RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 PTCH2Q9Y6C5 1203 aa16.67■□□□□ 0.26
SCAMP4-212ENST00000590266 TSPY2A6NKD2 308 aa16.66■□□□□ 0.26
SCAMP4-212ENST00000590266 TNPO2O14787 897 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-212ENST00000590266 RANBP6O60518 1105 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-212ENST00000590266 CATSPERGQ6ZRH7 1159 aa16.66■□□□□ 0.26
SCAMP4-212ENST00000590266 VCPKMTQ9H867 229 aa16.66■□□□□ 0.26
SCAMP4-212ENST00000590266 GOPCQ9HD26 462 aa16.66■□□□□ 0.26
SCAMP4-212ENST00000590266 LOC285556D6RIA3 1793 aa16.66■□□□□ 0.26
SCAMP4-212ENST00000590266 HOXD10P28358 340 aa16.65■□□□□ 0.26
SCAMP4-212ENST00000590266 CCAR1Q8IX12 1150 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-212ENST00000590266 CHMP4CQ96CF2 233 aa16.65■□□□□ 0.26
SCAMP4-212ENST00000590266 CEP95Q96GE4 821 aa16.65■□□□□ 0.26
SCAMP4-212ENST00000590266 IL25Q9H293 177 aa16.65■□□□□ 0.26
SCAMP4-212ENST00000590266 CWC22Q9HCG8 908 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-212ENST00000590266 TXNRD2Q9NNW7 524 aa16.65■□□□□ 0.26
SCAMP4-212ENST00000590266 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
SCAMP4-212ENST00000590266 ISY1Q9ULR0 285 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-212ENST00000590266 TACC3Q9Y6A5 838 aa16.65■□□□□ 0.26
SCAMP4-212ENST00000590266 MYPNQ86TC9 1320 aa16.65■□□□□ 0.26
SCAMP4-212ENST00000590266 FLOT1O75955 427 aa16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 MYCP01106 439 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 GNRH1P01148 92 aa16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 CHMLP26374 656 aa16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 PRKCZQ05513 592 aa16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 SLC9C1Q4G0N8 1177 aa16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 LRRC47Q8N1G4 583 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 GPRC5AQ8NFJ5 357 aa16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 RAET1EQ8TD07 263 aa16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 RUFY2Q8WXA3 655 aa16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 LPAR1Q92633 364 aa16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 SRRDQ9UH36 339 aa16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.64■□□□□ 0.25
SCAMP4-212ENST00000590266 ZNF213O14771 459 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 NMT2O60551 498 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 FAM83BQ5T0W9 1011 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 WDR78Q5VTH9 848 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 TBC1D10CQ8IV04 446 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 NEDD1Q8NHV4 660 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 SH3TC2Q8TF17 1288 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 GTF3C2Q8WUA4 911 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 COA7Q96BR5 231 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 NUP88Q99567 741 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 MTMR4Q9NYA4 1195 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 NYAP2Q9P242 653 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 RBPJLQ9UBG7 517 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 GABRQQ9UN88 632 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 ZMYM6O95789 1325 aa16.63■□□□□ 0.25
SCAMP4-212ENST00000590266 PTPRFP10586 1907 aa16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 IGKV6D-41A0A0C4DH26 115 aa16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 SPDYE16A6NNV3 312 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 WDR46O15213 610 aaKnown RBP16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 TTLL1O95922 423 aa16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 ERVK-9P63128 1117 aa16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 ERVK-24P63145 666 aa16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 COG2Q14746 738 aa16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 MFSD6Q6ZSS7 791 aa16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 DSCC1Q9BVC3 393 aa16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 MORF4L1Q9UBU8 362 aa16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 MTMR7Q9Y216 660 aa16.62■□□□□ 0.25
SCAMP4-212ENST00000590266 ZSWIM8A7E2V4 1837 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 F5H6K3 240 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 PRMT2P55345 433 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 KLRC3Q07444 240 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 PLS1Q14651 629 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 IMMTQ16891 758 aaKnown RBP16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 Q3C1V9 767 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 AKNAD1Q5T1N1 836 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 POTEEQ6S8J3 1075 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 ATG4CQ96DT6 458 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 NBPF3Q9H094 633 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 FBXO28Q9NVF7 368 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 BTBD7Q9P203 1132 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 BIN2Q9UBW5 565 aaPredicted RBP16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 RABGAP1Q9Y3P9 1069 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 RAD50Q92878 1312 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 PLIN4Q96Q06 1357 aa16.61■□□□□ 0.25
SCAMP4-212ENST00000590266 ORC4O43929 436 aa16.6■□□□□ 0.25
SCAMP4-212ENST00000590266 CNMDO75829 334 aa16.6■□□□□ 0.25
SCAMP4-212ENST00000590266 NDUFB10O96000 172 aa16.6■□□□□ 0.25
SCAMP4-212ENST00000590266 FLT3LGP49771 235 aa16.6■□□□□ 0.25
SCAMP4-212ENST00000590266 STAG1Q8WVM7 1258 aa16.6■□□□□ 0.25
SCAMP4-212ENST00000590266 PORCNQ9H237 461 aa16.6■□□□□ 0.25
SCAMP4-212ENST00000590266 RNF41Q9H4P4 317 aaPredicted RBP16.6■□□□□ 0.25
SCAMP4-212ENST00000590266 HOXC10Q9NYD6 342 aa16.6■□□□□ 0.25
SCAMP4-212ENST00000590266 CTNNA3Q9UI47 895 aa16.6■□□□□ 0.25
SCAMP4-212ENST00000590266 NEDD4P46934 1319 aa16.6■□□□□ 0.25
SCAMP4-212ENST00000590266 DSG3P32926 999 aa16.59■□□□□ 0.25
SCAMP4-212ENST00000590266 CCNA1P78396 465 aa16.59■□□□□ 0.25
SCAMP4-212ENST00000590266 PTH1RQ03431 593 aa16.59■□□□□ 0.25
SCAMP4-212ENST00000590266 NBPF11Q86T75 865 aa16.59■□□□□ 0.25
SCAMP4-212ENST00000590266 IL17RBQ9NRM6 502 aa16.59■□□□□ 0.25
SCAMP4-212ENST00000590266 SGSM2O43147 1006 aa16.58■□□□□ 0.24
SCAMP4-212ENST00000590266 ELNP15502 786 aa16.58■□□□□ 0.24
SCAMP4-212ENST00000590266 MAPK4P31152 587 aa16.58■□□□□ 0.24
SCAMP4-212ENST00000590266 GRK4P32298 578 aa16.58■□□□□ 0.24
SCAMP4-212ENST00000590266 IKQ13123 557 aaPredicted RBP16.58■□□□□ 0.24
SCAMP4-212ENST00000590266 PPP4R3BQ5MIZ7 849 aa16.58■□□□□ 0.24
SCAMP4-212ENST00000590266 SLFN13Q68D06 897 aa16.58■□□□□ 0.24
SCAMP4-212ENST00000590266 ESR2Q92731 530 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms