RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 CABP5Q9NP86 173 aa17.86■□□□□ 0.45
ERCC1-211ENST00000590701 A0A1W2PRG0 241 aa17.85■□□□□ 0.45
ERCC1-211ENST00000590701 STRNO43815 780 aa17.85■□□□□ 0.45
ERCC1-211ENST00000590701 IDH1O75874 414 aaKnown RBP17.85■□□□□ 0.45
ERCC1-211ENST00000590701 SHMT1P34896 483 aa17.85■□□□□ 0.45
ERCC1-211ENST00000590701 COG2Q14746 738 aa17.85■□□□□ 0.45
ERCC1-211ENST00000590701 GRIN2CQ14957 1233 aa17.85■□□□□ 0.45
ERCC1-211ENST00000590701 KIAA1755Q5JYT7 1200 aa17.85■□□□□ 0.45
ERCC1-211ENST00000590701 USP38Q8NB14 1042 aa17.85■□□□□ 0.45
ERCC1-211ENST00000590701 ARHGAP45Q92619 1136 aa17.85■□□□□ 0.45
ERCC1-211ENST00000590701 CCDC8Q9H0W5 538 aaPredicted RBP17.85■□□□□ 0.45
ERCC1-211ENST00000590701 GPR108Q9NPR9 543 aa17.85■□□□□ 0.45
ERCC1-211ENST00000590701 CT47B1P0C2W7 299 aaPredicted RBP17.84■□□□□ 0.45
ERCC1-211ENST00000590701 PLS1Q14651 629 aa17.84■□□□□ 0.45
ERCC1-211ENST00000590701 FAM47AQ5JRC9 791 aa17.84■□□□□ 0.45
ERCC1-211ENST00000590701 TTC6Q86TZ1 520 aa17.84■□□□□ 0.45
ERCC1-211ENST00000590701 MAGEB6Q8N7X4 407 aa17.84■□□□□ 0.45
ERCC1-211ENST00000590701 SYMPKQ92797 1274 aaKnown RBP17.84■□□□□ 0.45
ERCC1-211ENST00000590701 SPATC1LQ9H0A9 340 aa17.84■□□□□ 0.45
ERCC1-211ENST00000590701 EHD4Q9H223 541 aa17.84■□□□□ 0.45
ERCC1-211ENST00000590701 HOXC10Q9NYD6 342 aa17.84■□□□□ 0.45
ERCC1-211ENST00000590701 TLR7Q9NYK1 1049 aaKnown RBP17.84■□□□□ 0.45
ERCC1-211ENST00000590701 RAPGEFL1Q9UHV5 662 aa17.84■□□□□ 0.45
ERCC1-211ENST00000590701 BCAR3O75815 825 aa17.83■□□□□ 0.44
ERCC1-211ENST00000590701 OS9Q13438 667 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-211ENST00000590701 CLUAP1Q96AJ1 413 aa17.83■□□□□ 0.44
ERCC1-211ENST00000590701 ZNF512BQ96KM6 892 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-211ENST00000590701 RNPC3Q96LT9 517 aaKnown RBP17.83■□□□□ 0.44
ERCC1-211ENST00000590701 ANTXR1Q9H6X2 564 aa17.83■□□□□ 0.44
ERCC1-211ENST00000590701 DBNLQ9UJU6 430 aaKnown RBP17.83■□□□□ 0.44
ERCC1-211ENST00000590701 TACC3Q9Y6A5 838 aa17.83■□□□□ 0.44
ERCC1-211ENST00000590701 TTC28Q96AY4 2481 aa17.82■□□□□ 0.44
ERCC1-211ENST00000590701 ZNF316A6NFI3 1004 aaPredicted RBP17.82■□□□□ 0.44
ERCC1-211ENST00000590701 SURF6O75683 361 aaKnown RBP17.82■□□□□ 0.44
ERCC1-211ENST00000590701 COL9A1P20849 921 aa17.82■□□□□ 0.44
ERCC1-211ENST00000590701 POLA2Q14181 598 aa17.82■□□□□ 0.44
ERCC1-211ENST00000590701 C1orf53Q5VUE5 145 aa17.82■□□□□ 0.44
ERCC1-211ENST00000590701 NCAPG2Q86XI2 1143 aa17.82■□□□□ 0.44
ERCC1-211ENST00000590701 TANGO6Q9C0B7 1094 aa17.82■□□□□ 0.44
ERCC1-211ENST00000590701 MYO9BQ13459 2157 aa17.81■□□□□ 0.44
ERCC1-211ENST00000590701 MPHOSPH10O00566 681 aaKnown RBP17.81■□□□□ 0.44
ERCC1-211ENST00000590701 PGK1P00558 417 aa17.81■□□□□ 0.44
ERCC1-211ENST00000590701 TRIM27P14373 513 aa17.81■□□□□ 0.44
ERCC1-211ENST00000590701 SAMD1Q6SPF0 538 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-211ENST00000590701 SHCBP1Q8NEM2 672 aa17.81■□□□□ 0.44
ERCC1-211ENST00000590701 MAML3Q96JK9 1138 aa17.81■□□□□ 0.44
ERCC1-211ENST00000590701 POLR3DP05423 398 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-211ENST00000590701 CLTBP09497 229 aa17.8■□□□□ 0.44
ERCC1-211ENST00000590701 RAG1P15918 1043 aa17.8■□□□□ 0.44
ERCC1-211ENST00000590701 TAL1P17542 331 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-211ENST00000590701 DSG3P32926 999 aa17.8■□□□□ 0.44
ERCC1-211ENST00000590701 ATP8B2P98198 1209 aa17.8■□□□□ 0.44
ERCC1-211ENST00000590701 PPM1EQ8WY54 764 aa17.8■□□□□ 0.44
ERCC1-211ENST00000590701 FRAT1Q92837 279 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-211ENST00000590701 EAF2Q96CJ1 260 aaPredicted RBP17.8■□□□□ 0.44
ERCC1-211ENST00000590701 ATG4CQ96DT6 458 aa17.8■□□□□ 0.44
ERCC1-211ENST00000590701 XPNPEP3Q9NQH7 507 aa17.8■□□□□ 0.44
ERCC1-211ENST00000590701 PHF24Q9UPV7 400 aa17.8■□□□□ 0.44
ERCC1-211ENST00000590701 ZNF236Q9UL36 1845 aa17.79■□□□□ 0.44
ERCC1-211ENST00000590701 KIAA0355O15063 1070 aa17.79■□□□□ 0.44
ERCC1-211ENST00000590701 PQBP1O60828 265 aaKnown RBP17.79■□□□□ 0.44
ERCC1-211ENST00000590701 PGK2P07205 417 aa17.79■□□□□ 0.44
ERCC1-211ENST00000590701 GABPAQ06546 454 aa17.79■□□□□ 0.44
ERCC1-211ENST00000590701 TJAP1Q5JTD0 557 aa17.79■□□□□ 0.44
ERCC1-211ENST00000590701 SIAH1Q8IUQ4 282 aa17.79■□□□□ 0.44
ERCC1-211ENST00000590701 MROH8Q9H579 483 aa17.79■□□□□ 0.44
ERCC1-211ENST00000590701 TMEM39AQ9NV64 488 aa17.79■□□□□ 0.44
ERCC1-211ENST00000590701 SLC5A4Q9NY91 659 aa17.79■□□□□ 0.44
ERCC1-211ENST00000590701 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.78■□□□□ 0.44
ERCC1-211ENST00000590701 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.78■□□□□ 0.44
ERCC1-211ENST00000590701 TNFRSF10AO00220 468 aa17.78■□□□□ 0.44
ERCC1-211ENST00000590701 CLEC10AQ8IUN9 316 aa17.78■□□□□ 0.44
ERCC1-211ENST00000590701 SPICE1Q8N0Z3 855 aa17.78■□□□□ 0.44
ERCC1-211ENST00000590701 SSH3Q8TE77 659 aa17.78■□□□□ 0.44
ERCC1-211ENST00000590701 RIOK1Q9BRS2 568 aaKnown RBP17.78■□□□□ 0.44
ERCC1-211ENST00000590701 ZNF576Q9H609 170 aa17.78■□□□□ 0.44
ERCC1-211ENST00000590701 C1orf115Q9H7X2 142 aa17.78■□□□□ 0.44
ERCC1-211ENST00000590701 PLXNA1Q9UIW2 1896 aa17.78■□□□□ 0.44
ERCC1-211ENST00000590701 COL11A1P12107 1806 aaPredicted RBP17.77■□□□□ 0.44
ERCC1-211ENST00000590701 TMEM265A0A087WTH1 108 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 IGSF3O75054 1194 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 FLOT1O75955 427 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 CYP2D6P10635 497 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 RARBP10826 455 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 FCER1AP12319 257 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 DNAJB2P25686 324 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 FPGSQ05932 587 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 FAAP100Q0VG06 881 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 ABRAQ8N0Z2 381 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 SLC44A5Q8NCS7 719 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 LENG1Q96BZ8 264 aaPredicted RBP17.77■□□□□ 0.44
ERCC1-211ENST00000590701 MCM9Q9NXL9 1143 aa17.77■□□□□ 0.44
ERCC1-211ENST00000590701 A0A1W2PQ45 241 aaPredicted RBP17.76■□□□□ 0.43
ERCC1-211ENST00000590701 A0A1W2PQY0 241 aa17.76■□□□□ 0.43
ERCC1-211ENST00000590701 GRXCR1A8MXD5 290 aa17.76■□□□□ 0.43
ERCC1-211ENST00000590701 IPO8O15397 1037 aaKnown RBP17.76■□□□□ 0.43
ERCC1-211ENST00000590701 TMEM132BQ14DG7 1078 aa17.76■□□□□ 0.43
ERCC1-211ENST00000590701 TMEM57Q8N5G2 664 aa17.76■□□□□ 0.43
ERCC1-211ENST00000590701 DYNLL2Q96FJ2 89 aa17.76■□□□□ 0.43
ERCC1-211ENST00000590701 A0A0G2JMZ2 1700 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms