RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ANAPC4Q9UJX5 808 aa21.73■■□□□ 1.07
DDX39A-212ENST00000590260 DOCK3Q8IZD9 2030 aa21.73■■□□□ 1.07
DDX39A-212ENST00000590260 SPDYE16A6NNV3 312 aaPredicted RBP21.72■■□□□ 1.07
DDX39A-212ENST00000590260 RGS19P49795 217 aa21.72■■□□□ 1.07
DDX39A-212ENST00000590260 FCGRTP55899 365 aa21.72■■□□□ 1.07
DDX39A-212ENST00000590260 CWC27Q6UX04 472 aaKnown RBP21.72■■□□□ 1.07
DDX39A-212ENST00000590260 SPICE1Q8N0Z3 855 aa21.72■■□□□ 1.07
DDX39A-212ENST00000590260 ARHGEF10LQ9HCE6 1279 aa21.72■■□□□ 1.07
DDX39A-212ENST00000590260 ZMYM6O95789 1325 aa21.72■■□□□ 1.07
DDX39A-212ENST00000590260 MYPNQ86TC9 1320 aa21.72■■□□□ 1.07
DDX39A-212ENST00000590260 PLIN4Q96Q06 1357 aa21.72■■□□□ 1.07
DDX39A-212ENST00000590260 RBBP6Q7Z6E9 1792 aaKnown RBP21.71■■□□□ 1.07
DDX39A-212ENST00000590260 FGRP09769 529 aa21.71■■□□□ 1.07
DDX39A-212ENST00000590260 ARHGEF6Q15052 776 aa21.71■■□□□ 1.07
DDX39A-212ENST00000590260 FAM47AQ5JRC9 791 aa21.71■■□□□ 1.07
DDX39A-212ENST00000590260 LBX2Q6XYB7 198 aa21.71■■□□□ 1.07
DDX39A-212ENST00000590260 SH3TC2Q8TF17 1288 aa21.71■■□□□ 1.07
DDX39A-212ENST00000590260 ZNF333Q96JL9 665 aa21.71■■□□□ 1.07
DDX39A-212ENST00000590260 PORCNQ9H237 461 aa21.71■■□□□ 1.07
DDX39A-212ENST00000590260 BTBD7Q9P203 1132 aa21.71■■□□□ 1.07
DDX39A-212ENST00000590260 LAMA4Q16363 1823 aa21.71■■□□□ 1.07
DDX39A-212ENST00000590260 MYH4Q9Y623 1939 aa21.7■■□□□ 1.07
DDX39A-212ENST00000590260 PRMT2P55345 433 aa21.7■■□□□ 1.06
DDX39A-212ENST00000590260 ERVK-9P63128 1117 aa21.7■■□□□ 1.06
DDX39A-212ENST00000590260 ERVK-24P63145 666 aa21.7■■□□□ 1.06
DDX39A-212ENST00000590260 NEDD1Q8NHV4 660 aa21.7■■□□□ 1.06
DDX39A-212ENST00000590260 CEP95Q96GE4 821 aa21.7■■□□□ 1.06
DDX39A-212ENST00000590260 NYAP2Q9P242 653 aa21.7■■□□□ 1.06
DDX39A-212ENST00000590260 GJD2Q9UKL4 321 aa21.7■■□□□ 1.06
DDX39A-212ENST00000590260 BRCA2P51587 3418 aa21.7■■□□□ 1.06
DDX39A-212ENST00000590260 FLT3LGP49771 235 aa21.69■■□□□ 1.06
DDX39A-212ENST00000590260 ATP2B2Q01814 1243 aa21.69■■□□□ 1.06
DDX39A-212ENST00000590260 PAGR1Q9BTK6 254 aa21.69■■□□□ 1.06
DDX39A-212ENST00000590260 MTMR4Q9NYA4 1195 aa21.69■■□□□ 1.06
DDX39A-212ENST00000590260 TNPO2O14787 897 aaKnown RBP21.68■■□□□ 1.06
DDX39A-212ENST00000590260 TFAP4Q01664 338 aa21.68■■□□□ 1.06
DDX39A-212ENST00000590260 ZNF444Q8N0Y2 327 aaPredicted RBP21.68■■□□□ 1.06
DDX39A-212ENST00000590260 GPRC5AQ8NFJ5 357 aa21.68■■□□□ 1.06
DDX39A-212ENST00000590260 LPAR1Q92633 364 aa21.68■■□□□ 1.06
DDX39A-212ENST00000590260 IL17RBQ9NRM6 502 aa21.68■■□□□ 1.06
DDX39A-212ENST00000590260 DIAPH3Q9NSV4 1193 aa21.68■■□□□ 1.06
DDX39A-212ENST00000590260 POTEFA5A3E0 1075 aa21.67■■□□□ 1.06
DDX39A-212ENST00000590260 HAND2P61296 217 aa21.67■■□□□ 1.06
DDX39A-212ENST00000590260 PDE4BQ07343 736 aa21.67■■□□□ 1.06
DDX39A-212ENST00000590260 SLC9C1Q4G0N8 1177 aa21.67■■□□□ 1.06
DDX39A-212ENST00000590260 TBC1D10CQ8IV04 446 aa21.67■■□□□ 1.06
DDX39A-212ENST00000590260 MKL1Q969V6 931 aa21.67■■□□□ 1.06
DDX39A-212ENST00000590260 FBXO28Q9NVF7 368 aa21.67■■□□□ 1.06
DDX39A-212ENST00000590260 CLIP2Q9UDT6 1046 aa21.67■■□□□ 1.06
DDX39A-212ENST00000590260 RABGAP1Q9Y3P9 1069 aa21.67■■□□□ 1.06
DDX39A-212ENST00000590260 COL11A1P12107 1806 aaPredicted RBP21.66■■□□□ 1.06
DDX39A-212ENST00000590260 WDR46O15213 610 aaKnown RBP21.66■■□□□ 1.06
DDX39A-212ENST00000590260 ORC4O43929 436 aa21.66■■□□□ 1.06
DDX39A-212ENST00000590260 NMT2O60551 498 aa21.66■■□□□ 1.06
DDX39A-212ENST00000590260 CHMLP26374 656 aa21.66■■□□□ 1.06
DDX39A-212ENST00000590260 HOXD10P28358 340 aa21.66■■□□□ 1.06
DDX39A-212ENST00000590260 DSG3P32926 999 aa21.66■■□□□ 1.06
DDX39A-212ENST00000590260 COG2Q14746 738 aa21.66■■□□□ 1.06
DDX39A-212ENST00000590260 NUP88Q99567 741 aaPredicted RBP21.66■■□□□ 1.06
DDX39A-212ENST00000590260 TANGO6Q9C0B7 1094 aa21.66■■□□□ 1.06
DDX39A-212ENST00000590260 SH2D4AQ9H788 454 aa21.66■■□□□ 1.06
DDX39A-212ENST00000590260 HIP1O00291 1037 aa21.65■■□□□ 1.06
DDX39A-212ENST00000590260 TSPY3P0CV98 308 aa21.65■■□□□ 1.06
DDX39A-212ENST00000590260 TSPY8P0CW00 308 aa21.65■■□□□ 1.06
DDX39A-212ENST00000590260 NOVP48745 357 aa21.65■■□□□ 1.06
DDX39A-212ENST00000590260 IRF5Q13568 498 aa21.65■■□□□ 1.06
DDX39A-212ENST00000590260 MTFR1Q15390 333 aa21.65■■□□□ 1.06
DDX39A-212ENST00000590260 FAM83BQ5T0W9 1011 aa21.65■■□□□ 1.06
DDX39A-212ENST00000590260 CENPQQ7L2Z9 268 aaPredicted RBP21.65■■□□□ 1.06
DDX39A-212ENST00000590260 GTF3C2Q8WUA4 911 aaPredicted RBP21.65■■□□□ 1.06
DDX39A-212ENST00000590260 ATG4CQ96DT6 458 aa21.65■■□□□ 1.06
DDX39A-212ENST00000590260 ZNF287Q9HBT7 754 aa21.65■■□□□ 1.06
DDX39A-212ENST00000590260 F5H6K3 240 aa21.64■■□□□ 1.05
DDX39A-212ENST00000590260 NDUFB10O96000 172 aa21.64■■□□□ 1.05
DDX39A-212ENST00000590260 SLC3A2P08195 630 aaKnown RBP21.64■■□□□ 1.05
DDX39A-212ENST00000590260 ELNP15502 786 aa21.64■■□□□ 1.05
DDX39A-212ENST00000590260 GRK4P32298 578 aa21.64■■□□□ 1.05
DDX39A-212ENST00000590260 KLRC3Q07444 240 aa21.64■■□□□ 1.05
DDX39A-212ENST00000590260 LRRC47Q8N1G4 583 aaKnown RBP21.64■■□□□ 1.05
DDX39A-212ENST00000590260 RAET1EQ8TD07 263 aa21.64■■□□□ 1.05
DDX39A-212ENST00000590260 USP6NLQ92738 828 aa21.64■■□□□ 1.05
DDX39A-212ENST00000590260 COA7Q96BR5 231 aa21.64■■□□□ 1.05
DDX39A-212ENST00000590260 ADAMTS5Q9UNA0 930 aa21.64■■□□□ 1.05
DDX39A-212ENST00000590260 TNRC18O15417 2968 aaPredicted RBP21.64■■□□□ 1.05
DDX39A-212ENST00000590260 MYCP01106 439 aaPredicted RBP21.63■■□□□ 1.05
DDX39A-212ENST00000590260 RASGRP2Q7LDG7 609 aa21.63■■□□□ 1.05
DDX39A-212ENST00000590260 GPR142Q7Z601 462 aa21.63■■□□□ 1.05
DDX39A-212ENST00000590260 DSCC1Q9BVC3 393 aa21.63■■□□□ 1.05
DDX39A-212ENST00000590260 GOPCQ9HD26 462 aa21.63■■□□□ 1.05
DDX39A-212ENST00000590260 NEDD4P46934 1319 aa21.62■■□□□ 1.05
DDX39A-212ENST00000590260 ADCY3O60266 1144 aa21.62■■□□□ 1.05
DDX39A-212ENST00000590260 FLOT1O75955 427 aa21.62■■□□□ 1.05
DDX39A-212ENST00000590260 TTLL1O95922 423 aa21.62■■□□□ 1.05
DDX39A-212ENST00000590260 MFAP1P55081 439 aaKnown RBP21.62■■□□□ 1.05
DDX39A-212ENST00000590260 MORN1Q5T089 497 aa21.62■■□□□ 1.05
DDX39A-212ENST00000590260 REPS2Q8NFH8 660 aa21.62■■□□□ 1.05
DDX39A-212ENST00000590260 STAG1Q8WVM7 1258 aa21.62■■□□□ 1.05
DDX39A-212ENST00000590260 MOV10L1Q9BXT6 1211 aaKnown RBP21.62■■□□□ 1.05
DDX39A-212ENST00000590260 HOXC10Q9NYD6 342 aa21.62■■□□□ 1.05
DDX39A-212ENST00000590260 MAPK4P31152 587 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms