RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 ANKRD1Q15327 319 aa14.27□□□□□ -0.13
DNMT1-218ENST00000589294 FASTKD5Q7L8L6 764 aaKnown RBP14.27□□□□□ -0.13
DNMT1-218ENST00000589294 SGMS1Q86VZ5 419 aa14.27□□□□□ -0.13
DNMT1-218ENST00000589294 CLEC10AQ8IUN9 316 aa14.27□□□□□ -0.13
DNMT1-218ENST00000589294 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
DNMT1-218ENST00000589294 GMCL1P1Q8NEA9 526 aa14.27□□□□□ -0.13
DNMT1-218ENST00000589294 LPAR1Q92633 364 aa14.27□□□□□ -0.13
DNMT1-218ENST00000589294 FEZ1Q99689 392 aa14.27□□□□□ -0.13
DNMT1-218ENST00000589294 AGXT2Q9BYV1 514 aa14.27□□□□□ -0.13
DNMT1-218ENST00000589294 KAT14Q9H8E8 782 aa14.27□□□□□ -0.13
DNMT1-218ENST00000589294 LY9Q9HBG7 655 aa14.27□□□□□ -0.13
DNMT1-218ENST00000589294 GOPCQ9HD26 462 aa14.27□□□□□ -0.13
DNMT1-218ENST00000589294 GREB1LQ9C091 1923 aaPredicted RBP14.27□□□□□ -0.13
DNMT1-218ENST00000589294 A0A0G2JLL6 359 aaPredicted RBP14.26□□□□□ -0.13
DNMT1-218ENST00000589294 MANSC4A6NHS7 340 aaPredicted RBP14.26□□□□□ -0.13
DNMT1-218ENST00000589294 F5H6K3 240 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 KLRC3Q07444 240 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 NOGQ13253 232 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 MTMR2Q13614 643 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 Q6ZUG5 572 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 PRRT2Q7Z6L0 340 aaPredicted RBP14.26□□□□□ -0.13
DNMT1-218ENST00000589294 PROCA1Q8NCQ7 364 aaPredicted RBP14.26□□□□□ -0.13
DNMT1-218ENST00000589294 PNMA1Q8ND90 353 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 MS4A4AQ96JQ5 239 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 C12orf42Q96LP6 360 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 LRRC2Q9BYS8 371 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 VCPKMTQ9H867 229 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 EMILIN3Q9NT22 766 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 TMOD4Q9NZQ9 345 aa14.26□□□□□ -0.13
DNMT1-218ENST00000589294 OTOFQ9HC10 1997 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 TESPA1A2RU30 521 aaPredicted RBP14.25□□□□□ -0.13
DNMT1-218ENST00000589294 CCDC69A6NI79 296 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 HMGCS2P54868 508 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 EVCP57679 992 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 CYP4F22Q6NT55 531 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 SYNE3Q6ZMZ3 975 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 NFXL1Q6ZNB6 911 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 CATIPQ7Z7H3 387 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 GMCL1Q96IK5 515 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 CAPNS2Q96L46 248 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 TCEANC2Q96MN5 208 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 MAP3K14Q99558 947 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 GPHNQ9NQX3 736 aaPredicted RBP14.25□□□□□ -0.13
DNMT1-218ENST00000589294 ATAD5Q96QE3 1844 aa14.25□□□□□ -0.13
DNMT1-218ENST00000589294 NDUFB10O96000 172 aa14.24□□□□□ -0.13
DNMT1-218ENST00000589294 CALM1P0DP23 149 aa14.24□□□□□ -0.13
DNMT1-218ENST00000589294 CALM2P0DP24 149 aa14.24□□□□□ -0.13
DNMT1-218ENST00000589294 CALM3P0DP25 149 aa14.24□□□□□ -0.13
DNMT1-218ENST00000589294 MAP2K2P36507 400 aa14.24□□□□□ -0.13
DNMT1-218ENST00000589294 SLFN13Q68D06 897 aa14.24□□□□□ -0.13
DNMT1-218ENST00000589294 PAXIP1Q6ZW49 1069 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-218ENST00000589294 LRRC47Q8N1G4 583 aaKnown RBP14.24□□□□□ -0.13
DNMT1-218ENST00000589294 DCAF4Q8WV16 495 aa14.24□□□□□ -0.13
DNMT1-218ENST00000589294 BRF1Q92994 677 aa14.24□□□□□ -0.13
DNMT1-218ENST00000589294 SLC12A7Q9Y666 1083 aa14.24□□□□□ -0.13
DNMT1-218ENST00000589294 WDR33Q9C0J8 1336 aaKnown RBP14.23□□□□□ -0.13
DNMT1-218ENST00000589294 WDR46O15213 610 aaKnown RBP14.23□□□□□ -0.13
DNMT1-218ENST00000589294 ST18O60284 1047 aa14.23□□□□□ -0.13
DNMT1-218ENST00000589294 SNHG28P0DPA3 235 aa14.23□□□□□ -0.13
DNMT1-218ENST00000589294 HOXA7P31268 230 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-218ENST00000589294 TM4SF4P48230 202 aa14.23□□□□□ -0.13
DNMT1-218ENST00000589294 RCAN1P53805 252 aa14.23□□□□□ -0.13
DNMT1-218ENST00000589294 SREBF2Q12772 1141 aa14.23□□□□□ -0.13
DNMT1-218ENST00000589294 TROAPQ12815 778 aa14.23□□□□□ -0.13
DNMT1-218ENST00000589294 PABPC4Q13310 644 aaKnown RBP eCLIP14.23□□□□□ -0.13
DNMT1-218ENST00000589294 MOGSQ13724 837 aa14.23□□□□□ -0.13
DNMT1-218ENST00000589294 TOB2Q14106 344 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-218ENST00000589294 PPP2R5BQ15173 497 aa14.23□□□□□ -0.13
DNMT1-218ENST00000589294 ZYXQ15942 572 aaKnown RBP14.23□□□□□ -0.13
DNMT1-218ENST00000589294 ZNF274Q96GC6 653 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-218ENST00000589294 SENP2Q9HC62 589 aa14.23□□□□□ -0.13
DNMT1-218ENST00000589294 SLC45A1Q9Y2W3 748 aa14.23□□□□□ -0.13
DNMT1-218ENST00000589294 PHIPQ8WWQ0 1821 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 CCL15-CCL14A0A0B4J2E2 113 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 DDAH1O94760 285 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 BMP3P12645 472 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 SLC1A4P43007 532 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 MCM2P49736 904 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 VEGFBP49765 207 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 AK2P54819 239 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 HTRA3P83110 453 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 KIF23Q02241 960 aaPredicted RBP14.22□□□□□ -0.13
DNMT1-218ENST00000589294 MKRN3Q13064 507 aaKnown RBP14.22□□□□□ -0.13
DNMT1-218ENST00000589294 CCL15Q16663 113 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 KIAA1755Q5JYT7 1200 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 GPATCH4Q5T3I0 446 aaKnown RBP14.22□□□□□ -0.13
DNMT1-218ENST00000589294 OTUD7BQ6GQQ9 843 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 GADL1Q6ZQY3 521 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 ANKRD23Q86SG2 305 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 ZNF654Q8IZM8 581 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 BRI3BPQ8WY22 251 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 ZCCHC17Q9NP64 241 aaKnown RBP14.22□□□□□ -0.13
DNMT1-218ENST00000589294 BRPF3Q9ULD4 1205 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 AGTPBP1Q9UPW5 1226 aa14.22□□□□□ -0.13
DNMT1-218ENST00000589294 KLF18A0A0U1RQI7 1052 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 USP17L15C9J2P7 530 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 USP17L13C9JLJ4 530 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 USP17L11C9JVI0 530 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 USP17L18D6R9N7 530 aa14.21□□□□□ -0.13
DNMT1-218ENST00000589294 USP17L22D6RA61 530 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms