RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 TCEANC2Q96MN5 208 aa15.09■□□□□ 0.01
TRIM47-202ENST00000585333 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRIM47-202ENST00000585333 LRRC2Q9BYS8 371 aa15.09■□□□□ 0.01
TRIM47-202ENST00000585333 SPDYE5A6NIY4 337 aa15.08■□□□□ 0
TRIM47-202ENST00000585333 GOLGA8AA7E2F4 631 aa15.08■□□□□ 0
TRIM47-202ENST00000585333 TRAF5O00463 557 aa15.08■□□□□ 0
TRIM47-202ENST00000585333 PFKFB2O60825 505 aa15.08■□□□□ 0
TRIM47-202ENST00000585333 APOBRQ0VD83 1088 aa15.08■□□□□ 0
TRIM47-202ENST00000585333 PRKG1Q13976 671 aa15.08■□□□□ 0
TRIM47-202ENST00000585333 RTN1Q16799 776 aa15.08■□□□□ 0
TRIM47-202ENST00000585333 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.08■□□□□ 0
TRIM47-202ENST00000585333 INTS4Q96HW7 963 aaKnown RBP15.08■□□□□ 0
TRIM47-202ENST00000585333 GMCL1Q96IK5 515 aa15.08■□□□□ 0
TRIM47-202ENST00000585333 LLPHQ9BRT6 129 aaKnown RBP15.08■□□□□ 0
TRIM47-202ENST00000585333 TMOD4Q9NZQ9 345 aa15.08■□□□□ 0
TRIM47-202ENST00000585333 PASKQ96RG2 1323 aa15.08■□□□□ 0
TRIM47-202ENST00000585333 TRPM7Q96QT4 1865 aa15.08■□□□□ 0
TRIM47-202ENST00000585333 CXCL11O14625 94 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 NMT2O60551 498 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 PARP1P09874 1014 aaKnown RBP15.07■□□□□ 0
TRIM47-202ENST00000585333 SMARCA1P28370 1054 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 PDIA3P30101 505 aaKnown RBP15.07■□□□□ 0
TRIM47-202ENST00000585333 GUCY1A2P33402 732 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 TRAF1Q13077 416 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 PPIL2Q13356 520 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 USP17L2Q6R6M4 530 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 MICU3Q86XE3 530 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 FANCBQ8NB91 859 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 NUP133Q8WUM0 1156 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 ZKSCAN4Q969J2 545 aaPredicted RBP15.07■□□□□ 0
TRIM47-202ENST00000585333 TMX3Q96JJ7 454 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 HHIPL1Q96JK4 782 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 VCPKMTQ9H867 229 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 SNCAIPQ9Y6H5 919 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 ZHX2Q9Y6X8 837 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 ATAD5Q96QE3 1844 aa15.07■□□□□ 0
TRIM47-202ENST00000585333 ZBTB48P10074 688 aaPredicted RBP15.06■□□□□ 0
TRIM47-202ENST00000585333 SLC1A4P43007 532 aa15.06■□□□□ 0
TRIM47-202ENST00000585333 BACE1P56817 501 aa15.06■□□□□ 0
TRIM47-202ENST00000585333 HMGN5P82970 282 aaKnown RBP15.06■□□□□ 0
TRIM47-202ENST00000585333 TROAPQ12815 778 aa15.06■□□□□ 0
TRIM47-202ENST00000585333 PABPC4Q13310 644 aaKnown RBP eCLIP15.06■□□□□ 0
TRIM47-202ENST00000585333 TRIM22Q8IYM9 498 aa15.06■□□□□ 0
TRIM47-202ENST00000585333 GTF3C6Q969F1 213 aa15.06■□□□□ 0
TRIM47-202ENST00000585333 PNMA2Q9UL42 364 aa15.06■□□□□ 0
TRIM47-202ENST00000585333 TPCN1Q9ULQ1 816 aa15.06■□□□□ 0
TRIM47-202ENST00000585333 TMEM88BA6NKF7 163 aa15.05■□□□□ -0
TRIM47-202ENST00000585333 F5H6K3 240 aa15.05■□□□□ -0
TRIM47-202ENST00000585333 WDR46O15213 610 aaKnown RBP15.05■□□□□ -0
TRIM47-202ENST00000585333 SNHG28P0DPA3 235 aa15.05■□□□□ -0
TRIM47-202ENST00000585333 FDX1P10109 184 aa15.05■□□□□ -0
TRIM47-202ENST00000585333 AKAP17AQ02040 695 aaKnown RBP15.05■□□□□ -0
TRIM47-202ENST00000585333 KLRC3Q07444 240 aa15.05■□□□□ -0
TRIM47-202ENST00000585333 RRP1BQ14684 758 aaKnown RBP15.05■□□□□ -0
TRIM47-202ENST00000585333 GRM4Q14833 912 aa15.05■□□□□ -0
TRIM47-202ENST00000585333 SLFN13Q68D06 897 aa15.05■□□□□ -0
TRIM47-202ENST00000585333 NOL8Q76FK4 1167 aaKnown RBP15.05■□□□□ -0
TRIM47-202ENST00000585333 FASTKD5Q7L8L6 764 aaKnown RBP15.05■□□□□ -0
TRIM47-202ENST00000585333 LRRC47Q8N1G4 583 aaKnown RBP15.05■□□□□ -0
TRIM47-202ENST00000585333 CHURC1Q8WUH1 139 aa15.05■□□□□ -0
TRIM47-202ENST00000585333 WASF1Q92558 559 aa15.05■□□□□ -0
TRIM47-202ENST00000585333 C12orf42Q96LP6 360 aa15.05■□□□□ -0
TRIM47-202ENST00000585333 UBE2Q2LH0YL09 131 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 RAD21O60216 631 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 PLA2G6O60733 806 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 PDHBP11177 359 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 HUNKP57058 714 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 SPP2Q13103 211 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 SNAPC2Q13487 334 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 CUL4AQ13619 759 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 ME3Q16798 604 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 CCDC96Q2M329 555 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 SH3D19Q5HYK7 790 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 FAM160B2Q86V87 743 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 PROCA1Q8NCQ7 364 aaPredicted RBP15.04■□□□□ -0
TRIM47-202ENST00000585333 CCDC102AQ96A19 550 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 ELP3Q9H9T3 547 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 CWC22Q9HCG8 908 aaKnown RBP15.04■□□□□ -0
TRIM47-202ENST00000585333 BRPF3Q9ULD4 1205 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 AFG3L2Q9Y4W6 797 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 MYH4Q9Y623 1939 aa15.04■□□□□ -0
TRIM47-202ENST00000585333 SLURP2P0DP57 97 aa15.03■□□□□ -0
TRIM47-202ENST00000585333 BMP3P12645 472 aa15.03■□□□□ -0
TRIM47-202ENST00000585333 PDCP20941 246 aa15.03■□□□□ -0
TRIM47-202ENST00000585333 GTF2A2P52657 109 aa15.03■□□□□ -0
TRIM47-202ENST00000585333 MTMR2Q13614 643 aa15.03■□□□□ -0
TRIM47-202ENST00000585333 FAM177A1Q8N128 213 aaPredicted RBP15.03■□□□□ -0
TRIM47-202ENST00000585333 OPTNQ96CV9 577 aa15.03■□□□□ -0
TRIM47-202ENST00000585333 OTUD5Q96G74 571 aa15.03■□□□□ -0
TRIM47-202ENST00000585333 GPHNQ9NQX3 736 aaPredicted RBP15.03■□□□□ -0
TRIM47-202ENST00000585333 FEM1BQ9UK73 627 aa15.03■□□□□ -0
TRIM47-202ENST00000585333 ISY1Q9ULR0 285 aaKnown RBP15.03■□□□□ -0
TRIM47-202ENST00000585333 KCNH4Q9UQ05 1017 aa15.03■□□□□ -0
TRIM47-202ENST00000585333 TLL2Q9Y6L7 1015 aa15.03■□□□□ -0
TRIM47-202ENST00000585333 PALM3A6NDB9 673 aaPredicted RBP15.02■□□□□ -0
TRIM47-202ENST00000585333 TRIM75PA6NK02 468 aa15.02■□□□□ -0
TRIM47-202ENST00000585333 NDUFB10O96000 172 aa15.02■□□□□ -0
TRIM47-202ENST00000585333 CETPP11597 493 aa15.02■□□□□ -0
TRIM47-202ENST00000585333 IFNAR1P17181 557 aa15.02■□□□□ -0
TRIM47-202ENST00000585333 XBP1P17861 261 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms