RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 PRKAR2AP13861 404 aaKnown RBP17.24■□□□□ 0.35
MBD1-220ENST00000589758 LRRFIP1Q32MZ4 808 aaKnown RBP17.24■□□□□ 0.35
MBD1-220ENST00000589758 GIMAP6Q6P9H5 292 aa17.24■□□□□ 0.35
MBD1-220ENST00000589758 PAWRQ96IZ0 340 aaKnown RBP17.24■□□□□ 0.35
MBD1-220ENST00000589758 TANGO6Q9C0B7 1094 aa17.24■□□□□ 0.35
MBD1-220ENST00000589758 BTBD7Q9P203 1132 aa17.24■□□□□ 0.35
MBD1-220ENST00000589758 TMX2Q9Y320 296 aa17.24■□□□□ 0.35
MBD1-220ENST00000589758 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
MBD1-220ENST00000589758 CHGBP05060 677 aa17.23■□□□□ 0.35
MBD1-220ENST00000589758 AKR1B1P15121 316 aa17.23■□□□□ 0.35
MBD1-220ENST00000589758 PTPREP23469 700 aa17.23■□□□□ 0.35
MBD1-220ENST00000589758 ICA1Q05084 483 aa17.23■□□□□ 0.35
MBD1-220ENST00000589758 WDR78Q5VTH9 848 aa17.23■□□□□ 0.35
MBD1-220ENST00000589758 CTR9Q6PD62 1173 aa17.23■□□□□ 0.35
MBD1-220ENST00000589758 MB21D1Q8N884 522 aa17.23■□□□□ 0.35
MBD1-220ENST00000589758 APPBP2Q92624 585 aa17.23■□□□□ 0.35
MBD1-220ENST00000589758 STRBPQ96SI9 672 aaKnown RBP17.23■□□□□ 0.35
MBD1-220ENST00000589758 CRBNQ96SW2 442 aa17.23■□□□□ 0.35
MBD1-220ENST00000589758 SUPT16HQ9Y5B9 1047 aaKnown RBP17.23■□□□□ 0.35
MBD1-220ENST00000589758 IVNS1ABPQ9Y6Y0 642 aa17.23■□□□□ 0.35
MBD1-220ENST00000589758 TTC41PQ6P2S7 1318 aa17.22■□□□□ 0.35
MBD1-220ENST00000589758 ERC2O15083 957 aa17.22■□□□□ 0.35
MBD1-220ENST00000589758 EVI5O60447 810 aa17.22■□□□□ 0.35
MBD1-220ENST00000589758 SBK1Q52WX2 424 aa17.22■□□□□ 0.35
MBD1-220ENST00000589758 SIAH1Q8IUQ4 282 aa17.22■□□□□ 0.35
MBD1-220ENST00000589758 VCPKMTQ9H867 229 aa17.22■□□□□ 0.35
MBD1-220ENST00000589758 KANSL2Q9H9L4 492 aa17.22■□□□□ 0.35
MBD1-220ENST00000589758 OGDHLQ9ULD0 1010 aa17.22■□□□□ 0.35
MBD1-220ENST00000589758 RNF113AO15541 343 aaKnown RBP17.21■□□□□ 0.35
MBD1-220ENST00000589758 HOXC6P09630 235 aa17.21■□□□□ 0.35
MBD1-220ENST00000589758 CACNB2Q08289 660 aaPredicted RBP17.21■□□□□ 0.35
MBD1-220ENST00000589758 GRB14Q14449 540 aa17.21■□□□□ 0.35
MBD1-220ENST00000589758 CCL14Q16627 93 aa17.21■□□□□ 0.35
MBD1-220ENST00000589758 MFSD14CQ5VZR4 134 aa17.21■□□□□ 0.35
MBD1-220ENST00000589758 PCDHB15Q9Y5E8 787 aa17.21■□□□□ 0.35
MBD1-220ENST00000589758 SMIM22K7EJ46 135 aa17.2■□□□□ 0.34
MBD1-220ENST00000589758 WDR46O15213 610 aaKnown RBP17.2■□□□□ 0.34
MBD1-220ENST00000589758 STRNO43815 780 aa17.2■□□□□ 0.34
MBD1-220ENST00000589758 FLOT1O75955 427 aa17.2■□□□□ 0.34
MBD1-220ENST00000589758 GNAT2P19087 354 aa17.2■□□□□ 0.34
MBD1-220ENST00000589758 DSG3P32926 999 aa17.2■□□□□ 0.34
MBD1-220ENST00000589758 KIAA1755Q5JYT7 1200 aa17.2■□□□□ 0.34
MBD1-220ENST00000589758 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
MBD1-220ENST00000589758 SHCBP1Q8NEM2 672 aa17.2■□□□□ 0.34
MBD1-220ENST00000589758 OSBP2Q969R2 916 aa17.2■□□□□ 0.34
MBD1-220ENST00000589758 NBPF3Q9H094 633 aa17.2■□□□□ 0.34
MBD1-220ENST00000589758 SPATC1LQ9H0A9 340 aa17.2■□□□□ 0.34
MBD1-220ENST00000589758 GSG1L2A8MUP6 293 aa17.19■□□□□ 0.34
MBD1-220ENST00000589758 GPAA1O43292 621 aa17.19■□□□□ 0.34
MBD1-220ENST00000589758 EEF2P13639 858 aaKnown RBP17.19■□□□□ 0.34
MBD1-220ENST00000589758 ATP2B2Q01814 1243 aa17.19■□□□□ 0.34
MBD1-220ENST00000589758 TSHZ3Q63HK5 1081 aa17.19■□□□□ 0.34
MBD1-220ENST00000589758 CLEC10AQ8IUN9 316 aa17.19■□□□□ 0.34
MBD1-220ENST00000589758 DIS3LQ8TF46 1054 aaKnown RBP17.19■□□□□ 0.34
MBD1-220ENST00000589758 MOV10L1Q9BXT6 1211 aaKnown RBP17.19■□□□□ 0.34
MBD1-220ENST00000589758 C11orf49Q9H6J7 331 aa17.19■□□□□ 0.34
MBD1-220ENST00000589758 GOPCQ9HD26 462 aa17.19■□□□□ 0.34
MBD1-220ENST00000589758 CCND3P30281 292 aaPredicted RBP17.18■□□□□ 0.34
MBD1-220ENST00000589758 FXR1P51114 621 aaKnown RBP eCLIP17.18■□□□□ 0.34
MBD1-220ENST00000589758 DPP9Q86TI2 863 aa17.18■□□□□ 0.34
MBD1-220ENST00000589758 SPICE1Q8N0Z3 855 aa17.18■□□□□ 0.34
MBD1-220ENST00000589758 MROH8Q9H579 483 aa17.18■□□□□ 0.34
MBD1-220ENST00000589758 MKNK2Q9HBH9 465 aa17.18■□□□□ 0.34
MBD1-220ENST00000589758 ZNF287Q9HBT7 754 aa17.18■□□□□ 0.34
MBD1-220ENST00000589758 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
MBD1-220ENST00000589758 A0A0G2JMZ2 1700 aa17.18■□□□□ 0.34
MBD1-220ENST00000589758 RLFQ13129 1914 aa17.17■□□□□ 0.34
MBD1-220ENST00000589758 ROBO3Q96MS0 1386 aa17.17■□□□□ 0.34
MBD1-220ENST00000589758 MINDY4BA8MYZ0 360 aa17.17■□□□□ 0.34
MBD1-220ENST00000589758 TDO2P48775 406 aa17.17■□□□□ 0.34
MBD1-220ENST00000589758 MNX1P50219 401 aaPredicted RBP17.17■□□□□ 0.34
MBD1-220ENST00000589758 PI4K2BQ8TCG2 481 aa17.17■□□□□ 0.34
MBD1-220ENST00000589758 SLC5A4Q9NY91 659 aa17.17■□□□□ 0.34
MBD1-220ENST00000589758 FLRT1Q9NZU1 646 aa17.17■□□□□ 0.34
MBD1-220ENST00000589758 RBM27Q9P2N5 1060 aaKnown RBP17.17■□□□□ 0.34
MBD1-220ENST00000589758 PATL2C9JE40 543 aaKnown RBP17.16■□□□□ 0.34
MBD1-220ENST00000589758 MSCO60682 206 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 APPP05067 770 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 ERCC3P19447 782 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 RASA1P20936 1047 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 PLS1Q14651 629 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 LHX8Q68G74 356 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 ABRAQ8N0Z2 381 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 NPLOC4Q8TAT6 608 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 ATG4CQ96DT6 458 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 NACAP1Q9BZK3 213 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 ADAMTS5Q9UNA0 930 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 ZNF236Q9UL36 1845 aa17.16■□□□□ 0.34
MBD1-220ENST00000589758 SLC25A27O95847 323 aa17.15■□□□□ 0.34
MBD1-220ENST00000589758 ADORA2AP29274 412 aa17.15■□□□□ 0.34
MBD1-220ENST00000589758 OLFML2BQ68BL8 750 aa17.15■□□□□ 0.34
MBD1-220ENST00000589758 NCAPG2Q86XI2 1143 aa17.15■□□□□ 0.34
MBD1-220ENST00000589758 ZNF444Q8N0Y2 327 aaPredicted RBP17.15■□□□□ 0.34
MBD1-220ENST00000589758 FSD1Q9BTV5 496 aa17.15■□□□□ 0.34
MBD1-220ENST00000589758 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
MBD1-220ENST00000589758 PRO3102Q9H379 93 aa17.15■□□□□ 0.34
MBD1-220ENST00000589758 NYAP2Q9P242 653 aa17.15■□□□□ 0.34
MBD1-220ENST00000589758 GREB1LQ9C091 1923 aaPredicted RBP17.14■□□□□ 0.33
MBD1-220ENST00000589758 A0A1W2PPC1 479 aa17.14■□□□□ 0.33
MBD1-220ENST00000589758 M0R2C6 588 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms