RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 TSPY8P0CW00 308 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 TFAP4Q01664 338 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 PRKCZQ05513 592 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 FAM47AQ5JRC9 791 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 KIAA1755Q5JYT7 1200 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 CENPQQ7L2Z9 268 aaPredicted RBP16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 LPAR1Q92633 364 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 COA7Q96BR5 231 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 GOPCQ9HD26 462 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 TXNRD2Q9NNW7 524 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 INCENPQ9NQS7 918 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 RBPJLQ9UBG7 517 aa16.75■□□□□ 0.27
CLPTM1-210ENST00000589158 NBPF11Q86T75 865 aa16.74■□□□□ 0.27
CLPTM1-210ENST00000589158 CCAR1Q8IX12 1150 aaKnown RBP16.74■□□□□ 0.27
CLPTM1-210ENST00000589158 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
CLPTM1-210ENST00000589158 NYAP2Q9P242 653 aa16.74■□□□□ 0.27
CLPTM1-210ENST00000589158 CLIP2Q9UDT6 1046 aa16.74■□□□□ 0.27
CLPTM1-210ENST00000589158 ANAPC4Q9UJX5 808 aa16.74■□□□□ 0.27
CLPTM1-210ENST00000589158 GABRQQ9UN88 632 aa16.74■□□□□ 0.27
CLPTM1-210ENST00000589158 HAND2P61296 217 aa16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 ERVK-9P63128 1117 aa16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 ERVK-24P63145 666 aa16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 COG2Q14746 738 aa16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 NEDD1Q8NHV4 660 aa16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 SH3TC2Q8TF17 1288 aa16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 ARMC5Q96C12 935 aa16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 CEP95Q96GE4 821 aa16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 HOXC10Q9NYD6 342 aa16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 RABGAP1Q9Y3P9 1069 aa16.73■□□□□ 0.27
CLPTM1-210ENST00000589158 IGKV6D-41A0A0C4DH26 115 aa16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 TSPY2A6NKD2 308 aa16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 SPDYE16A6NNV3 312 aaPredicted RBP16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 WDR46O15213 610 aaKnown RBP16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 RANBP6O60518 1105 aaKnown RBP16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 FLOT1O75955 427 aa16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 MYCP01106 439 aaPredicted RBP16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 FLT3LGP49771 235 aa16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 Q3C1V9 767 aa16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 RRP12Q5JTH9 1297 aaKnown RBP16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 CCDC136Q96JN2 1154 aa16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 CWC22Q9HCG8 908 aaKnown RBP16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 MTMR4Q9NYA4 1195 aa16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 BIN2Q9UBW5 565 aaPredicted RBP16.72■□□□□ 0.27
CLPTM1-210ENST00000589158 ZMYM6O95789 1325 aa16.71■□□□□ 0.27
CLPTM1-210ENST00000589158 TTLL1O95922 423 aa16.71■□□□□ 0.27
CLPTM1-210ENST00000589158 GRK4P32298 578 aa16.71■□□□□ 0.27
CLPTM1-210ENST00000589158 CCNA1P78396 465 aa16.71■□□□□ 0.27
CLPTM1-210ENST00000589158 POTEEQ6S8J3 1075 aa16.71■□□□□ 0.27
CLPTM1-210ENST00000589158 TACC3Q9Y6A5 838 aa16.71■□□□□ 0.27
CLPTM1-210ENST00000589158 ZSWIM8A7E2V4 1837 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 F5H6K3 240 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 ZNF213O14771 459 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 CNMDO75829 334 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 CHMLP26374 656 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 MAPK4P31152 587 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 DSG3P32926 999 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 KLRC3Q07444 240 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 FAM83BQ5T0W9 1011 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 WDR78Q5VTH9 848 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 LBX2Q6XYB7 198 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 LRRC47Q8N1G4 583 aaKnown RBP16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 RUFY2Q8WXA3 655 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 MKL1Q969V6 931 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 ZNF333Q96JL9 665 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 PORCNQ9H237 461 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 BTBD7Q9P203 1132 aa16.7■□□□□ 0.26
CLPTM1-210ENST00000589158 PLIN4Q96Q06 1357 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 ORC4O43929 436 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 ADCY3O60266 1144 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 NDUFB10O96000 172 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 PPP4R3BQ5MIZ7 849 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 MFSD6Q6ZSS7 791 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 SLAIN1Q8ND83 568 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 ATG4CQ96DT6 458 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 NUP88Q99567 741 aaPredicted RBP16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 DSCC1Q9BVC3 393 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 TMEM106CQ9BVX2 250 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 STX8Q9UNK0 236 aa16.69■□□□□ 0.26
CLPTM1-210ENST00000589158 NMT2O60551 498 aa16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 FGRP09769 529 aa16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 IRF5Q13568 498 aa16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 PLS1Q14651 629 aa16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 AKNAD1Q5T1N1 836 aa16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 PLEKHH3Q7Z736 793 aa16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 IL25Q9H293 177 aa16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 RNF41Q9H4P4 317 aaPredicted RBP16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 FBXO28Q9NVF7 368 aa16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 CTNNA3Q9UI47 895 aa16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 ISY1Q9ULR0 285 aaKnown RBP16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 RAD50Q92878 1312 aa16.68■□□□□ 0.26
CLPTM1-210ENST00000589158 HTTP42858 3142 aa16.67■□□□□ 0.26
CLPTM1-210ENST00000589158 ELNP15502 786 aa16.67■□□□□ 0.26
CLPTM1-210ENST00000589158 UBXN2AP68543 259 aa16.67■□□□□ 0.26
CLPTM1-210ENST00000589158 IMMTQ16891 758 aaKnown RBP16.67■□□□□ 0.26
CLPTM1-210ENST00000589158 SLFN13Q68D06 897 aa16.67■□□□□ 0.26
CLPTM1-210ENST00000589158 GPR142Q7Z601 462 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms