RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 PLS1Q14651 629 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 SLC35F6Q8N357 371 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 CRACR2BQ8N4Y2 399 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 CSGALNACT2Q8N6G5 542 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 RPGRQ92834 1020 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 PSMA7O14818 248 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 MMP1P03956 469 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 PRPF4BQ13523 1007 aaKnown RBP15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 HLTFQ14527 1009 aaKnown RBP eCLIP15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 UBE3CQ15386 1083 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 KCTD19Q17RG1 926 aaPredicted RBP15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 ZFYVE27Q5T4F4 411 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 HPS3Q969F9 1004 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 LOC102724428A0A0B4J2F2 783 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 GSG1L2A8MUP6 293 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 CXCR5P32302 372 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 TECP42680 631 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 SIK1P57059 783 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 ADGRL3Q9HAR2 1447 aa15.48■□□□□ 0.07
CACNA1A-209ENST00000587525 KIF20BQ96Q89 1820 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 SRGAP2O75044 1071 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 CIAO1O76071 339 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 IRX3P78415 501 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 TSGA10IPQ3SY00 556 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 IFT81Q8WYA0 676 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 KANSL2Q9H9L4 492 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 EPB41L4AQ9HCS5 686 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 RIPOR2Q9Y4F9 1068 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 LDHBP07195 334 aaKnown RBP15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 ZNF76P36508 570 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 SETQ01105 290 aaPredicted RBP15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 NCAPH2Q6IBW4 605 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 CTR9Q6PD62 1173 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 SLC39A2Q9NP94 309 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 TMCO5BA8MYB1 307 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 EVX2Q03828 476 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 TCP10Q12799 353 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 PAK1Q13153 545 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 CCDC42Q96M95 316 aa15.47■□□□□ 0.07
CACNA1A-209ENST00000587525 ARID4AP29374 1257 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-209ENST00000587525 LRRC41Q15345 812 aa15.46■□□□□ 0.07
CACNA1A-209ENST00000587525 ARHGAP23Q9P227 1491 aa15.46■□□□□ 0.07
CACNA1A-209ENST00000587525 CTIFO43310 598 aaKnown RBP15.46■□□□□ 0.07
CACNA1A-209ENST00000587525 CELF1Q92879 486 aaKnown RBP15.46■□□□□ 0.07
CACNA1A-209ENST00000587525 TMEM51Q9NW97 253 aa15.46■□□□□ 0.07
CACNA1A-209ENST00000587525 PKD2L1Q9P0L9 805 aa15.46■□□□□ 0.07
CACNA1A-209ENST00000587525 MORC2Q9Y6X9 1032 aaPredicted RBP15.46■□□□□ 0.07
CACNA1A-209ENST00000587525 GNAT2P19087 354 aa15.46■□□□□ 0.06
CACNA1A-209ENST00000587525 USP8P40818 1118 aa15.46■□□□□ 0.06
CACNA1A-209ENST00000587525 ODF2Q5BJF6 829 aa15.46■□□□□ 0.06
CACNA1A-209ENST00000587525 RNF187Q5TA31 235 aaPredicted RBP15.46■□□□□ 0.06
CACNA1A-209ENST00000587525 GPR108Q9NPR9 543 aa15.46■□□□□ 0.06
CACNA1A-209ENST00000587525 DIP2AQ14689 1571 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 RPS8P62241 208 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 CUL4BQ13620 913 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 TYW1BQ6NUM6 668 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 FOXP4Q8IVH2 680 aaPredicted RBP15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 CCDC43Q96MW1 224 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 ISCA1Q9BUE6 129 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 SUGCTQ9HAC7 445 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 SLIT1O75093 1534 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 VSTM4Q8IW00 320 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 PNMA1Q8ND90 353 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 CALML4Q96GE6 196 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 NOC4LQ9BVI4 516 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 PARD6BQ9BYG5 372 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 ZEB2O60315 1214 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 FMNL1O95466 1100 aaPredicted RBP15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 IFNAR1P17181 557 aa15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 AEBP2Q6ZN18 517 aaPredicted RBP15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 GSPT2Q8IYD1 628 aaKnown RBP15.45■□□□□ 0.06
CACNA1A-209ENST00000587525 DLG5Q8TDM6 1919 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 A0A0U1RQJ8 604 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 ATRIPQ8WXE1 791 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 CARD10Q9BWT7 1032 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 BMP2KQ9NSY1 1161 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 SPATA31A3Q5VYP0 1347 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 MROH5Q6ZUA9 1318 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 B4DLN1 442 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 KCNJ18B7U540 433 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 KCNJ12Q14500 433 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 LLGL1Q15334 1064 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 USP17L2Q6R6M4 530 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 TEX11Q8IYF3 940 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 TRIM10Q9UDY6 481 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 TCEAL9Q9UHQ7 104 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 KDM4FA0A1W2PPD8 638 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 BAG3O95817 575 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 KLRK1P26718 216 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 MORC3Q14149 939 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 NBPF11Q86T75 865 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 ENAHQ8N8S7 591 aaPredicted RBP15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 IGDCC4Q8TDY8 1250 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 CEP89Q96ST8 783 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 HDAC6Q9UBN7 1215 aa15.44■□□□□ 0.06
CACNA1A-209ENST00000587525 CLEC10AQ8IUN9 316 aa15.43■□□□□ 0.06
CACNA1A-209ENST00000587525 KCNB2Q92953 911 aa15.43■□□□□ 0.06
CACNA1A-209ENST00000587525 SRCAPQ6ZRS2 3230 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms