RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 SCYL3Q8IZE3 742 aa19.81■□□□□ 0.76
HMG20B-215ENST00000585741 IGDCC4Q8TDY8 1250 aa19.81■□□□□ 0.76
HMG20B-215ENST00000585741 CEP95Q96GE4 821 aa19.81■□□□□ 0.76
HMG20B-215ENST00000585741 SH2D4AQ9H788 454 aa19.81■□□□□ 0.76
HMG20B-215ENST00000585741 AS3MTQ9HBK9 375 aa19.81■□□□□ 0.76
HMG20B-215ENST00000585741 ZNF112Q9UJU3 913 aa19.81■□□□□ 0.76
HMG20B-215ENST00000585741 SLC12A7Q9Y666 1083 aa19.81■□□□□ 0.76
HMG20B-215ENST00000585741 CATIPQ7Z7H3 387 aa19.8■□□□□ 0.76
HMG20B-215ENST00000585741 ENAHQ8N8S7 591 aaPredicted RBP19.8■□□□□ 0.76
HMG20B-215ENST00000585741 ZKSCAN4Q969J2 545 aaPredicted RBP19.8■□□□□ 0.76
HMG20B-215ENST00000585741 ZSCAN31Q96LW9 406 aaPredicted RBP19.8■□□□□ 0.76
HMG20B-215ENST00000585741 IL17RBQ9NRM6 502 aa19.8■□□□□ 0.76
HMG20B-215ENST00000585741 MTMR4Q9NYA4 1195 aa19.8■□□□□ 0.76
HMG20B-215ENST00000585741 CLIP2Q9UDT6 1046 aa19.8■□□□□ 0.76
HMG20B-215ENST00000585741 LIMCH1Q9UPQ0 1083 aa19.8■□□□□ 0.76
HMG20B-215ENST00000585741 KLF18A0A0U1RQI7 1052 aa19.79■□□□□ 0.76
HMG20B-215ENST00000585741 USP17L5A8MUK1 530 aa19.79■□□□□ 0.76
HMG20B-215ENST00000585741 RAD21O60216 631 aa19.79■□□□□ 0.76
HMG20B-215ENST00000585741 TOP1P11387 765 aaKnown RBP19.79■□□□□ 0.76
HMG20B-215ENST00000585741 APOBRQ0VD83 1088 aa19.79■□□□□ 0.76
HMG20B-215ENST00000585741 SREBF2Q12772 1141 aa19.79■□□□□ 0.76
HMG20B-215ENST00000585741 COL9A3Q14050 684 aaPredicted RBP19.79■□□□□ 0.76
HMG20B-215ENST00000585741 TOB2Q14106 344 aaPredicted RBP19.79■□□□□ 0.76
HMG20B-215ENST00000585741 RRP1BQ14684 758 aaKnown RBP19.79■□□□□ 0.76
HMG20B-215ENST00000585741 FBXL16Q8N461 479 aa19.79■□□□□ 0.76
HMG20B-215ENST00000585741 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.79■□□□□ 0.76
HMG20B-215ENST00000585741 NKX2-3Q8TAU0 364 aa19.79■□□□□ 0.76
HMG20B-215ENST00000585741 LY9Q9HBG7 655 aa19.79■□□□□ 0.76
HMG20B-215ENST00000585741 NYAP2Q9P242 653 aa19.79■□□□□ 0.76
HMG20B-215ENST00000585741 HTTP42858 3142 aa19.78■□□□□ 0.76
HMG20B-215ENST00000585741 NOL9Q5SY16 702 aaKnown RBP19.78■□□□□ 0.76
HMG20B-215ENST00000585741 NUP133Q8WUM0 1156 aa19.78■□□□□ 0.76
HMG20B-215ENST00000585741 SNX21Q969T3 373 aa19.78■□□□□ 0.76
HMG20B-215ENST00000585741 CHMP4CQ96CF2 233 aa19.78■□□□□ 0.76
HMG20B-215ENST00000585741 CLMNQ96JQ2 1002 aa19.78■□□□□ 0.76
HMG20B-215ENST00000585741 FEZ1Q99689 392 aa19.78■□□□□ 0.76
HMG20B-215ENST00000585741 LARP6Q9BRS8 491 aaKnown RBP19.78■□□□□ 0.76
HMG20B-215ENST00000585741 GPHNQ9NQX3 736 aaPredicted RBP19.78■□□□□ 0.76
HMG20B-215ENST00000585741 MTMR7Q9Y216 660 aa19.78■□□□□ 0.76
HMG20B-215ENST00000585741 IGKV6D-41A0A0C4DH26 115 aa19.77■□□□□ 0.76
HMG20B-215ENST00000585741 GOLGA8BA8MQT2 603 aa19.77■□□□□ 0.76
HMG20B-215ENST00000585741 CALM1P0DP23 149 aa19.77■□□□□ 0.76
HMG20B-215ENST00000585741 CALM2P0DP24 149 aa19.77■□□□□ 0.76
HMG20B-215ENST00000585741 CALM3P0DP25 149 aa19.77■□□□□ 0.76
HMG20B-215ENST00000585741 EEF2P13639 858 aaKnown RBP19.77■□□□□ 0.76
HMG20B-215ENST00000585741 SEC23AQ15436 765 aa19.77■□□□□ 0.76
HMG20B-215ENST00000585741 SHROOM1Q2M3G4 852 aaPredicted RBP19.77■□□□□ 0.76
HMG20B-215ENST00000585741 FBXO46Q6PJ61 603 aaPredicted RBP19.77■□□□□ 0.76
HMG20B-215ENST00000585741 SGMS1Q86VZ5 419 aa19.77■□□□□ 0.76
HMG20B-215ENST00000585741 CLEC10AQ8IUN9 316 aa19.77■□□□□ 0.76
HMG20B-215ENST00000585741 TMEM47Q9BQJ4 181 aa19.77■□□□□ 0.76
HMG20B-215ENST00000585741 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.77■□□□□ 0.76
HMG20B-215ENST00000585741 AGXT2Q9BYV1 514 aa19.77■□□□□ 0.76
HMG20B-215ENST00000585741 TBC1D2Q9BYX2 928 aa19.77■□□□□ 0.76
HMG20B-215ENST00000585741 SLKQ9H2G2 1235 aaPredicted RBP19.77■□□□□ 0.76
HMG20B-215ENST00000585741 SH2B1Q9NRF2 756 aaPredicted RBP19.77■□□□□ 0.76
HMG20B-215ENST00000585741 ISY1Q9ULR0 285 aaKnown RBP19.77■□□□□ 0.76
HMG20B-215ENST00000585741 ZBTB43O43298 467 aa19.76■□□□□ 0.75
HMG20B-215ENST00000585741 FKTNO75072 461 aa19.76■□□□□ 0.75
HMG20B-215ENST00000585741 HSP90AA1P07900 732 aaKnown RBP19.76■□□□□ 0.75
HMG20B-215ENST00000585741 STK3Q13188 491 aa19.76■□□□□ 0.75
HMG20B-215ENST00000585741 VGLL4Q14135 290 aa19.76■□□□□ 0.75
HMG20B-215ENST00000585741 ZNF654Q8IZM8 581 aa19.76■□□□□ 0.75
HMG20B-215ENST00000585741 PNMA1Q8ND90 353 aa19.76■□□□□ 0.75
HMG20B-215ENST00000585741 ANKS1AQ92625 1134 aa19.76■□□□□ 0.75
HMG20B-215ENST00000585741 WNK4Q96J92 1243 aa19.76■□□□□ 0.75
HMG20B-215ENST00000585741 GOPCQ9HD26 462 aa19.76■□□□□ 0.75
HMG20B-215ENST00000585741 UNCXA6NJT0 531 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 GOLGA8AA7E2F4 631 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 K7ELQ4 463 aaPredicted RBP19.75■□□□□ 0.75
HMG20B-215ENST00000585741 IGF2BP3O00425 579 aaKnown RBP eCLIP19.75■□□□□ 0.75
HMG20B-215ENST00000585741 DDAH1O94760 285 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 PTPRAP18433 802 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 GUCY1A2P33402 732 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 GJA5P36382 358 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 METAP2P50579 478 aaKnown RBP eCLIP19.75■□□□□ 0.75
HMG20B-215ENST00000585741 JAG1P78504 1218 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.75■□□□□ 0.75
HMG20B-215ENST00000585741 MICU3Q86XE3 530 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 IFNL1Q8IU54 200 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 LRRC47Q8N1G4 583 aaKnown RBP19.75■□□□□ 0.75
HMG20B-215ENST00000585741 CTCFLQ8NI51 663 aaPredicted RBP19.75■□□□□ 0.75
HMG20B-215ENST00000585741 SLC10A4Q96EP9 437 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 ZNF274Q96GC6 653 aaPredicted RBP19.75■□□□□ 0.75
HMG20B-215ENST00000585741 ELP3Q9H9T3 547 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 ZHX2Q9Y6X8 837 aa19.75■□□□□ 0.75
HMG20B-215ENST00000585741 MANSC4A6NHS7 340 aaPredicted RBP19.74■□□□□ 0.75
HMG20B-215ENST00000585741 ZBTB48P10074 688 aaPredicted RBP19.74■□□□□ 0.75
HMG20B-215ENST00000585741 RCSD1Q6JBY9 416 aa19.74■□□□□ 0.75
HMG20B-215ENST00000585741 APOA5Q6Q788 366 aa19.74■□□□□ 0.75
HMG20B-215ENST00000585741 SENP2Q9HC62 589 aa19.74■□□□□ 0.75
HMG20B-215ENST00000585741 TPCN1Q9ULQ1 816 aa19.74■□□□□ 0.75
HMG20B-215ENST00000585741 CCDC196A0A1B0GTZ2 297 aa19.73■□□□□ 0.75
HMG20B-215ENST00000585741 CPLX1O14810 134 aa19.73■□□□□ 0.75
HMG20B-215ENST00000585741 DHX16O60231 1041 aaKnown RBP19.73■□□□□ 0.75
HMG20B-215ENST00000585741 CD2BP2O95400 341 aaKnown RBP19.73■□□□□ 0.75
HMG20B-215ENST00000585741 ALDH1A1P00352 501 aa19.73■□□□□ 0.75
HMG20B-215ENST00000585741 KIF5BP33176 963 aa19.73■□□□□ 0.75
HMG20B-215ENST00000585741 USP14P54578 494 aa19.73■□□□□ 0.75
HMG20B-215ENST00000585741 CPLX2Q6PUV4 134 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms