RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 CCDC160A6NGH7 325 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 IFIT3O14879 490 aaKnown RBP11.66□□□□□ -0.54
LSM14A-206ENST00000588582 TTF1Q15361 905 aaPredicted RBP11.66□□□□□ -0.54
LSM14A-206ENST00000588582 SOGA3Q5TF21 947 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 NFRKBQ6P4R8 1299 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 MPRIPQ6WCQ1 1025 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 UBE3BQ7Z3V4 1068 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 KIF2BQ8N4N8 673 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 FAXDC2Q96IV6 333 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 RPGRIP1Q96KN7 1286 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 ELAC2Q9BQ52 826 aaKnown RBP11.66□□□□□ -0.54
LSM14A-206ENST00000588582 TEX13AQ9BXU3 409 aaPredicted RBP11.66□□□□□ -0.54
LSM14A-206ENST00000588582 OSBPL1AQ9BXW6 950 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 SHANK2Q9UPX8 1470 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 PLAAQ9Y263 795 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 GMNCA6NCL1 334 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 HIP1RO75146 1068 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 CTDNEP1O95476 244 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 GNAT1P11488 350 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 PLCD1P51178 756 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 KIF23Q02241 960 aaPredicted RBP11.66□□□□□ -0.54
LSM14A-206ENST00000588582 TMEM67Q5HYA8 995 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 SPATA1Q5VX52 437 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 FAM47EQ6ZV65 393 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 LONP2Q86WA8 852 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 FUKQ8N0W3 1084 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 NCOA7Q8NI08 942 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 ENOX1Q8TC92 643 aaKnown RBP11.66□□□□□ -0.54
LSM14A-206ENST00000588582 ANKRD24Q8TF21 1146 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 KLHL29Q96CT2 875 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 ZKSCAN3Q9BRR0 538 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 LRWD1Q9UFC0 647 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 SLC12A7Q9Y666 1083 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 DUSP10Q9Y6W6 482 aa11.66□□□□□ -0.54
LSM14A-206ENST00000588582 UGGT1Q9NYU2 1555 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 ZBTB43O43298 467 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 IDI1Q13907 227 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 KANK3Q6NY19 840 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 GIGYF2Q6Y7W6 1299 aaKnown RBP11.65□□□□□ -0.54
LSM14A-206ENST00000588582 DIS3L2Q8IYB7 885 aaKnown RBP11.65□□□□□ -0.54
LSM14A-206ENST00000588582 CCDC197Q8NCU1 140 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 TRIM58Q8NG06 486 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 NBPF3Q9H094 633 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 FAM207AQ9NSI2 230 aaPredicted RBP11.65□□□□□ -0.54
LSM14A-206ENST00000588582 ABHD10Q9NUJ1 306 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 SYNJ2O15056 1496 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 ATP10BO94823 1461 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 CFAP65Q6ZU64 1925 aaKnown RBP11.65□□□□□ -0.54
LSM14A-206ENST00000588582 EPS15P42566 896 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 TRAF1Q13077 416 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 USP4Q13107 963 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 LAMB3Q13751 1172 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 DBN1Q16643 649 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 PTGISQ16647 500 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 C1orf141Q5JVX7 400 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 RASIP1Q5U651 963 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 STOX1Q6ZVD7 989 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 C2CD5Q86YS7 1000 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 KCNK9Q9NPC2 374 aa11.65□□□□□ -0.54
LSM14A-206ENST00000588582 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.65□□□□□ -0.54
LSM14A-206ENST00000588582 KCNJ18B7U540 433 aa11.65□□□□□ -0.55
LSM14A-206ENST00000588582 SETSIPP0DME0 302 aa11.65□□□□□ -0.55
LSM14A-206ENST00000588582 MDH1P40925 334 aaKnown RBP11.65□□□□□ -0.55
LSM14A-206ENST00000588582 SPAG1Q07617 926 aa11.65□□□□□ -0.55
LSM14A-206ENST00000588582 KCNJ12Q14500 433 aa11.65□□□□□ -0.55
LSM14A-206ENST00000588582 CCDC38Q502W7 563 aa11.65□□□□□ -0.55
LSM14A-206ENST00000588582 KRT26Q7Z3Y9 468 aa11.65□□□□□ -0.55
LSM14A-206ENST00000588582 SUCLG2Q96I99 432 aa11.65□□□□□ -0.55
LSM14A-206ENST00000588582 DPH5Q9H2P9 285 aa11.65□□□□□ -0.55
LSM14A-206ENST00000588582 MLXIPQ9HAP2 919 aa11.65□□□□□ -0.55
LSM14A-206ENST00000588582 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.55
LSM14A-206ENST00000588582 GRM8O00222 908 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 PFDN1O60925 122 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 PRPF6O94906 941 aaKnown RBP11.64□□□□□ -0.55
LSM14A-206ENST00000588582 FSBPO95073 299 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 MAGEA1P43355 309 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 ZNF174Q15697 407 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 WDR93Q6P2C0 686 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 CCDC25Q86WR0 208 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 CDK5RAP3Q96JB5 506 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 TRPC6Q9Y210 931 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 ABCC10Q5T3U5 1492 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 ZSCAN5CA6NGD5 496 aaPredicted RBP11.64□□□□□ -0.55
LSM14A-206ENST00000588582 CETN3O15182 167 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 CTCFP49711 727 aaPredicted RBP11.64□□□□□ -0.55
LSM14A-206ENST00000588582 ADCY1Q08828 1119 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 TSEN2Q8NCE0 465 aaKnown RBP11.64□□□□□ -0.55
LSM14A-206ENST00000588582 ZNF483Q8TF39 744 aaPredicted RBP11.64□□□□□ -0.55
LSM14A-206ENST00000588582 NELFBQ8WX92 580 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 CUL5Q93034 780 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 SUDS3Q9H7L9 328 aaPredicted RBP11.64□□□□□ -0.55
LSM14A-206ENST00000588582 CEP131Q9UPN4 1083 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 XBP1P17861 261 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 CARSP49589 748 aaKnown RBP11.64□□□□□ -0.55
LSM14A-206ENST00000588582 COPB1P53618 953 aaKnown RBP11.64□□□□□ -0.55
LSM14A-206ENST00000588582 RASGRP2Q7LDG7 609 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 ADAT2Q7Z6V5 191 aaKnown RBP11.64□□□□□ -0.55
LSM14A-206ENST00000588582 TMEM139Q8IV31 216 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 MS4A14Q96JA4 679 aa11.64□□□□□ -0.55
LSM14A-206ENST00000588582 KIAA0232Q92628 1395 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms