RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 HMOX1P09601 288 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 NFKBIAP25963 317 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 SERPINB4P48594 390 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 PMS2P54278 862 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 ITGA7Q13683 1181 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 TWISTNBQ3B726 338 aaPredicted RBP8.62□□□□□ -1.03
LAMA3-210ENST00000588770 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.62□□□□□ -1.03
LAMA3-210ENST00000588770 PPP4R4Q6NUP7 873 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 CTTNBP2NLQ9P2B4 639 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 HPCAL4Q9UM19 191 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 AKR1B10O60218 316 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 TRPC1P48995 793 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 COG7P83436 770 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 CUL4AQ13619 759 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 CCDC129Q6ZRS4 1044 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 C16orf71Q8IYS4 520 aaPredicted RBP8.62□□□□□ -1.03
LAMA3-210ENST00000588770 ANKRD13AQ8IZ07 590 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 SMYD1Q8NB12 490 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.62□□□□□ -1.03
LAMA3-210ENST00000588770 KCND1Q9NSA2 647 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 ABCF3Q9NUQ8 709 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 SSX2IPQ9Y2D8 614 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 GMEB1Q9Y692 573 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 TESPA1A2RU30 521 aaPredicted RBP8.62□□□□□ -1.03
LAMA3-210ENST00000588770 GSTA2P09210 222 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 GFAPP14136 432 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 C6orf163Q5TEZ5 329 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.62□□□□□ -1.03
LAMA3-210ENST00000588770 VPS37AQ8NEZ2 397 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 C8orf76Q96K31 380 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 NUP58Q9BVL2 599 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 EHD4Q9H223 541 aa8.62□□□□□ -1.03
LAMA3-210ENST00000588770 MGEA5O60502 916 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 S100A1P23297 94 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 NECAB1Q8N987 351 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 NEK9Q8TD19 979 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 HDAC7Q8WUI4 952 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 KIFAP3Q92845 792 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 ACSBG1Q96GR2 724 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 MOV10L1Q9BXT6 1211 aaKnown RBP8.61□□□□□ -1.03
LAMA3-210ENST00000588770 WDR35Q9P2L0 1181 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 A0A1B0GVG6 124 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 TIMM44O43615 452 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 GFPT2O94808 682 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 SKIP12755 728 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 RPL13P26373 211 aaKnown RBP8.61□□□□□ -1.03
LAMA3-210ENST00000588770 TBL3Q12788 808 aaKnown RBP8.61□□□□□ -1.03
LAMA3-210ENST00000588770 RUFY3Q7L099 469 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 TAOK1Q7L7X3 1001 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 ANKRD27Q96NW4 1050 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 CATSPER2Q96P56 530 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 PNKPQ96T60 521 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 TUBGCP4Q9UGJ1 667 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 DPPA5A6NC42 116 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 PDLIM1O00151 329 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 FOSL1P15407 271 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 CHMLP26374 656 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 SCTRP47872 440 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 TMEM62Q0P6H9 643 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 NNTQ13423 1086 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 FXNQ16595 210 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 HDGFL2Q7Z4V5 671 aaPredicted RBP8.61□□□□□ -1.03
LAMA3-210ENST00000588770 AASDHPPTQ9NRN7 309 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 CCDC87Q9NVE4 849 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 LSP1P33241 339 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 FAM173BQ6P4H8 233 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 PIAS4Q8N2W9 510 aaPredicted RBP8.61□□□□□ -1.03
LAMA3-210ENST00000588770 CCDC197Q8NCU1 140 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 TRAPPC9Q96Q05 1148 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 WDR24Q96S15 920 aa8.61□□□□□ -1.03
LAMA3-210ENST00000588770 UBE2OQ9C0C9 1292 aaKnown RBP8.61□□□□□ -1.03
LAMA3-210ENST00000588770 TRIM64CA6NLI5 447 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 PPP1R37O75864 691 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 NPTXRO95502 500 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 MSANTD4Q8NCY6 345 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 RAB21Q9UL25 225 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 FYCO1Q9BQS8 1478 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 SLC3A2P08195 630 aaKnown RBP8.6□□□□□ -1.03
LAMA3-210ENST00000588770 LINGO3P0C6S8 592 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 PCYT1AP49585 367 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 TRMT2AQ8IZ69 625 aaKnown RBP8.6□□□□□ -1.03
LAMA3-210ENST00000588770 FNBP4Q8N3X1 1017 aaPredicted RBP8.6□□□□□ -1.03
LAMA3-210ENST00000588770 CAPZA3Q96KX2 299 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 CNGB3Q9NQW8 809 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 PHF24Q9UPV7 400 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 EIF3FO00303 357 aaPredicted RBP8.6□□□□□ -1.03
LAMA3-210ENST00000588770 HNRNPRO43390 633 aaKnown RBP8.6□□□□□ -1.03
LAMA3-210ENST00000588770 GNAI3P08754 354 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 HSPA8P11142 646 aaKnown RBP8.6□□□□□ -1.03
LAMA3-210ENST00000588770 BCRP11274 1271 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 NR1D1P20393 614 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 ERCC5P28715 1186 aaPredicted RBP8.6□□□□□ -1.03
LAMA3-210ENST00000588770 AARSP49588 968 aaKnown RBP eCLIP8.6□□□□□ -1.03
LAMA3-210ENST00000588770 DNA2P51530 1060 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 USP46P62068 366 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 IGBP1P78318 339 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 SELENOOQ9BVL4 669 aa8.6□□□□□ -1.03
LAMA3-210ENST00000588770 ABLIM1O14639 778 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 PRC1O43663 620 aa8.59□□□□□ -1.03
LAMA3-210ENST00000588770 SHOX2O60902 331 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms