RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	UBAC1	Q9BSL1	405 aa		13.33	□□□□□ -0.28
CIRBP-236	ENST00000592051	MTA3	Q9BTC8	594 aa		13.33	□□□□□ -0.28
CIRBP-236	ENST00000592051	AGXT2	Q9BYV1	514 aa		13.33	□□□□□ -0.28
CIRBP-236	ENST00000592051	TBC1D2	Q9BYX2	928 aa		13.33	□□□□□ -0.28
CIRBP-236	ENST00000592051	VCPKMT	Q9H867	229 aa		13.33	□□□□□ -0.28
CIRBP-236	ENST00000592051	AS3MT	Q9HBK9	375 aa		13.33	□□□□□ -0.28
CIRBP-236	ENST00000592051	STX8	Q9UNK0	236 aa		13.33	□□□□□ -0.28
CIRBP-236	ENST00000592051	PHIP	Q8WWQ0	1821 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051		F5H6K3	240 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	NDUFB10	O96000	172 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	KLRC3	Q07444	240 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	GRM1	Q13255	1194 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	SNAPC2	Q13487	334 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	TOB2	Q14106	344 aa	Predicted RBP	13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	TREML2	Q5T2D2	321 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	USP17L2	Q6R6M4	530 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051		Q6ZUG5	572 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	FBXL16	Q8N461	479 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	TMEM87B	Q96K49	555 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	NUP88	Q99567	741 aa	Predicted RBP	13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	ARHGEF10L	Q9HCE6	1279 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	BRPF3	Q9ULD4	1205 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	CYP46A1	Q9Y6A2	500 aa		13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	WDR33	Q9C0J8	1336 aa	Known RBP	13.32	□□□□□ -0.28
CIRBP-236	ENST00000592051	CCL15-CCL14	A0A0B4J2E2	113 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	C19orf81	C9J6K1	198 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	LIFR	P42702	1097 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	GTF2A2	P52657	109 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	WTAP	Q15007	396 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	CCL15	Q16663	113 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	CCDC178	Q5BJE1	867 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	SPICE1	Q8N0Z3	855 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	GMCL1P1	Q8NEA9	526 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	CHMP4C	Q96CF2	233 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	FEZ1	Q99689	392 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	UPF2	Q9HAU5	1272 aa	Known RBP	13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	PDRG1	Q9NUG6	133 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	SYNPO2	Q9UMS6	1093 aa		13.31	□□□□□ -0.28
CIRBP-236	ENST00000592051	ATAD5	Q96QE3	1844 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	BTBD19	C9JJ37	291 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	SNHG28	P0DPA3	235 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	CETP	P11597	493 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	VCAM1	P19320	739 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	TM4SF4	P48230	202 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	NOG	Q13253	232 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	IFIT1B	Q5T764	474 aa	Known RBP	13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	SLFN13	Q68D06	897 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	POTEE	Q6S8J3	1075 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	SGMS1	Q86VZ5	419 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	FAM43A	Q8N2R8	423 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	PNMA1	Q8ND90	353 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	BRF1	Q92994	677 aa		13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	LARP6	Q9BRS8	491 aa	Known RBP	13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.3	□□□□□ -0.28
CIRBP-236	ENST00000592051	MANSC4	A6NHS7	340 aa	Predicted RBP	13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	NEK4	P51957	841 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	USP14	P54578	494 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	EVC	P57679	992 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	APOBR	Q0VD83	1088 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	TROAP	Q12815	778 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	SART3	Q15020	963 aa	Known RBP	13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	SLC35G1	Q2M3R5	365 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	PPP4R3B	Q5MIZ7	849 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	GADL1	Q6ZQY3	521 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	RAB11FIP4	Q86YS3	637 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	GMCL1	Q96IK5	515 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	MYL10	Q9BUA6	226 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	SH2D4A	Q9H788	454 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	KAT14	Q9H8E8	782 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	HPS5	Q9UPZ3	1129 aa		13.29	□□□□□ -0.28
CIRBP-236	ENST00000592051	CD2BP2	O95400	341 aa	Known RBP	13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	PDHB	P11177	359 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	MAP2K2	P36507	400 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	AK2	P54819	239 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	FAM83B	Q5T0W9	1011 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	APOA5	Q6Q788	366 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	ANKRD23	Q86SG2	305 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	ZNF654	Q8IZM8	581 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	LPAR1	Q92633	364 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	GOPC	Q9HD26	462 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	FBXO28	Q9NVF7	368 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	TMOD4	Q9NZQ9	345 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	AGTPBP1	Q9UPW5	1226 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	MTMR7	Q9Y216	660 aa		13.28	□□□□□ -0.28
CIRBP-236	ENST00000592051	KLF18	A0A0U1RQI7	1052 aa		13.27	□□□□□ -0.29
CIRBP-236	ENST00000592051	ERICH2	A1L162	156 aa		13.27	□□□□□ -0.29
CIRBP-236	ENST00000592051	WDR46	O15213	610 aa	Known RBP	13.27	□□□□□ -0.29
CIRBP-236	ENST00000592051	RXRA	P19793	462 aa		13.27	□□□□□ -0.29
CIRBP-236	ENST00000592051	HOXA7	P31268	230 aa	Predicted RBP	13.27	□□□□□ -0.29
CIRBP-236	ENST00000592051	ZNF543	Q08ER8	600 aa		13.27	□□□□□ -0.29
CIRBP-236	ENST00000592051	GRM4	Q14833	912 aa		13.27	□□□□□ -0.29
CIRBP-236	ENST00000592051	RABEP1	Q15276	862 aa		13.27	□□□□□ -0.29
CIRBP-236	ENST00000592051	TTBK2	Q6IQ55	1244 aa		13.27	□□□□□ -0.29
CIRBP-236	ENST00000592051	CATSPERG	Q6ZRH7	1159 aa		13.27	□□□□□ -0.29
CIRBP-236	ENST00000592051	FASTKD5	Q7L8L6	764 aa	Known RBP	13.27	□□□□□ -0.29
CIRBP-236	ENST00000592051	IFNL1	Q8IU54	200 aa		13.27	□□□□□ -0.29

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