RNA–Protein interactions for RNA: ENST00000588858.5

C19orf53-204, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 3

Gene C19orf53, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-204ENST00000588858 CAPNS2Q96L46 248 aa9.5□□□□□ -0.89
C19orf53-204ENST00000588858 JAKMIP1Q96N16 626 aaKnown RBP9.5□□□□□ -0.89
C19orf53-204ENST00000588858 CFHR5Q9BXR6 569 aa9.5□□□□□ -0.89
C19orf53-204ENST00000588858 VCPKMTQ9H867 229 aa9.5□□□□□ -0.89
C19orf53-204ENST00000588858 TOMM22Q9NS69 142 aa9.5□□□□□ -0.89
C19orf53-204ENST00000588858 CYP46A1Q9Y6A2 500 aa9.5□□□□□ -0.89
C19orf53-204ENST00000588858 MYPNQ86TC9 1320 aa9.5□□□□□ -0.89
C19orf53-204ENST00000588858 NID2Q14112 1375 aa9.5□□□□□ -0.89
C19orf53-204ENST00000588858 PTPRFP10586 1907 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 ERICH2A1L162 156 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 IFIT3O14879 490 aaKnown RBP9.49□□□□□ -0.89
C19orf53-204ENST00000588858 WDR46O15213 610 aaKnown RBP9.49□□□□□ -0.89
C19orf53-204ENST00000588858 SREBF2Q12772 1141 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 PPP2R5BQ15173 497 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 RRP12Q5JTH9 1297 aaKnown RBP9.49□□□□□ -0.89
C19orf53-204ENST00000588858 LBX2Q6XYB7 198 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 ANKRD23Q86SG2 305 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 ACER1Q8TDN7 264 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 TMEM47Q9BQJ4 181 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 LY9Q9HBG7 655 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 GOPCQ9HD26 462 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 EMILIN3Q9NT22 766 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 CLIP2Q9UDT6 1046 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 AGTPBP1Q9UPW5 1226 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 LOC285556D6RIA3 1793 aa9.49□□□□□ -0.89
C19orf53-204ENST00000588858 WDR33Q9C0J8 1336 aaKnown RBP9.49□□□□□ -0.89
C19orf53-204ENST00000588858 F5H6K3 240 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 NMT2O60551 498 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 DDAH1O94760 285 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 ALDH1A1P00352 501 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 CASTP20810 708 aaKnown RBP9.48□□□□□ -0.89
C19orf53-204ENST00000588858 KLRC3Q07444 240 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 TROAPQ12815 778 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 PABPC4Q13310 644 aaKnown RBP eCLIP9.48□□□□□ -0.892e-7■■■□□ 16
C19orf53-204ENST00000588858 MTMR2Q13614 643 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 COL9A3Q14050 684 aaPredicted RBP9.48□□□□□ -0.89
C19orf53-204ENST00000588858 WTAPQ15007 396 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 RABEP1Q15276 862 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 ANKRD1Q15327 319 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 TMEM67Q5HYA8 995 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 GPATCH4Q5T3I0 446 aaKnown RBP9.48□□□□□ -0.89
C19orf53-204ENST00000588858 IFIT1BQ5T764 474 aaKnown RBP9.48□□□□□ -0.89
C19orf53-204ENST00000588858 CYP4F22Q6NT55 531 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 BTNL9Q6UXG8 535 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 STK11IPQ8N1F8 1099 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 DNAJC5GQ8N7S2 189 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 PNMA1Q8ND90 353 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 DCAF4Q8WV16 495 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 BRI3BPQ8WY22 251 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 STX8Q9UNK0 236 aa9.48□□□□□ -0.89
C19orf53-204ENST00000588858 CCL15-CCL14A0A0B4J2E2 113 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 TRIM75PA6NK02 468 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 NDUFB10O96000 172 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 CALM1P0DP23 149 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 CALM2P0DP24 149 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 CALM3P0DP25 149 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 FDX1P10109 184 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 VCAM1P19320 739 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 SMARCA1P28370 1054 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 VEGFBP49765 207 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 HMGCS2P54868 508 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 CCL15Q16663 113 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 NOM1Q5C9Z4 860 aaKnown RBP9.47□□□□□ -0.89
C19orf53-204ENST00000588858 OTUD7BQ6GQQ9 843 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 GPAT2Q6NUI2 795 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 CCDC84Q86UT8 332 aaPredicted RBP9.47□□□□□ -0.89
C19orf53-204ENST00000588858 CLEC10AQ8IUN9 316 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 GTF3C2Q8WUA4 911 aaPredicted RBP9.47□□□□□ -0.89
C19orf53-204ENST00000588858 ZNF274Q96GC6 653 aaPredicted RBP9.47□□□□□ -0.89
C19orf53-204ENST00000588858 KAT14Q9H8E8 782 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 TMOD4Q9NZQ9 345 aa9.47□□□□□ -0.89
C19orf53-204ENST00000588858 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.47□□□□□ -0.89
C19orf53-204ENST00000588858 USP17L15C9J2P7 530 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 USP17L11C9JVI0 530 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 USP17L18D6R9N7 530 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 USP17L22D6RA61 530 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 USP17L19D6RCP7 530 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 USP17L20D6RJB6 530 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 PDHBP11177 359 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 KIF23Q02241 960 aaPredicted RBP9.46□□□□□ -0.9
C19orf53-204ENST00000588858 USP17L24Q0WX57 530 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 TOB2Q14106 344 aaPredicted RBP9.46□□□□□ -0.9
C19orf53-204ENST00000588858 ASPRV1Q53RT3 343 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 APOA5Q6Q788 366 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 CATSPERGQ6ZRH7 1159 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 Q6ZUG5 572 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 CATIPQ7Z7H3 387 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 IFNL1Q8IU54 200 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 JMYQ8N9B5 988 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 FEZ1Q99689 392 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 PTPN18Q99952 460 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 ZKSCAN3Q9BRR0 538 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 PDRG1Q9NUG6 133 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 SAGE1Q9NXZ1 904 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 PNMA3Q9UL41 463 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 ADAMTS5Q9UNA0 930 aa9.46□□□□□ -0.9
C19orf53-204ENST00000588858 MYH4Q9Y623 1939 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms