RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 HOXC10Q9NYD6 342 aa24.33■■□□□ 1.49
CLPTM1-204ENST00000585961 ALPK3Q96L96 1907 aa24.33■■□□□ 1.49
CLPTM1-204ENST00000585961 MDM2Q00987 491 aaPredicted RBP24.32■■□□□ 1.48
CLPTM1-204ENST00000585961 DPP9Q86TI2 863 aa24.32■■□□□ 1.48
CLPTM1-204ENST00000585961 MOV10L1Q9BXT6 1211 aaKnown RBP24.32■■□□□ 1.48
CLPTM1-204ENST00000585961 LAMA3Q16787 3333 aa24.32■■□□□ 1.48
CLPTM1-204ENST00000585961 CYP2D7A0A087X1C5 515 aa24.31■■□□□ 1.48
CLPTM1-204ENST00000585961 ATN1P54259 1190 aaPredicted RBP24.31■■□□□ 1.48
CLPTM1-204ENST00000585961 GRB14Q14449 540 aa24.31■■□□□ 1.48
CLPTM1-204ENST00000585961 LBX2Q6XYB7 198 aa24.31■■□□□ 1.48
CLPTM1-204ENST00000585961 CLEC10AQ8IUN9 316 aa24.31■■□□□ 1.48
CLPTM1-204ENST00000585961 SIAH1Q8IUQ4 282 aa24.31■■□□□ 1.48
CLPTM1-204ENST00000585961 SPICE1Q8N0Z3 855 aa24.31■■□□□ 1.48
CLPTM1-204ENST00000585961 TRPV1Q8NER1 839 aa24.31■■□□□ 1.48
CLPTM1-204ENST00000585961 ZBTB40Q9NUA8 1239 aa24.31■■□□□ 1.48
CLPTM1-204ENST00000585961 HMMRO75330 724 aa24.3■■□□□ 1.48
CLPTM1-204ENST00000585961 MBD4O95243 580 aa24.3■■□□□ 1.48
CLPTM1-204ENST00000585961 MS4A1P11836 297 aa24.3■■□□□ 1.48
CLPTM1-204ENST00000585961 PLS1Q14651 629 aa24.3■■□□□ 1.48
CLPTM1-204ENST00000585961 ANO1Q5XXA6 986 aa24.3■■□□□ 1.48
CLPTM1-204ENST00000585961 Q7L0L9 218 aa24.3■■□□□ 1.48
CLPTM1-204ENST00000585961 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.3■■□□□ 1.48
CLPTM1-204ENST00000585961 PAG1Q9NWQ8 432 aa24.3■■□□□ 1.48
CLPTM1-204ENST00000585961 DDX20Q9UHI6 824 aaKnown RBP24.3■■□□□ 1.48
CLPTM1-204ENST00000585961 DDX60LQ5H9U9 1706 aaKnown RBP24.3■■□□□ 1.48
CLPTM1-204ENST00000585961 RAB11FIP3O75154 756 aa24.29■■□□□ 1.48
CLPTM1-204ENST00000585961 AKR1B1P15121 316 aa24.29■■□□□ 1.48
CLPTM1-204ENST00000585961 PRAMEF19Q5SWL8 479 aa24.29■■□□□ 1.48
CLPTM1-204ENST00000585961 MYCNP04198 464 aaPredicted RBP24.28■■□□□ 1.48
CLPTM1-204ENST00000585961 HOXC6P09630 235 aa24.28■■□□□ 1.48
CLPTM1-204ENST00000585961 ERCC3P19447 782 aa24.28■■□□□ 1.48
CLPTM1-204ENST00000585961 ADORA2AP29274 412 aa24.28■■□□□ 1.48
CLPTM1-204ENST00000585961 ADD2P35612 726 aa24.28■■□□□ 1.48
CLPTM1-204ENST00000585961 TMEM179Q6ZVK1 233 aa24.28■■□□□ 1.48
CLPTM1-204ENST00000585961 TDHQ8IZJ6 230 aa24.28■■□□□ 1.48
CLPTM1-204ENST00000585961 DEFB123Q8N688 67 aa24.28■■□□□ 1.48
CLPTM1-204ENST00000585961 SPATC1LQ9H0A9 340 aa24.28■■□□□ 1.48
CLPTM1-204ENST00000585961 DNAH12Q6ZR08 3092 aa24.27■■□□□ 1.48
CLPTM1-204ENST00000585961 COBLO75128 1261 aa24.27■■□□□ 1.48
CLPTM1-204ENST00000585961 GJC2Q5T442 439 aaPredicted RBP24.27■■□□□ 1.48
CLPTM1-204ENST00000585961 NCAPG2Q86XI2 1143 aa24.27■■□□□ 1.48
CLPTM1-204ENST00000585961 DDX19BQ9UMR2 479 aa24.27■■□□□ 1.48
CLPTM1-204ENST00000585961 ZBED9Q6R2W3 1325 aa24.27■■□□□ 1.48
CLPTM1-204ENST00000585961 USP17L12C9JPN9 530 aa24.26■■□□□ 1.47
CLPTM1-204ENST00000585961 USP17L21D6R901 530 aa24.26■■□□□ 1.47
CLPTM1-204ENST00000585961 SMARCA5O60264 1052 aaPredicted RBP24.26■■□□□ 1.47
CLPTM1-204ENST00000585961 FLOT1O75955 427 aa24.26■■□□□ 1.47
CLPTM1-204ENST00000585961 ATP5JP18859 108 aa24.26■■□□□ 1.47
CLPTM1-204ENST00000585961 DSG3P32926 999 aa24.26■■□□□ 1.47
CLPTM1-204ENST00000585961 CDK8P49336 464 aa24.26■■□□□ 1.47
CLPTM1-204ENST00000585961 SWAP70Q9UH65 585 aa24.26■■□□□ 1.47
CLPTM1-204ENST00000585961 COL6A3P12111 3177 aa24.25■■□□□ 1.47
CLPTM1-204ENST00000585961 LPAR1Q92633 364 aa24.25■■□□□ 1.47
CLPTM1-204ENST00000585961 ATG4CQ96DT6 458 aa24.25■■□□□ 1.47
CLPTM1-204ENST00000585961 ARHGEF10LQ9HCE6 1279 aa24.25■■□□□ 1.47
CLPTM1-204ENST00000585961 ATP8A2Q9NTI2 1148 aa24.25■■□□□ 1.47
CLPTM1-204ENST00000585961 STRNO43815 780 aa24.24■■□□□ 1.47
CLPTM1-204ENST00000585961 ICA1Q05084 483 aa24.24■■□□□ 1.47
CLPTM1-204ENST00000585961 LRIT3Q3SXY7 679 aa24.24■■□□□ 1.47
CLPTM1-204ENST00000585961 C12orf60Q5U649 245 aa24.24■■□□□ 1.47
CLPTM1-204ENST00000585961 STK11IPQ8N1F8 1099 aa24.24■■□□□ 1.47
CLPTM1-204ENST00000585961 HAUS7Q99871 368 aa24.24■■□□□ 1.47
CLPTM1-204ENST00000585961 TMX2Q9Y320 296 aa24.24■■□□□ 1.47
CLPTM1-204ENST00000585961 SLC4A4Q9Y6R1 1079 aa24.24■■□□□ 1.47
CLPTM1-204ENST00000585961 RAD21O60216 631 aa24.23■■□□□ 1.47
CLPTM1-204ENST00000585961 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.23■■□□□ 1.47
CLPTM1-204ENST00000585961 MSCO60682 206 aa24.22■■□□□ 1.47
CLPTM1-204ENST00000585961 CYBAP13498 195 aa24.22■■□□□ 1.47
CLPTM1-204ENST00000585961 EEF2P13639 858 aaKnown RBP24.22■■□□□ 1.47
CLPTM1-204ENST00000585961 LBHD1Q9BQE6 289 aaPredicted RBP24.22■■□□□ 1.47
CLPTM1-204ENST00000585961 VCPKMTQ9H867 229 aa24.22■■□□□ 1.47
CLPTM1-204ENST00000585961 FBXO28Q9NVF7 368 aa24.22■■□□□ 1.47
CLPTM1-204ENST00000585961 DLL1O00548 723 aa24.21■■□□□ 1.47
CLPTM1-204ENST00000585961 IGHA2P01877 340 aa24.21■■□□□ 1.47
CLPTM1-204ENST00000585961 TMEM132BQ14DG7 1078 aa24.21■■□□□ 1.47
CLPTM1-204ENST00000585961 C20orf194Q5TEA3 1177 aa24.21■■□□□ 1.47
CLPTM1-204ENST00000585961 OLFML2BQ68BL8 750 aa24.21■■□□□ 1.47
CLPTM1-204ENST00000585961 CTR9Q6PD62 1173 aa24.21■■□□□ 1.47
CLPTM1-204ENST00000585961 CCDC17Q96LX7 622 aa24.21■■□□□ 1.47
CLPTM1-204ENST00000585961 PUS7LQ9H0K6 701 aaKnown RBP24.21■■□□□ 1.47
CLPTM1-204ENST00000585961 ATP11BQ9Y2G3 1177 aa24.21■■□□□ 1.47
CLPTM1-204ENST00000585961 DNM1LO00429 736 aa24.2■■□□□ 1.46
CLPTM1-204ENST00000585961 RTP1P59025 263 aa24.2■■□□□ 1.46
CLPTM1-204ENST00000585961 AMOTL1Q8IY63 956 aa24.2■■□□□ 1.46
CLPTM1-204ENST00000585961 MB21D1Q8N884 522 aa24.2■■□□□ 1.46
CLPTM1-204ENST00000585961 ARRDC4Q8NCT1 418 aa24.2■■□□□ 1.46
CLPTM1-204ENST00000585961 SHCBP1Q8NEM2 672 aa24.2■■□□□ 1.46
CLPTM1-204ENST00000585961 MROH8Q9H579 483 aa24.2■■□□□ 1.46
CLPTM1-204ENST00000585961 A0A0C4DFX4 3053 aa24.19■■□□□ 1.46
CLPTM1-204ENST00000585961 SLC39A5Q6ZMH5 540 aa24.19■■□□□ 1.46
CLPTM1-204ENST00000585961 C16orf86Q6ZW13 317 aa24.19■■□□□ 1.46
CLPTM1-204ENST00000585961 FERMT2Q96AC1 680 aa24.19■■□□□ 1.46
CLPTM1-204ENST00000585961 DDRGK1Q96HY6 314 aa24.19■■□□□ 1.46
CLPTM1-204ENST00000585961 MTMR10Q9NXD2 777 aa24.19■■□□□ 1.46
CLPTM1-204ENST00000585961 SLC5A4Q9NY91 659 aa24.19■■□□□ 1.46
CLPTM1-204ENST00000585961 RCAN3Q9UKA8 241 aa24.19■■□□□ 1.46
CLPTM1-204ENST00000585961 PGK2P07205 417 aa24.18■■□□□ 1.46
CLPTM1-204ENST00000585961 FCER1AP12319 257 aa24.18■■□□□ 1.46
CLPTM1-204ENST00000585961 UBE3CQ15386 1083 aa24.18■■□□□ 1.46
CLPTM1-204ENST00000585961 GPR153Q6NV75 609 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms