RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 WDR78Q5VTH9 848 aa17.54■□□□□ 0.4
SDF2-202ENST00000585428 MOV10L1Q9BXT6 1211 aaKnown RBP17.54■□□□□ 0.4
SDF2-202ENST00000585428 DDX60LQ5H9U9 1706 aaKnown RBP17.54■□□□□ 0.4
SDF2-202ENST00000585428 DLL1O00548 723 aa17.53■□□□□ 0.4
SDF2-202ENST00000585428 OLFML2BQ68BL8 750 aa17.53■□□□□ 0.4
SDF2-202ENST00000585428 Q7L0L9 218 aa17.53■□□□□ 0.4
SDF2-202ENST00000585428 SIRT2Q8IXJ6 389 aa17.53■□□□□ 0.4
SDF2-202ENST00000585428 RPAP2Q8IXW5 612 aaPredicted RBP17.53■□□□□ 0.4
SDF2-202ENST00000585428 CLASRPQ8N2M8 674 aaKnown RBP17.53■□□□□ 0.4
SDF2-202ENST00000585428 SDR42E1Q8WUS8 393 aa17.53■□□□□ 0.4
SDF2-202ENST00000585428 MTMR10Q9NXD2 777 aa17.53■□□□□ 0.4
SDF2-202ENST00000585428 GOLIM4O00461 696 aa17.52■□□□□ 0.4
SDF2-202ENST00000585428 CYBAP13498 195 aa17.52■□□□□ 0.4
SDF2-202ENST00000585428 CNGA1P29973 690 aa17.52■□□□□ 0.4
SDF2-202ENST00000585428 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.4
SDF2-202ENST00000585428 DPP9Q86TI2 863 aa17.52■□□□□ 0.4
SDF2-202ENST00000585428 LCORLQ8N3X6 602 aa17.52■□□□□ 0.4
SDF2-202ENST00000585428 SHCBP1Q8NEM2 672 aa17.52■□□□□ 0.4
SDF2-202ENST00000585428 KIF1BPQ96EK5 621 aa17.52■□□□□ 0.4
SDF2-202ENST00000585428 SPATC1LQ9H0A9 340 aa17.52■□□□□ 0.4
SDF2-202ENST00000585428 POTEB2H3BUK9 544 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 DNM1LO00429 736 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 MPHOSPH10O00566 681 aaKnown RBP17.51■□□□□ 0.39
SDF2-202ENST00000585428 COBLO75128 1261 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 MYCNP04198 464 aaPredicted RBP17.51■□□□□ 0.39
SDF2-202ENST00000585428 CYP2D6P10635 497 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 ADORA2AP29274 412 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 DSG3P32926 999 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 TMEM179Q6ZVK1 233 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 MIER1Q8N108 512 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 DYNLL2Q96FJ2 89 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 SWAP70Q9UH65 585 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 STXBP5LQ9Y2K9 1186 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 TMX2Q9Y320 296 aa17.51■□□□□ 0.39
SDF2-202ENST00000585428 PRKAB2O43741 272 aa17.5■□□□□ 0.39
SDF2-202ENST00000585428 IFIT2P09913 472 aaKnown RBP17.5■□□□□ 0.39
SDF2-202ENST00000585428 ERCC3P19447 782 aa17.5■□□□□ 0.39
SDF2-202ENST00000585428 ABRAQ8N0Z2 381 aa17.5■□□□□ 0.39
SDF2-202ENST00000585428 MB21D1Q8N884 522 aa17.5■□□□□ 0.39
SDF2-202ENST00000585428 SLC44A5Q8NCS7 719 aa17.5■□□□□ 0.39
SDF2-202ENST00000585428 ATP8A2Q9NTI2 1148 aa17.5■□□□□ 0.39
SDF2-202ENST00000585428 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
SDF2-202ENST00000585428 MYH1P12882 1939 aa17.5■□□□□ 0.39
SDF2-202ENST00000585428 RAB11FIP3O75154 756 aa17.49■□□□□ 0.39
SDF2-202ENST00000585428 SLFNL1Q499Z3 407 aa17.49■□□□□ 0.39
SDF2-202ENST00000585428 ARRDC4Q8NCT1 418 aa17.49■□□□□ 0.39
SDF2-202ENST00000585428 DNAJC2Q99543 621 aaKnown RBP17.49■□□□□ 0.39
SDF2-202ENST00000585428 TANGO6Q9C0B7 1094 aa17.49■□□□□ 0.39
SDF2-202ENST00000585428 MROH8Q9H579 483 aa17.49■□□□□ 0.39
SDF2-202ENST00000585428 ARMT1Q9H993 441 aa17.49■□□□□ 0.39
SDF2-202ENST00000585428 ADAMTS5Q9UNA0 930 aa17.49■□□□□ 0.39
SDF2-202ENST00000585428 LAMA2P24043 3122 aaKnown RBP17.48■□□□□ 0.39
SDF2-202ENST00000585428 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
SDF2-202ENST00000585428 APBB1O00213 710 aa17.48■□□□□ 0.39
SDF2-202ENST00000585428 SEPT4O43236 478 aa17.48■□□□□ 0.39
SDF2-202ENST00000585428 MS4A1P11836 297 aa17.48■□□□□ 0.39
SDF2-202ENST00000585428 AKR1B1P15121 316 aa17.48■□□□□ 0.39
SDF2-202ENST00000585428 ATP5JP18859 108 aa17.48■□□□□ 0.39
SDF2-202ENST00000585428 ADD2P35612 726 aa17.48■□□□□ 0.39
SDF2-202ENST00000585428 ATN1P54259 1190 aaPredicted RBP17.48■□□□□ 0.39
SDF2-202ENST00000585428 GJC2Q5T442 439 aaPredicted RBP17.48■□□□□ 0.39
SDF2-202ENST00000585428 C12orf60Q5U649 245 aa17.48■□□□□ 0.39
SDF2-202ENST00000585428 FAM109BQ6ICB4 259 aaPredicted RBP17.48■□□□□ 0.39
SDF2-202ENST00000585428 SLC39A5Q6ZMH5 540 aa17.48■□□□□ 0.39
SDF2-202ENST00000585428 CCDC17Q96LX7 622 aa17.48■□□□□ 0.39
SDF2-202ENST00000585428 PAG1Q9NWQ8 432 aa17.48■□□□□ 0.39
SDF2-202ENST00000585428 CDK8P49336 464 aa17.47■□□□□ 0.39
SDF2-202ENST00000585428 PRAMEF19Q5SWL8 479 aa17.47■□□□□ 0.39
SDF2-202ENST00000585428 BOLA2Q9H3K6 86 aa17.47■□□□□ 0.39
SDF2-202ENST00000585428 VCPKMTQ9H867 229 aa17.47■□□□□ 0.39
SDF2-202ENST00000585428 SLC5A4Q9NY91 659 aa17.47■□□□□ 0.39
SDF2-202ENST00000585428 USP17L12C9JPN9 530 aa17.46■□□□□ 0.39
SDF2-202ENST00000585428 USP17L21D6R901 530 aa17.46■□□□□ 0.39
SDF2-202ENST00000585428 HMMRO75330 724 aa17.46■□□□□ 0.39
SDF2-202ENST00000585428 FLOT1O75955 427 aa17.46■□□□□ 0.39
SDF2-202ENST00000585428 RTP1P59025 263 aa17.46■□□□□ 0.39
SDF2-202ENST00000585428 SPICE1Q8N0Z3 855 aa17.46■□□□□ 0.39
SDF2-202ENST00000585428 ATG4CQ96DT6 458 aa17.46■□□□□ 0.39
SDF2-202ENST00000585428 HAUS7Q99871 368 aa17.46■□□□□ 0.39
SDF2-202ENST00000585428 LBHD1Q9BQE6 289 aaPredicted RBP17.46■□□□□ 0.39
SDF2-202ENST00000585428 ARHGEF10LQ9HCE6 1279 aa17.46■□□□□ 0.39
SDF2-202ENST00000585428 CYP2D7A0A087X1C5 515 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 MBD4O95243 580 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 CHGBP05060 677 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 ICA1Q05084 483 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 PLS1Q14651 629 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 TMEM132BQ14DG7 1078 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 UBE3CQ15386 1083 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 C16orf86Q6ZW13 317 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 NCAPG2Q86XI2 1143 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 CLEC10AQ8IUN9 316 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 MAML3Q96JK9 1138 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 DDX19BQ9UMR2 479 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 ZBED9Q6R2W3 1325 aa17.45■□□□□ 0.38
SDF2-202ENST00000585428 WDR46O15213 610 aaKnown RBP17.44■□□□□ 0.38
SDF2-202ENST00000585428 SLC25A27O95847 323 aa17.44■□□□□ 0.38
SDF2-202ENST00000585428 FCER1AP12319 257 aa17.44■□□□□ 0.38
SDF2-202ENST00000585428 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
SDF2-202ENST00000585428 SNX17Q15036 470 aa17.44■□□□□ 0.38
SDF2-202ENST00000585428 C1orf53Q5VUE5 145 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms