RNA–Protein interactions for RNA: ENST00000587582.1

CDH20-204, Transcript of cadherin 20, humanhuman

TSL 4

Gene CDH20, Length 533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-204ENST00000587582 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
CDH20-204ENST00000587582 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.41■□□□□ 0.22
CDH20-204ENST00000587582 VCPKMTQ9H867 229 aa16.41■□□□□ 0.22
CDH20-204ENST00000587582 RBPJLQ9UBG7 517 aa16.41■□□□□ 0.22
CDH20-204ENST00000587582 BIN2Q9UBW5 565 aaPredicted RBP16.41■□□□□ 0.22
CDH20-204ENST00000587582 TMX2Q9Y320 296 aa16.41■□□□□ 0.22
CDH20-204ENST00000587582 HTTP42858 3142 aa16.41■□□□□ 0.22
CDH20-204ENST00000587582 MGAMO43451 1857 aa16.4■□□□□ 0.22
CDH20-204ENST00000587582 TSPY3P0CV98 308 aa16.4■□□□□ 0.22
CDH20-204ENST00000587582 TSPY8P0CW00 308 aa16.4■□□□□ 0.22
CDH20-204ENST00000587582 HSPD1P10809 573 aaKnown RBP16.4■□□□□ 0.22
CDH20-204ENST00000587582 GSPT1P15170 499 aaKnown RBP16.4■□□□□ 0.22
CDH20-204ENST00000587582 ERVK-9P63128 1117 aa16.4■□□□□ 0.22
CDH20-204ENST00000587582 ERVK-24P63145 666 aa16.4■□□□□ 0.22
CDH20-204ENST00000587582 GTF3C2Q8WUA4 911 aaPredicted RBP16.4■□□□□ 0.22
CDH20-204ENST00000587582 LPAR1Q92633 364 aa16.4■□□□□ 0.22
CDH20-204ENST00000587582 ZNF333Q96JL9 665 aa16.4■□□□□ 0.22
CDH20-204ENST00000587582 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
CDH20-204ENST00000587582 GOPCQ9HD26 462 aa16.4■□□□□ 0.22
CDH20-204ENST00000587582 TOMM22Q9NS69 142 aa16.4■□□□□ 0.22
CDH20-204ENST00000587582 MORF4L1Q9UBU8 362 aa16.4■□□□□ 0.22
CDH20-204ENST00000587582 SPDYE16A6NNV3 312 aaPredicted RBP16.39■□□□□ 0.21
CDH20-204ENST00000587582 HIP1O00291 1037 aa16.39■□□□□ 0.21
CDH20-204ENST00000587582 FLOT1O75955 427 aa16.39■□□□□ 0.21
CDH20-204ENST00000587582 FGAP02671 866 aa16.39■□□□□ 0.21
CDH20-204ENST00000587582 GRK4P32298 578 aa16.39■□□□□ 0.21
CDH20-204ENST00000587582 MFAP1P55081 439 aaKnown RBP16.39■□□□□ 0.21
CDH20-204ENST00000587582 HAND2P61296 217 aa16.39■□□□□ 0.21
CDH20-204ENST00000587582 Q3C1V9 767 aa16.39■□□□□ 0.21
CDH20-204ENST00000587582 WDR78Q5VTH9 848 aa16.39■□□□□ 0.21
CDH20-204ENST00000587582 TICAM2Q86XR7 235 aa16.39■□□□□ 0.21
CDH20-204ENST00000587582 INCENPQ9NQS7 918 aa16.39■□□□□ 0.21
CDH20-204ENST00000587582 CLIP2Q9UDT6 1046 aa16.39■□□□□ 0.21
CDH20-204ENST00000587582 ELNP15502 786 aa16.38■□□□□ 0.21
CDH20-204ENST00000587582 TFAP4Q01664 338 aa16.38■□□□□ 0.21
CDH20-204ENST00000587582 MLLT1Q03111 559 aaPredicted RBP16.38■□□□□ 0.21
CDH20-204ENST00000587582 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
CDH20-204ENST00000587582 POTEEQ6S8J3 1075 aa16.38■□□□□ 0.21
CDH20-204ENST00000587582 CEP95Q96GE4 821 aa16.38■□□□□ 0.21
CDH20-204ENST00000587582 TMEM106CQ9BVX2 250 aa16.38■□□□□ 0.21
CDH20-204ENST00000587582 PORCNQ9H237 461 aa16.38■□□□□ 0.21
CDH20-204ENST00000587582 RABGAP1Q9Y3P9 1069 aa16.38■□□□□ 0.21
CDH20-204ENST00000587582 POTEFA5A3E0 1075 aa16.37■□□□□ 0.21
CDH20-204ENST00000587582 TSPY2A6NKD2 308 aa16.37■□□□□ 0.21
CDH20-204ENST00000587582 WDR46O15213 610 aaKnown RBP16.37■□□□□ 0.21
CDH20-204ENST00000587582 ADCY3O60266 1144 aa16.37■□□□□ 0.21
CDH20-204ENST00000587582 RANBP6O60518 1105 aaKnown RBP16.37■□□□□ 0.21
CDH20-204ENST00000587582 CNMDO75829 334 aa16.37■□□□□ 0.21
CDH20-204ENST00000587582 COG2Q14746 738 aa16.37■□□□□ 0.21
CDH20-204ENST00000587582 ALX1Q15699 326 aa16.37■□□□□ 0.21
CDH20-204ENST00000587582 FAM83BQ5T0W9 1011 aa16.37■□□□□ 0.21
CDH20-204ENST00000587582 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
CDH20-204ENST00000587582 NUP88Q99567 741 aaPredicted RBP16.37■□□□□ 0.21
CDH20-204ENST00000587582 BTBD7Q9P203 1132 aa16.37■□□□□ 0.21
CDH20-204ENST00000587582 NYAP2Q9P242 653 aa16.37■□□□□ 0.21
CDH20-204ENST00000587582 ISY1Q9ULR0 285 aaKnown RBP16.37■□□□□ 0.21
CDH20-204ENST00000587582 GREB1LQ9C091 1923 aaPredicted RBP16.37■□□□□ 0.21
CDH20-204ENST00000587582 IGKV6D-41A0A0C4DH26 115 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 MAPK4P31152 587 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 CCNA1P78396 465 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 PLS1Q14651 629 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 MTFR1Q15390 333 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 SLAIN1Q8ND83 568 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 NEDD1Q8NHV4 660 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 CHMP4CQ96CF2 233 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 ATG4CQ96DT6 458 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 FBXO28Q9NVF7 368 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 MTMR4Q9NYA4 1195 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 HOXC10Q9NYD6 342 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDH20-204ENST00000587582 TACC3Q9Y6A5 838 aa16.36■□□□□ 0.21
CDH20-204ENST00000587582 NMT2O60551 498 aa16.35■□□□□ 0.21
CDH20-204ENST00000587582 TTLL1O95922 423 aa16.35■□□□□ 0.21
CDH20-204ENST00000587582 NDUFB10O96000 172 aa16.35■□□□□ 0.21
CDH20-204ENST00000587582 CYP2B6P20813 491 aa16.35■□□□□ 0.21
CDH20-204ENST00000587582 RGS19P49795 217 aa16.35■□□□□ 0.21
CDH20-204ENST00000587582 GPR142Q7Z601 462 aa16.35■□□□□ 0.21
CDH20-204ENST00000587582 ANAPC4Q9UJX5 808 aa16.35■□□□□ 0.21
CDH20-204ENST00000587582 STX8Q9UNK0 236 aa16.35■□□□□ 0.21
CDH20-204ENST00000587582 PLIN4Q96Q06 1357 aa16.35■□□□□ 0.21
CDH20-204ENST00000587582 CENPFP49454 3210 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 F5H6K3 240 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 INHAP05111 366 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 DSG3P32926 999 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 UBXN2AP68543 259 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 KLRC3Q07444 240 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 IRF5Q13568 498 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 LBX2Q6XYB7 198 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 CENPQQ7L2Z9 268 aaPredicted RBP16.34■□□□□ 0.21
CDH20-204ENST00000587582 PLEKHH3Q7Z736 793 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 SKAP1Q86WV1 359 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 NUDT12Q9BQG2 462 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 IL25Q9H293 177 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 MTMR7Q9Y216 660 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 ZMYM6O95789 1325 aa16.34■□□□□ 0.21
CDH20-204ENST00000587582 DOCK3Q8IZD9 2030 aa16.33■□□□□ 0.21
CDH20-204ENST00000587582 NEFLP07196 543 aa16.33■□□□□ 0.2
CDH20-204ENST00000587582 EN2P19622 333 aaPredicted RBP16.33■□□□□ 0.2
CDH20-204ENST00000587582 TBC1D10CQ8IV04 446 aa16.33■□□□□ 0.2
CDH20-204ENST00000587582 SOCS4Q8WXH5 440 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms