y2 327 aaPredicted RBP16.29■□□□□ 0.2
RANBP3-229ENST00000592771 PNMA1Q8ND90 353 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 EYA3Q99504 573 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 USP17L3A6NCW0 530 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 USP17L4A6NCW7 530 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 SLU7O95391 586 aaKnown RBP16.29■□□□□ 0.2
RANBP3-229ENST00000592771 TSPY3P0CV98 308 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 TSPY8P0CW00 308 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 CDK8P49336 464 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 USP17L1Q7RTZ2 530 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 ZNF397Q8NF99 534 aaPredicted RBP16.29■□□□□ 0.2
RANBP3-229ENST00000592771 NEDD1Q8NHV4 660 aa16.29■□□□□ 0.2
RANBP3-229ENST00000592771 ZNF592Q92610 1267 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms