RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 LPAR1Q92633 364 aa24.47■■□□□ 1.51
DNMT1-227ENST00000592342 ZKSCAN3Q9BRR0 538 aa24.47■■□□□ 1.51
DNMT1-227ENST00000592342 UBAC1Q9BSL1 405 aa24.47■■□□□ 1.51
DNMT1-227ENST00000592342 ZSWIM5Q9P217 1185 aa24.47■■□□□ 1.51
DNMT1-227ENST00000592342 TAF6LQ9Y6J9 622 aa24.47■■□□□ 1.51
DNMT1-227ENST00000592342 GREB1LQ9C091 1923 aaPredicted RBP24.47■■□□□ 1.51
DNMT1-227ENST00000592342 PTPRFP10586 1907 aa24.46■■□□□ 1.51
DNMT1-227ENST00000592342 VCAM1P19320 739 aa24.46■■□□□ 1.51
DNMT1-227ENST00000592342 CTCFP49711 727 aaPredicted RBP24.46■■□□□ 1.51
DNMT1-227ENST00000592342 SPICE1Q8N0Z3 855 aa24.46■■□□□ 1.51
DNMT1-227ENST00000592342 LRRC47Q8N1G4 583 aaKnown RBP24.46■■□□□ 1.51
DNMT1-227ENST00000592342 SMCR8Q8TEV9 937 aaPredicted RBP24.46■■□□□ 1.51
DNMT1-227ENST00000592342 USP17L15C9J2P7 530 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 USP17L13C9JLJ4 530 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 USP17L11C9JVI0 530 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 USP17L18D6R9N7 530 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 USP17L22D6RA61 530 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 USP17L17D6RBQ6 530 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 USP17L19D6RCP7 530 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 USP17L20D6RJB6 530 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 EPB41L2O43491 1005 aaKnown RBP24.45■■□□□ 1.5
DNMT1-227ENST00000592342 CYP2C8P10632 490 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 MCCP23508 829 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 USP17L24Q0WX57 530 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 STOX1Q6ZVD7 989 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 MKL1Q969V6 931 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 CFHR5Q9BXR6 569 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 SYNPO2Q9UMS6 1093 aa24.45■■□□□ 1.5
DNMT1-227ENST00000592342 HOXA7P31268 230 aaPredicted RBP24.44■■□□□ 1.5
DNMT1-227ENST00000592342 NKX2-3Q8TAU0 364 aa24.44■■□□□ 1.5
DNMT1-227ENST00000592342 TTC14Q96N46 770 aa24.44■■□□□ 1.5
DNMT1-227ENST00000592342 ZSCAN10Q96SZ4 725 aaPredicted RBP24.44■■□□□ 1.5
DNMT1-227ENST00000592342 TANGO6Q9C0B7 1094 aa24.44■■□□□ 1.5
DNMT1-227ENST00000592342 RPAP3Q9H6T3 665 aaPredicted RBP24.44■■□□□ 1.5
DNMT1-227ENST00000592342 LOC285556D6RIA3 1793 aa24.44■■□□□ 1.5
DNMT1-227ENST00000592342 ERICH2A1L162 156 aa24.43■■□□□ 1.5
DNMT1-227ENST00000592342 F5H6K3 240 aa24.43■■□□□ 1.5
DNMT1-227ENST00000592342 WDR46O15213 610 aaKnown RBP24.43■■□□□ 1.5
DNMT1-227ENST00000592342 HSPA8P11142 646 aaKnown RBP24.43■■□□□ 1.5
DNMT1-227ENST00000592342 HSPA4P34932 840 aa24.43■■□□□ 1.5
DNMT1-227ENST00000592342 KLRC3Q07444 240 aa24.43■■□□□ 1.5
DNMT1-227ENST00000592342 KRT32Q14532 448 aa24.43■■□□□ 1.5
DNMT1-227ENST00000592342 ASCC2Q9H1I8 757 aaPredicted RBP24.43■■□□□ 1.5
DNMT1-227ENST00000592342 ISY1Q9ULR0 285 aaKnown RBP24.43■■□□□ 1.5
DNMT1-227ENST00000592342 TNKSO95271 1327 aa24.42■■□□□ 1.5
DNMT1-227ENST00000592342 TLR2O60603 784 aa24.42■■□□□ 1.5
DNMT1-227ENST00000592342 TOP1P11387 765 aaKnown RBP24.42■■□□□ 1.5
DNMT1-227ENST00000592342 SART3Q15020 963 aaKnown RBP24.42■■□□□ 1.5
DNMT1-227ENST00000592342 KIAA1755Q5JYT7 1200 aa24.42■■□□□ 1.5
DNMT1-227ENST00000592342 CYB5R4Q7L1T6 521 aa24.42■■□□□ 1.5
DNMT1-227ENST00000592342 DGKHQ86XP1 1220 aa24.42■■□□□ 1.5
DNMT1-227ENST00000592342 R3HDMLQ9H3Y0 253 aa24.42■■□□□ 1.5
DNMT1-227ENST00000592342 MTMR7Q9Y216 660 aa24.42■■□□□ 1.5
DNMT1-227ENST00000592342 NDUFB10O96000 172 aa24.41■■□□□ 1.5
DNMT1-227ENST00000592342 LBX1P52954 281 aa24.41■■□□□ 1.5
DNMT1-227ENST00000592342 SLFN13Q68D06 897 aa24.41■■□□□ 1.5
DNMT1-227ENST00000592342 CATSPERGQ6ZRH7 1159 aa24.41■■□□□ 1.5
DNMT1-227ENST00000592342 GMCL1P1Q8NEA9 526 aa24.41■■□□□ 1.5
DNMT1-227ENST00000592342 TMEM47Q9BQJ4 181 aa24.41■■□□□ 1.5
DNMT1-227ENST00000592342 USP26Q9BXU7 913 aa24.41■■□□□ 1.5
DNMT1-227ENST00000592342 GPR25O00155 361 aa24.4■■□□□ 1.5
DNMT1-227ENST00000592342 IFIT3O14879 490 aaKnown RBP24.4■■□□□ 1.5
DNMT1-227ENST00000592342 NOVP48745 357 aa24.4■■□□□ 1.5
DNMT1-227ENST00000592342 FAM83BQ5T0W9 1011 aa24.4■■□□□ 1.5
DNMT1-227ENST00000592342 CHST3Q7LGC8 479 aa24.4■■□□□ 1.5
DNMT1-227ENST00000592342 MB21D2Q8IYB1 491 aaPredicted RBP24.4■■□□□ 1.5
DNMT1-227ENST00000592342 RASEFQ8IZ41 740 aa24.4■■□□□ 1.5
DNMT1-227ENST00000592342 NEK1Q96PY6 1258 aa24.4■■□□□ 1.5
DNMT1-227ENST00000592342 KAT14Q9H8E8 782 aa24.4■■□□□ 1.5
DNMT1-227ENST00000592342 CPA4Q9UI42 421 aa24.4■■□□□ 1.5
DNMT1-227ENST00000592342 MCM5P33992 734 aa24.39■■□□□ 1.49
DNMT1-227ENST00000592342 TSGA10IPQ3SY00 556 aa24.39■■□□□ 1.49
DNMT1-227ENST00000592342 IFIT1BQ5T764 474 aaKnown RBP24.39■■□□□ 1.49
DNMT1-227ENST00000592342 RCSD1Q6JBY9 416 aa24.39■■□□□ 1.49
DNMT1-227ENST00000592342 SAMD1Q6SPF0 538 aaPredicted RBP24.39■■□□□ 1.49
DNMT1-227ENST00000592342 P2RX7Q99572 595 aaKnown RBP24.39■■□□□ 1.49
DNMT1-227ENST00000592342 FLOT1O75955 427 aa24.38■■□□□ 1.49
DNMT1-227ENST00000592342 SLC1A4P43007 532 aa24.38■■□□□ 1.49
DNMT1-227ENST00000592342 GCLCP48506 637 aaPredicted RBP24.38■■□□□ 1.49
DNMT1-227ENST00000592342 HERVK_113P62684 666 aa24.38■■□□□ 1.49
DNMT1-227ENST00000592342 ENAHQ8N8S7 591 aaPredicted RBP24.38■■□□□ 1.49
DNMT1-227ENST00000592342 CHMP4CQ96CF2 233 aa24.38■■□□□ 1.49
DNMT1-227ENST00000592342 NUP88Q99567 741 aaPredicted RBP24.38■■□□□ 1.49
DNMT1-227ENST00000592342 MYH4Q9Y623 1939 aa24.37■■□□□ 1.49
DNMT1-227ENST00000592342 PRC1O43663 620 aa24.37■■□□□ 1.49
DNMT1-227ENST00000592342 FKTNO75072 461 aa24.37■■□□□ 1.49
DNMT1-227ENST00000592342 COG2Q14746 738 aa24.37■■□□□ 1.49
DNMT1-227ENST00000592342 C8orf34Q49A92 452 aa24.37■■□□□ 1.49
DNMT1-227ENST00000592342 GTF3C2Q8WUA4 911 aaPredicted RBP24.37■■□□□ 1.49
DNMT1-227ENST00000592342 HOXC10Q9NYD6 342 aa24.37■■□□□ 1.49
DNMT1-227ENST00000592342 SNX14Q9Y5W7 946 aa24.37■■□□□ 1.49
DNMT1-227ENST00000592342 BMP3P12645 472 aa24.36■■□□□ 1.49
DNMT1-227ENST00000592342 SP3Q02447 781 aa24.36■■□□□ 1.49
DNMT1-227ENST00000592342 WTAPQ15007 396 aa24.36■■□□□ 1.49
DNMT1-227ENST00000592342 CCDC96Q2M329 555 aa24.36■■□□□ 1.49
DNMT1-227ENST00000592342 NOM1Q5C9Z4 860 aaKnown RBP24.36■■□□□ 1.49
DNMT1-227ENST00000592342 TMEM67Q5HYA8 995 aa24.36■■□□□ 1.49
DNMT1-227ENST00000592342 C17orf99Q6UX52 265 aa24.36■■□□□ 1.49
DNMT1-227ENST00000592342 ANKRD13CQ8N6S4 541 aa24.36■■□□□ 1.49
DNMT1-227ENST00000592342 PNMA1Q8ND90 353 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms