RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ATP2B2Q01814 1243 aa25.9■■□□□ 1.74
ATG4D-209ENST00000588857 TRIM22Q8IYM9 498 aa25.9■■□□□ 1.74
ATG4D-209ENST00000588857 ZC3H15Q8WU90 426 aaKnown RBP25.9■■□□□ 1.74
ATG4D-209ENST00000588857 BRD1O95696 1058 aa25.89■■□□□ 1.73
ATG4D-209ENST00000588857 GH2P01242 217 aa25.89■■□□□ 1.73
ATG4D-209ENST00000588857 SSRP1Q08945 709 aaKnown RBP25.89■■□□□ 1.73
ATG4D-209ENST00000588857 SEPT2Q15019 361 aa25.89■■□□□ 1.73
ATG4D-209ENST00000588857 CLEC10AQ8IUN9 316 aa25.89■■□□□ 1.73
ATG4D-209ENST00000588857 PHKBQ93100 1093 aa25.89■■□□□ 1.73
ATG4D-209ENST00000588857 DCPSQ96C86 337 aaKnown RBP25.89■■□□□ 1.73
ATG4D-209ENST00000588857 FDPSP14324 419 aaKnown RBP25.88■■□□□ 1.73
ATG4D-209ENST00000588857 RRP1BQ14684 758 aaKnown RBP25.88■■□□□ 1.73
ATG4D-209ENST00000588857 GRM4Q14833 912 aa25.88■■□□□ 1.73
ATG4D-209ENST00000588857 SHROOM1Q2M3G4 852 aaPredicted RBP25.88■■□□□ 1.73
ATG4D-209ENST00000588857 TNPO1Q92973 898 aaKnown RBP25.88■■□□□ 1.73
ATG4D-209ENST00000588857 SLC26A6Q9BXS9 759 aa25.88■■□□□ 1.73
ATG4D-209ENST00000588857 MTMR7Q9Y216 660 aa25.88■■□□□ 1.73
ATG4D-209ENST00000588857 ZDHHC9Q9Y397 364 aa25.88■■□□□ 1.73
ATG4D-209ENST00000588857 ATAD5Q96QE3 1844 aa25.88■■□□□ 1.73
ATG4D-209ENST00000588857 VPS37CA5D8V6 355 aaPredicted RBP25.87■■□□□ 1.73
ATG4D-209ENST00000588857 ICA1Q05084 483 aa25.87■■□□□ 1.73
ATG4D-209ENST00000588857 NBPF12Q5TAG4 269 aaPredicted RBP25.87■■□□□ 1.73
ATG4D-209ENST00000588857 DCAF15Q66K64 600 aa25.87■■□□□ 1.73
ATG4D-209ENST00000588857 LRRC47Q8N1G4 583 aaKnown RBP25.87■■□□□ 1.73
ATG4D-209ENST00000588857 NYAP2Q9P242 653 aa25.87■■□□□ 1.73
ATG4D-209ENST00000588857 STK36Q9NRP7 1315 aa25.87■■□□□ 1.73
ATG4D-209ENST00000588857 H3BQV1 296 aa25.86■■□□□ 1.73
ATG4D-209ENST00000588857 FMNL1O95466 1100 aaPredicted RBP25.86■■□□□ 1.73
ATG4D-209ENST00000588857 GUCY1A2P33402 732 aa25.86■■□□□ 1.73
ATG4D-209ENST00000588857 GNAQP50148 359 aa25.86■■□□□ 1.73
ATG4D-209ENST00000588857 IFFO2Q5TF58 517 aa25.86■■□□□ 1.73
ATG4D-209ENST00000588857 FOXD4L5Q5VV16 416 aaPredicted RBP25.86■■□□□ 1.73
ATG4D-209ENST00000588857 TMTC3Q6ZXV5 915 aa25.86■■□□□ 1.73
ATG4D-209ENST00000588857 CMTR1Q8N1G2 835 aaKnown RBP25.86■■□□□ 1.73
ATG4D-209ENST00000588857 CCDC82Q8N4S0 544 aa25.86■■□□□ 1.73
ATG4D-209ENST00000588857 FOXD4L4Q8WXT5 416 aaPredicted RBP25.86■■□□□ 1.73
ATG4D-209ENST00000588857 ZSCAN22P10073 491 aaPredicted RBP25.86■■□□□ 1.73
ATG4D-209ENST00000588857 EEF2P13639 858 aaKnown RBP25.86■■□□□ 1.73
ATG4D-209ENST00000588857 CAP2P40123 477 aa25.86■■□□□ 1.73
ATG4D-209ENST00000588857 SULF1Q8IWU6 871 aa25.86■■□□□ 1.73
ATG4D-209ENST00000588857 WASF1Q92558 559 aa25.86■■□□□ 1.73
ATG4D-209ENST00000588857 CREBZFQ9NS37 354 aa25.86■■□□□ 1.73
ATG4D-209ENST00000588857 PLEKHA8P1O95397 391 aa25.85■■□□□ 1.73
ATG4D-209ENST00000588857 JAG1P78504 1218 aa25.85■■□□□ 1.73
ATG4D-209ENST00000588857 AKAP17AQ02040 695 aaKnown RBP25.85■■□□□ 1.73
ATG4D-209ENST00000588857 NBPF11Q86T75 865 aa25.85■■□□□ 1.73
ATG4D-209ENST00000588857 MKL1Q969V6 931 aa25.85■■□□□ 1.73
ATG4D-209ENST00000588857 ZBTB21Q9ULJ3 1066 aa25.85■■□□□ 1.73
ATG4D-209ENST00000588857 MTMR6Q9Y217 621 aa25.85■■□□□ 1.73
ATG4D-209ENST00000588857 PARP1P09874 1014 aaKnown RBP25.84■■□□□ 1.73
ATG4D-209ENST00000588857 SUPT20HL1Q3ZLR7 823 aa25.84■■□□□ 1.73
ATG4D-209ENST00000588857 MAD2L2Q9UI95 211 aa25.84■■□□□ 1.73
ATG4D-209ENST00000588857 PHF20L1A8MW92 1017 aa25.83■■□□□ 1.73
ATG4D-209ENST00000588857 PRAMEF18Q5VWM3 479 aa25.83■■□□□ 1.73
ATG4D-209ENST00000588857 KLRG1Q96E93 195 aa25.83■■□□□ 1.73
ATG4D-209ENST00000588857 C8orf76Q96K31 380 aa25.83■■□□□ 1.73
ATG4D-209ENST00000588857 LZTS2Q9BRK4 669 aa25.83■■□□□ 1.73
ATG4D-209ENST00000588857 RNF26Q9BY78 433 aaPredicted RBP25.83■■□□□ 1.73
ATG4D-209ENST00000588857 ZNF341Q9BYN7 854 aa25.83■■□□□ 1.73
ATG4D-209ENST00000588857 BAZ2BQ9UIF8 2168 aaKnown RBP25.83■■□□□ 1.73
ATG4D-209ENST00000588857 PALM3A6NDB9 673 aaPredicted RBP25.82■■□□□ 1.72
ATG4D-209ENST00000588857 TMEM88BA6NKF7 163 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 ASNSP08243 561 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 FOSBP53539 338 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 SRBD1Q8N5C6 995 aaKnown RBP25.82■■□□□ 1.72
ATG4D-209ENST00000588857 ALG1Q9BT22 464 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 ARHGEF10LQ9HCE6 1279 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 USP17L5A8MUK1 530 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 DEXIO95424 95 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 PDHBP11177 359 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 FUT2Q10981 343 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 USP17L2Q6R6M4 530 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 SIAH1Q8IUQ4 282 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 STAG2Q8N3U4 1231 aa25.82■■□□□ 1.72
ATG4D-209ENST00000588857 PRPF3O43395 683 aaKnown RBP25.81■■□□□ 1.72
ATG4D-209ENST00000588857 CDC37L1Q7L3B6 337 aa25.81■■□□□ 1.72
ATG4D-209ENST00000588857 GBP4Q96PP9 640 aa25.81■■□□□ 1.72
ATG4D-209ENST00000588857 GINM1Q9NU53 330 aa25.81■■□□□ 1.72
ATG4D-209ENST00000588857 KLRF2D3W0D1 207 aa25.8■■□□□ 1.72
ATG4D-209ENST00000588857 TRAF5O00463 557 aa25.8■■□□□ 1.72
ATG4D-209ENST00000588857 CTNND1O60716 968 aaKnown RBP25.8■■□□□ 1.72
ATG4D-209ENST00000588857 F13A1P00488 732 aa25.8■■□□□ 1.72
ATG4D-209ENST00000588857 GOLGA8HP0CJ92 632 aa25.8■■□□□ 1.72
ATG4D-209ENST00000588857 FMR1Q06787 632 aaKnown RBP eCLIP25.8■■□□□ 1.72
ATG4D-209ENST00000588857 ASPRV1Q53RT3 343 aa25.8■■□□□ 1.72
ATG4D-209ENST00000588857 KRT26Q7Z3Y9 468 aa25.8■■□□□ 1.72
ATG4D-209ENST00000588857 SYNPO2Q9UMS6 1093 aa25.8■■□□□ 1.72
ATG4D-209ENST00000588857 V9GY48 417 aaPredicted RBP25.8■■□□□ 1.72
ATG4D-209ENST00000588857 CNTNAP5Q8WYK1 1306 aa25.79■■□□□ 1.72
ATG4D-209ENST00000588857 RAD21O60216 631 aa25.79■■□□□ 1.72
ATG4D-209ENST00000588857 TRIM29Q14134 588 aa25.79■■□□□ 1.72
ATG4D-209ENST00000588857 RGS22Q8NE09 1264 aa25.79■■□□□ 1.72
ATG4D-209ENST00000588857 GLIS2Q9BZE0 524 aaPredicted RBP25.79■■□□□ 1.72
ATG4D-209ENST00000588857 RBM27Q9P2N5 1060 aaKnown RBP25.79■■□□□ 1.72
ATG4D-209ENST00000588857 ATP6V1DQ9Y5K8 247 aa25.79■■□□□ 1.72
ATG4D-209ENST00000588857 DOCK1Q14185 1865 aa25.79■■□□□ 1.72
ATG4D-209ENST00000588857 SNHG28P0DPA3 235 aa25.78■■□□□ 1.72
ATG4D-209ENST00000588857 RASGRP2Q7LDG7 609 aa25.78■■□□□ 1.72
ATG4D-209ENST00000588857 ADM5C9JUS6 153 aa25.78■■□□□ 1.72
ATG4D-209ENST00000588857 GUCY1B3Q02153 619 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms