RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 TANGO6Q9C0B7 1094 aa20.24■□□□□ 0.83
CROCCP3-203ENST00000589964 SWAP70Q9UH65 585 aa20.24■□□□□ 0.83
CROCCP3-203ENST00000589964 PARP14Q460N5 1801 aa20.24■□□□□ 0.83
CROCCP3-203ENST00000589964 PRDM1O75626 825 aa20.23■□□□□ 0.83
CROCCP3-203ENST00000589964 SAMD1Q6SPF0 538 aaPredicted RBP20.23■□□□□ 0.83
CROCCP3-203ENST00000589964 PLEKHH3Q7Z736 793 aa20.23■□□□□ 0.83
CROCCP3-203ENST00000589964 NPLOC4Q8TAT6 608 aa20.23■□□□□ 0.83
CROCCP3-203ENST00000589964 NUP88Q99567 741 aaPredicted RBP20.23■□□□□ 0.83
CROCCP3-203ENST00000589964 TMX2Q9Y320 296 aa20.23■□□□□ 0.83
CROCCP3-203ENST00000589964 TACC3Q9Y6A5 838 aa20.23■□□□□ 0.83
CROCCP3-203ENST00000589964 TRIOBPQ9H2D6 2365 aa20.23■□□□□ 0.83
CROCCP3-203ENST00000589964 MINDY4BA8MYZ0 360 aa20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 PRKAR2AP13861 404 aaKnown RBP20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 MX1P20591 662 aa20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 CCND3P30281 292 aaPredicted RBP20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 MAPK4P31152 587 aa20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 ATP2B2Q01814 1243 aa20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 CACNB2Q08289 660 aaPredicted RBP20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 WDR78Q5VTH9 848 aa20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 ZSCAN25Q6NSZ9 544 aa20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 LBX2Q6XYB7 198 aa20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 GPATCH3Q96I76 525 aa20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 NUDT12Q9BQG2 462 aa20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 MOV10L1Q9BXT6 1211 aaKnown RBP20.22■□□□□ 0.83
CROCCP3-203ENST00000589964 ROBO3Q96MS0 1386 aa20.21■□□□□ 0.83
CROCCP3-203ENST00000589964 TFRCP02786 760 aaKnown RBP20.21■□□□□ 0.83
CROCCP3-203ENST00000589964 VCPKMTQ9H867 229 aa20.21■□□□□ 0.83
CROCCP3-203ENST00000589964 INCENPQ9NQS7 918 aa20.21■□□□□ 0.83
CROCCP3-203ENST00000589964 COLQQ9Y215 455 aaPredicted RBP20.21■□□□□ 0.83
CROCCP3-203ENST00000589964 TTC41PQ6P2S7 1318 aa20.21■□□□□ 0.83
CROCCP3-203ENST00000589964 RANBP2P49792 3224 aaKnown RBP20.21■□□□□ 0.83
CROCCP3-203ENST00000589964 SBK1Q52WX2 424 aa20.2■□□□□ 0.82
CROCCP3-203ENST00000589964 HABP4Q5JVS0 413 aaKnown RBP20.2■□□□□ 0.82
CROCCP3-203ENST00000589964 ZMYM1Q5SVZ6 1142 aa20.2■□□□□ 0.82
CROCCP3-203ENST00000589964 EXOC6Q8TAG9 804 aa20.2■□□□□ 0.82
CROCCP3-203ENST00000589964 NKX2-3Q8TAU0 364 aa20.2■□□□□ 0.82
CROCCP3-203ENST00000589964 SOCS4Q8WXH5 440 aa20.2■□□□□ 0.82
CROCCP3-203ENST00000589964 PAWRQ96IZ0 340 aaKnown RBP20.2■□□□□ 0.82
CROCCP3-203ENST00000589964 GLRX3O76003 335 aaKnown RBP20.19■□□□□ 0.82
CROCCP3-203ENST00000589964 IGHDP01880 384 aa20.19■□□□□ 0.82
CROCCP3-203ENST00000589964 PTPREP23469 700 aa20.19■□□□□ 0.82
CROCCP3-203ENST00000589964 MAP2K5Q13163 448 aa20.19■□□□□ 0.82
CROCCP3-203ENST00000589964 VPS53Q5VIR6 699 aa20.19■□□□□ 0.82
CROCCP3-203ENST00000589964 TRPV1Q8NER1 839 aa20.19■□□□□ 0.82
CROCCP3-203ENST00000589964 CCDC17Q96LX7 622 aa20.19■□□□□ 0.82
CROCCP3-203ENST00000589964 APBA2Q99767 749 aa20.19■□□□□ 0.82
CROCCP3-203ENST00000589964 FSD1Q9BTV5 496 aa20.19■□□□□ 0.82
CROCCP3-203ENST00000589964 ARPP21Q9UBL0 812 aaPredicted RBP20.19■□□□□ 0.82
CROCCP3-203ENST00000589964 IGKV6D-41A0A0C4DH26 115 aa20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 FLOT1O75955 427 aa20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 IGHA2P01877 340 aa20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 XRCC5P13010 732 aaKnown RBP20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 ZKSCAN1P17029 563 aaPredicted RBP20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 DSG3P32926 999 aa20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 HDAC1Q13547 482 aaPredicted RBP20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 GRB14Q14449 540 aa20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 COG2Q14746 738 aa20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 FAM83BQ5T0W9 1011 aa20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 GTF3C2Q8WUA4 911 aaPredicted RBP20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 DPF3Q92784 378 aa20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 ARHGEF10LQ9HCE6 1279 aa20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 RPTORQ8N122 1335 aa20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 COL11A1P12107 1806 aaPredicted RBP20.18■□□□□ 0.82
CROCCP3-203ENST00000589964 COBLO75128 1261 aa20.17■□□□□ 0.82
CROCCP3-203ENST00000589964 CYP2C19P33261 490 aa20.17■□□□□ 0.82
CROCCP3-203ENST00000589964 RGS2P41220 211 aa20.17■□□□□ 0.82
CROCCP3-203ENST00000589964 PDE1AP54750 535 aa20.17■□□□□ 0.82
CROCCP3-203ENST00000589964 TMEM132BQ14DG7 1078 aa20.17■□□□□ 0.82
CROCCP3-203ENST00000589964 RASGRP2Q7LDG7 609 aa20.17■□□□□ 0.82
CROCCP3-203ENST00000589964 IFNL3Q8IZI9 196 aa20.17■□□□□ 0.82
CROCCP3-203ENST00000589964 LNPKQ9C0E8 428 aa20.17■□□□□ 0.82
CROCCP3-203ENST00000589964 SPATC1LQ9H0A9 340 aa20.17■□□□□ 0.82
CROCCP3-203ENST00000589964 HMX1Q9NP08 348 aaPredicted RBP20.17■□□□□ 0.82
CROCCP3-203ENST00000589964 APPP05067 770 aa20.16■□□□□ 0.82
CROCCP3-203ENST00000589964 ERCC3P19447 782 aa20.16■□□□□ 0.82
CROCCP3-203ENST00000589964 TDO2P48775 406 aa20.16■□□□□ 0.82
CROCCP3-203ENST00000589964 LHX8Q68G74 356 aa20.16■□□□□ 0.82
CROCCP3-203ENST00000589964 CCAR1Q8IX12 1150 aaKnown RBP20.16■□□□□ 0.82
CROCCP3-203ENST00000589964 CHMP4CQ96CF2 233 aa20.16■□□□□ 0.82
CROCCP3-203ENST00000589964 DDRGK1Q96HY6 314 aa20.16■□□□□ 0.82
CROCCP3-203ENST00000589964 FAM227BQ96M60 508 aa20.16■□□□□ 0.82
CROCCP3-203ENST00000589964 STAP2Q9UGK3 403 aa20.16■□□□□ 0.82
CROCCP3-203ENST00000589964 SLC15A5A6NIM6 579 aa20.15■□□□□ 0.82
CROCCP3-203ENST00000589964 RAD21O60216 631 aa20.15■□□□□ 0.82
CROCCP3-203ENST00000589964 ZFYP08048 801 aaPredicted RBP20.15■□□□□ 0.82
CROCCP3-203ENST00000589964 PLS1Q14651 629 aa20.15■□□□□ 0.82
CROCCP3-203ENST00000589964 FAM47AQ5JRC9 791 aa20.15■□□□□ 0.82
CROCCP3-203ENST00000589964 GIMAP6Q6P9H5 292 aa20.15■□□□□ 0.82
CROCCP3-203ENST00000589964 CHRDL2Q6WN34 429 aa20.15■□□□□ 0.82
CROCCP3-203ENST00000589964 REPS2Q8NFH8 660 aa20.15■□□□□ 0.82
CROCCP3-203ENST00000589964 LPAR1Q92633 364 aa20.15■□□□□ 0.82
CROCCP3-203ENST00000589964 KANSL2Q9H9L4 492 aa20.15■□□□□ 0.82
CROCCP3-203ENST00000589964 PFASO15067 1338 aa20.15■□□□□ 0.82
CROCCP3-203ENST00000589964 FRMPD3Q5JV73 1810 aa20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 A0A0D9SFI3 127 aa20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 PATL2C9JE40 543 aaKnown RBP20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 ERC2O15083 957 aa20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 WDR46O15213 610 aaKnown RBP20.14■□□□□ 0.81
CROCCP3-203ENST00000589964 NDUFB10O96000 172 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms