RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 PIP4K2BP78356 416 aa8.42□□□□□ -1.06
TPM4-203ENST00000586193 PIN1Q13526 163 aaPredicted RBP8.42□□□□□ -1.06
TPM4-203ENST00000586193 DHCR24Q15392 516 aa8.42□□□□□ -1.06
TPM4-203ENST00000586193 ZC3H12AQ5D1E8 599 aaKnown RBP8.42□□□□□ -1.06
TPM4-203ENST00000586193 APBB1IPQ7Z5R6 666 aaPredicted RBP8.42□□□□□ -1.06
TPM4-203ENST00000586193 ZBTB46Q86UZ6 589 aa8.42□□□□□ -1.06
TPM4-203ENST00000586193 PASD1Q8IV76 773 aa8.42□□□□□ -1.06
TPM4-203ENST00000586193 MCATQ8IVS2 390 aaKnown RBP8.42□□□□□ -1.06
TPM4-203ENST00000586193 TTC9Q92623 222 aa8.42□□□□□ -1.06
TPM4-203ENST00000586193 EVI5LQ96CN4 794 aa8.42□□□□□ -1.06
TPM4-203ENST00000586193 SLC39A13Q96H72 371 aa8.42□□□□□ -1.06
TPM4-203ENST00000586193 RTFDC1Q9BY42 306 aaPredicted RBP8.42□□□□□ -1.06
TPM4-203ENST00000586193 CDH19Q9H159 772 aa8.42□□□□□ -1.06
TPM4-203ENST00000586193 RGS13O14921 159 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 CBFA2T2O43439 604 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
TPM4-203ENST00000586193 RGS9O75916 674 aaPredicted RBP8.41□□□□□ -1.06
TPM4-203ENST00000586193 UBOX5O94941 541 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 NPTXRO95502 500 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 HNRNPUQ00839 825 aaKnown RBP eCLIP8.41□□□□□ -1.06
TPM4-203ENST00000586193 PPM1JQ5JR12 505 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 FAM117BQ6P1L5 589 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 SLC4A10Q6U841 1118 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 ADAT2Q7Z6V5 191 aaKnown RBP8.41□□□□□ -1.06
TPM4-203ENST00000586193 SLFN12Q8IYM2 578 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 CACTIN-AS1Q8N1I8 211 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 ZNF513Q8N8E2 541 aaPredicted RBP8.41□□□□□ -1.06
TPM4-203ENST00000586193 NUDT8Q8WV74 236 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 TMEM87BQ96K49 555 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 KLHL25Q9H0H3 589 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 PICK1Q9NRD5 415 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 KLF15Q9UIH9 416 aa8.41□□□□□ -1.06
TPM4-203ENST00000586193 AXIN1O15169 862 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 BRINP1O60477 761 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 LDHAP00338 332 aaKnown RBP8.4□□□□□ -1.06
TPM4-203ENST00000586193 CAPNS1P04632 268 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 GBP1P32455 592 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 TMPRSS15P98073 1019 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 RING1Q06587 406 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 MLC1Q15049 377 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 DCAF15Q66K64 600 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 FOXR1Q6PIV2 292 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 KSR2Q6VAB6 950 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 SPATS2Q86XZ4 545 aaKnown RBP8.4□□□□□ -1.06
TPM4-203ENST00000586193 CCDC144CPQ8IYA2 1237 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 COG1Q8WTW3 980 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 CHMP4CQ96CF2 233 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 CARD10Q9BWT7 1032 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 OSGEPQ9NPF4 335 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 PLA2G2EQ9NZK7 142 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 TRHDEQ9UKU6 1024 aa8.4□□□□□ -1.06
TPM4-203ENST00000586193 BLACEA4D250 179 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 ADARB2-AS1A8MUL3 147 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 FSCN2O14926 492 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 PRPF3O43395 683 aaKnown RBP8.39□□□□□ -1.07
TPM4-203ENST00000586193 CLEC3AO75596 197 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 ASLP04424 464 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 JMJD7P0C870 316 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 HLTFQ14527 1009 aaKnown RBP eCLIP8.39□□□□□ -1.07
TPM4-203ENST00000586193 BRD3Q15059 726 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 CNTD1Q8N815 330 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 BVESQ8NE79 360 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 GSTCDQ8NEC7 633 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 BAHD1Q8TBE0 780 aaPredicted RBP8.39□□□□□ -1.07
TPM4-203ENST00000586193 USP7Q93009 1102 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 WNT8BQ93098 351 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 SCLYQ96I15 445 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 ZNF512BQ96KM6 892 aaPredicted RBP8.39□□□□□ -1.07
TPM4-203ENST00000586193 CCDC74BQ96LY2 380 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 TTC1Q99614 292 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 USP26Q9BXU7 913 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 PUS7LQ9H0K6 701 aaKnown RBP8.39□□□□□ -1.07
TPM4-203ENST00000586193 ZNF180Q9UJW8 692 aa8.39□□□□□ -1.07
TPM4-203ENST00000586193 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.38□□□□□ -1.07
TPM4-203ENST00000586193 E2F8A0AVK6 867 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 SPDYE3A6NKU9 549 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 NOP56O00567 594 aaKnown RBP8.38□□□□□ -1.07
TPM4-203ENST00000586193 GABRDO14764 452 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 SLFN14P0C7P3 912 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 BAG6P46379 1132 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 ID4P47928 161 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 GABREP78334 506 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 SAFB2Q14151 953 aaKnown RBP eCLIP8.38□□□□□ -1.07
TPM4-203ENST00000586193 GRIK5Q16478 980 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 FAM102BQ5T8I3 360 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 SLC6A19Q695T7 634 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 TCEAL8Q8IYN2 117 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 SAMD3Q8N6K7 520 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
TPM4-203ENST00000586193 KLHDC7BQ96G42 594 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 DPH2Q9BQC3 489 aaPredicted RBP8.38□□□□□ -1.07
TPM4-203ENST00000586193 WDR18Q9BV38 432 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 GBP3Q9H0R5 595 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 AVENQ9NQS1 362 aaPredicted RBP8.38□□□□□ -1.07
TPM4-203ENST00000586193 ZNF451Q9Y4E5 1061 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 PCDHGC5Q9Y5F6 944 aa8.38□□□□□ -1.07
TPM4-203ENST00000586193 CC2D2AQ9P2K1 1620 aa8.37□□□□□ -1.07
TPM4-203ENST00000586193 NEMP1O14524 444 aa8.37□□□□□ -1.07
TPM4-203ENST00000586193 DLX3O60479 287 aa8.37□□□□□ -1.07
TPM4-203ENST00000586193 EFCAB14O75071 495 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms