RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 LOC285556D6RIA3 1793 aa12□□□□□ -0.49
TPM4-207ENST00000588032 PCNTO95613 3336 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 ORC4O43929 436 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 PRDM1O75626 825 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 FMNL1O95466 1100 aaPredicted RBP11.99□□□□□ -0.49
TPM4-207ENST00000588032 TSPY3P0CV98 308 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 TSPY8P0CW00 308 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 CHMLP26374 656 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 HERVK_113P62684 666 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 TFAP4Q01664 338 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 COG2Q14746 738 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 MKL1Q969V6 931 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.99□□□□□ -0.49
TPM4-207ENST00000588032 RNF41Q9H4P4 317 aaPredicted RBP11.99□□□□□ -0.49
TPM4-207ENST00000588032 RPAP3Q9H6T3 665 aaPredicted RBP11.99□□□□□ -0.49
TPM4-207ENST00000588032 HOXC10Q9NYD6 342 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 MORF4L1Q9UBU8 362 aa11.99□□□□□ -0.49
TPM4-207ENST00000588032 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.99□□□□□ -0.49
TPM4-207ENST00000588032 PLIN4Q96Q06 1357 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 IGKV6D-41A0A0C4DH26 115 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 TSPY2A6NKD2 308 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 ZNF213O14771 459 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 WDR46O15213 610 aaKnown RBP11.98□□□□□ -0.49
TPM4-207ENST00000588032 TTLL1O95922 423 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 ATP2B2Q01814 1243 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 CTDSPL2Q05D32 466 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 LBX2Q6XYB7 198 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 MFSD6Q6ZSS7 791 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 GPRC5AQ8NFJ5 357 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 MTMR4Q9NYA4 1195 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 SRRDQ9UH36 339 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
TPM4-207ENST00000588032 MYPNQ86TC9 1320 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 IMMTQ16891 758 aaKnown RBP11.97□□□□□ -0.49
TPM4-207ENST00000588032 BMP2KLQ5H9B9 411 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 AKNAD1Q5T1N1 836 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 STAG1Q8WVM7 1258 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 COA7Q96BR5 231 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 CEP95Q96GE4 821 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 TRIM47Q96LD4 638 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 TANGO6Q9C0B7 1094 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 ARHGAP39Q9C0H5 1083 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 RBPJLQ9UBG7 517 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 CLIP2Q9UDT6 1046 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 RABGAP1Q9Y3P9 1069 aa11.97□□□□□ -0.49
TPM4-207ENST00000588032 CCDC85CA6NKD9 419 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 F5H6K3 240 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 TNPO2O14787 897 aaKnown RBP11.96□□□□□ -0.49
TPM4-207ENST00000588032 RANBP6O60518 1105 aaKnown RBP11.96□□□□□ -0.49
TPM4-207ENST00000588032 CCNA1P78396 465 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 CAP1Q01518 475 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 KLRC3Q07444 240 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 FAM47AQ5JRC9 791 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 NBPF11Q86T75 865 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 CLEC10AQ8IUN9 316 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 MB21D1Q8N884 522 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 TOMM22Q9NS69 142 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 TCP11L1Q9NUJ3 509 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 PPP4R2Q9NY27 417 aa11.96□□□□□ -0.49
TPM4-207ENST00000588032 MYH8P13535 1937 aa11.96□□□□□ -0.5
TPM4-207ENST00000588032 SGSM2O43147 1006 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 FLOT1O75955 427 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 CTGFP29279 349 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 MAPK4P31152 587 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 ERVK-9P63128 1117 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 ERVK-24P63145 666 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 KIAA1755Q5JYT7 1200 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 CCAR1Q8IX12 1150 aaKnown RBP11.95□□□□□ -0.5
TPM4-207ENST00000588032 SPICE1Q8N0Z3 855 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 GMCL1P1Q8NEA9 526 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 ESR2Q92731 530 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 TXNRD2Q9NNW7 524 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 INCENPQ9NQS7 918 aa11.95□□□□□ -0.5
TPM4-207ENST00000588032 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
TPM4-207ENST00000588032 RAD21O60216 631 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 NOVP48745 357 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 HAND2P61296 217 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 IRF5Q13568 498 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 CCDC178Q5BJE1 867 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 RRP12Q5JTH9 1297 aaKnown RBP11.94□□□□□ -0.5
TPM4-207ENST00000588032 CASC1Q6TDU7 716 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 KIAA1211Q6ZU35 1233 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 RAET1EQ8TD07 263 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 ARMC5Q96C12 935 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 TTC14Q96N46 770 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 PAGR1Q9BTK6 254 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 CNNM2Q9H8M5 875 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 IL17RBQ9NRM6 502 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 FOXD4L1Q9NU39 408 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 PTCH2Q9Y6C5 1203 aa11.94□□□□□ -0.5
TPM4-207ENST00000588032 NDUFB10O96000 172 aa11.93□□□□□ -0.5
TPM4-207ENST00000588032 FLT3LGP49771 235 aa11.93□□□□□ -0.5
TPM4-207ENST00000588032 Q3C1V9 767 aa11.93□□□□□ -0.5
TPM4-207ENST00000588032 SLC9C1Q4G0N8 1177 aa11.93□□□□□ -0.5
TPM4-207ENST00000588032 PXYLP1Q8TE99 480 aa11.93□□□□□ -0.5
TPM4-207ENST00000588032 KRT23Q9C075 422 aa11.93□□□□□ -0.5
TPM4-207ENST00000588032 IL25Q9H293 177 aa11.93□□□□□ -0.5
TPM4-207ENST00000588032 ADAMTS5Q9UNA0 930 aa11.93□□□□□ -0.5
TPM4-207ENST00000588032 STX8Q9UNK0 236 aa11.93□□□□□ -0.5
TPM4-207ENST00000588032 TACC3Q9Y6A5 838 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms