RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 MAP4K4O95819 1239 aaPredicted RBP11.26□□□□□ -0.61
SDF2-203ENST00000585749 LDHCP07864 332 aa11.26□□□□□ -0.61
SDF2-203ENST00000585749 HOXA7P31268 230 aaPredicted RBP11.26□□□□□ -0.61
SDF2-203ENST00000585749 CAP2P40123 477 aa11.26□□□□□ -0.61
SDF2-203ENST00000585749 BTDP43251 543 aa11.26□□□□□ -0.61
SDF2-203ENST00000585749 HERVK_113P62684 666 aa11.26□□□□□ -0.61
SDF2-203ENST00000585749 IRX3P78415 501 aaPredicted RBP11.26□□□□□ -0.61
SDF2-203ENST00000585749 Q3C1V9 767 aa11.26□□□□□ -0.61
SDF2-203ENST00000585749 TBC1D9Q6ZT07 1266 aa11.26□□□□□ -0.61
SDF2-203ENST00000585749 GPR142Q7Z601 462 aa11.26□□□□□ -0.61
SDF2-203ENST00000585749 CLASRPQ8N2M8 674 aaKnown RBP11.26□□□□□ -0.61
SDF2-203ENST00000585749 BBXQ8WY36 941 aaPredicted RBP11.26□□□□□ -0.61
SDF2-203ENST00000585749 IL1RAPL2Q9NP60 686 aa11.26□□□□□ -0.61
SDF2-203ENST00000585749 LRP2BPQ9P2M1 347 aa11.26□□□□□ -0.61
SDF2-203ENST00000585749 RBPJLQ9UBG7 517 aa11.26□□□□□ -0.61
SDF2-203ENST00000585749 USP17L5A8MUK1 530 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 DNM1LO00429 736 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 CYP2E1P05181 493 aaPredicted RBP11.25□□□□□ -0.61
SDF2-203ENST00000585749 ZAP70P43403 619 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 RHBDL3P58872 404 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 ERVK-9P63128 1117 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 ERVK-24P63145 666 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 MTMR2Q13614 643 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 PLEKHH3Q7Z736 793 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 LPAR1Q92633 364 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 BADQ92934 168 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 SNRKQ9NRH2 765 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 FLRT1Q9NZU1 646 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 RAI14Q9P0K7 980 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 DDX20Q9UHI6 824 aaKnown RBP11.25□□□□□ -0.61
SDF2-203ENST00000585749 ATP11BQ9Y2G3 1177 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 SIPA1L1O43166 1804 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 FOCADQ5VW36 1801 aa11.25□□□□□ -0.61
SDF2-203ENST00000585749 NCOR1O75376 2440 aa11.24□□□□□ -0.61
SDF2-203ENST00000585749 CDK5RAP2Q96SN8 1893 aa11.24□□□□□ -0.61
SDF2-203ENST00000585749 HOXB3P14651 431 aaPredicted RBP11.24□□□□□ -0.61
SDF2-203ENST00000585749 BACE1P56817 501 aa11.24□□□□□ -0.61
SDF2-203ENST00000585749 GRIN2CQ14957 1233 aa11.24□□□□□ -0.61
SDF2-203ENST00000585749 WDR18Q9BV38 432 aa11.24□□□□□ -0.61
SDF2-203ENST00000585749 AS3MTQ9HBK9 375 aa11.24□□□□□ -0.61
SDF2-203ENST00000585749 PRDM5Q9NQX1 630 aaPredicted RBP11.24□□□□□ -0.61
SDF2-203ENST00000585749 BDP1A6H8Y1 2624 aa11.24□□□□□ -0.61
SDF2-203ENST00000585749 C2orf72A6NCS6 295 aa11.23□□□□□ -0.61
SDF2-203ENST00000585749 APBB1O00213 710 aa11.23□□□□□ -0.61
SDF2-203ENST00000585749 MSCO60682 206 aa11.23□□□□□ -0.61
SDF2-203ENST00000585749 IFIT2P09913 472 aaKnown RBP11.23□□□□□ -0.61
SDF2-203ENST00000585749 MAP2K5Q13163 448 aa11.23□□□□□ -0.61
SDF2-203ENST00000585749 SNX17Q15036 470 aa11.23□□□□□ -0.61
SDF2-203ENST00000585749 NAA16Q6N069 864 aaPredicted RBP11.23□□□□□ -0.61
SDF2-203ENST00000585749 TMED8Q6PL24 325 aaPredicted RBP11.23□□□□□ -0.61
SDF2-203ENST00000585749 SLC39A5Q6ZMH5 540 aa11.23□□□□□ -0.61
SDF2-203ENST00000585749 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.23□□□□□ -0.61
SDF2-203ENST00000585749 LRRCC1Q9C099 1032 aa11.23□□□□□ -0.61
SDF2-203ENST00000585749 PIH1D3Q9NQM4 214 aaKnown RBP11.23□□□□□ -0.61
SDF2-203ENST00000585749 PDLIM7Q9NR12 457 aa11.23□□□□□ -0.61
SDF2-203ENST00000585749 MAP3K12Q12852 859 aa11.22□□□□□ -0.61
SDF2-203ENST00000585749 TRIM60Q495X7 471 aa11.22□□□□□ -0.61
SDF2-203ENST00000585749 MFSD14CQ5VZR4 134 aa11.22□□□□□ -0.61
SDF2-203ENST00000585749 SH3RF1Q7Z6J0 888 aa11.22□□□□□ -0.61
SDF2-203ENST00000585749 CCAR1Q8IX12 1150 aaKnown RBP11.22□□□□□ -0.61
SDF2-203ENST00000585749 EDC3Q96F86 508 aaKnown RBP11.22□□□□□ -0.61
SDF2-203ENST00000585749 NOL10Q9BSC4 688 aaKnown RBP11.22□□□□□ -0.61
SDF2-203ENST00000585749 PAGR1Q9BTK6 254 aa11.22□□□□□ -0.61
SDF2-203ENST00000585749 TMOD4Q9NZQ9 345 aa11.22□□□□□ -0.61
SDF2-203ENST00000585749 XIRP2A4UGR9 3374 aa11.22□□□□□ -0.61
SDF2-203ENST00000585749 TRIM43BA6NCK2 446 aa11.21□□□□□ -0.61
SDF2-203ENST00000585749 BAG3O95817 575 aa11.21□□□□□ -0.61
SDF2-203ENST00000585749 IGHA2P01877 340 aa11.21□□□□□ -0.61
SDF2-203ENST00000585749 CNGA1P29973 690 aa11.21□□□□□ -0.61
SDF2-203ENST00000585749 PPP4CP60510 307 aa11.21□□□□□ -0.61
SDF2-203ENST00000585749 JAG1P78504 1218 aa11.21□□□□□ -0.61
SDF2-203ENST00000585749 TTF1Q15361 905 aaPredicted RBP11.21□□□□□ -0.61
SDF2-203ENST00000585749 GJC2Q5T442 439 aaPredicted RBP11.21□□□□□ -0.61
SDF2-203ENST00000585749 CERS3Q8IU89 383 aa11.21□□□□□ -0.61
SDF2-203ENST00000585749 TRPV1Q8NER1 839 aa11.21□□□□□ -0.61
SDF2-203ENST00000585749 ADAMTS19Q8TE59 1207 aa11.21□□□□□ -0.61
SDF2-203ENST00000585749 GTF3C2Q8WUA4 911 aaPredicted RBP11.21□□□□□ -0.61
SDF2-203ENST00000585749 ATXN2LQ8WWM7 1075 aaKnown RBP11.21□□□□□ -0.61
SDF2-203ENST00000585749 TRIM43Q96BQ3 446 aaPredicted RBP11.21□□□□□ -0.61
SDF2-203ENST00000585749 RNPC3Q96LT9 517 aaKnown RBP11.21□□□□□ -0.61
SDF2-203ENST00000585749 DCTPP1Q9H773 170 aa11.21□□□□□ -0.61
SDF2-203ENST00000585749 POTEMA6NI47 508 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 C19orf81C9J6K1 198 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 CNMDO75829 334 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 IDH1O75874 414 aaKnown RBP11.2□□□□□ -0.62
SDF2-203ENST00000585749 HOXC6P09630 235 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 CYBAP13498 195 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 DNAJB2P25686 324 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 ITGB8P26012 769 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 EPHB4P54760 987 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 ADGRA1Q86SQ6 560 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 TEX11Q8IYF3 940 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 ASB2Q96Q27 587 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 CRBNQ96SW2 442 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 ANTXR1Q9H6X2 564 aa11.2□□□□□ -0.62
SDF2-203ENST00000585749 AATFQ9NY61 560 aaKnown RBP eCLIP11.2□□□□□ -0.62
SDF2-203ENST00000585749 HERC5Q9UII4 1024 aaKnown RBP11.2□□□□□ -0.62
SDF2-203ENST00000585749 PCDHB15Q9Y5E8 787 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms