RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PPFIBP1Q86W92 1011 aa16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 ADGRG1Q9Y653 693 aa16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 BAZ2AQ9UIF9 1905 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 DLEC1Q9Y238 1755 aa16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 CYP2D7A0A087X1C5 515 aa16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 DDAH1O94760 285 aa16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 ATP6V1AP38606 617 aa16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 ATP2C1P98194 919 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 KARSQ15046 597 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 ZNF174Q15697 407 aa16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 TTC38Q5R3I4 469 aa16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 TMTC3Q6ZXV5 915 aa16.12■□□□□ 0.17
CDK5RAP3-237ENST00000585163 DYNLL1P63167 89 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 NOM1Q5C9Z4 860 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 RAD9BQ6WBX8 426 aa16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 SMYD4Q8IYR2 804 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 CCDC12Q8WUD4 166 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 EPC1Q9H2F5 836 aa16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 RREB1Q92766 1687 aa16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 MFAP3LO75121 409 aa16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 PTGDRQ13258 359 aa16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 UBE4AQ14139 1066 aa16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 FILIP1LQ4L180 1135 aa16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 IRX2Q9BZI1 471 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-237ENST00000585163 SEC31AO94979 1220 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 E2F4Q16254 413 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 TAF3Q5VWG9 929 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 CC2D1AQ6P1N0 951 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 CTR9Q6PD62 1173 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 ZNF384Q8TF68 577 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 CNTNAP5Q8WYK1 1306 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 STRCQ7RTU9 1775 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 WTIPA6NIX2 430 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 TEX35Q5T0J7 233 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 RASGRP2Q7LDG7 609 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 CPLX3Q8WVH0 158 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 UBXN6Q9BZV1 441 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 XDHP47989 1333 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 ITIH6Q6UXX5 1313 aa16.1■□□□□ 0.17
CDK5RAP3-237ENST00000585163 LOC102724428A0A0B4J2F2 783 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 TBC1D8O95759 1140 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 FECHP22830 423 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 SIK1P57059 783 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 CNGA4Q8IV77 575 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 IQUBQ8NA54 791 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 CCDC51Q96ER9 411 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 LZTFL1Q9NQ48 299 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 MYH14Q7Z406 1995 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 WNK3Q9BYP7 1800 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 A0A1B0GUL6 1792 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 LRRC10BA6NIK2 292 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 GYPCP04921 128 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 CASP14P31944 242 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 TRAPPC10P48553 1259 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 ITPK1Q13572 414 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 CAVIN4Q5BKX8 364 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 ANKRD18AQ8IVF6 992 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 SRBD1Q8N5C6 995 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 GOLGA1Q92805 767 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 PARD6BQ9BYG5 372 aa16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
CDK5RAP3-237ENST00000585163 USP17L12C9JPN9 530 aa16.08■□□□□ 0.17
CDK5RAP3-237ENST00000585163 USP17L21D6R901 530 aa16.08■□□□□ 0.17
CDK5RAP3-237ENST00000585163 PDXDC2PQ6P474 469 aa16.08■□□□□ 0.17
CDK5RAP3-237ENST00000585163 STAMQ92783 540 aa16.08■□□□□ 0.17
CDK5RAP3-237ENST00000585163 PYM1Q9BRP8 204 aaKnown RBP16.08■□□□□ 0.17
CDK5RAP3-237ENST00000585163 BSDC1Q9NW68 430 aaPredicted RBP16.08■□□□□ 0.17
CDK5RAP3-237ENST00000585163 CTNND2Q9UQB3 1225 aa16.08■□□□□ 0.17
CDK5RAP3-237ENST00000585163 ORC4O43929 436 aa16.08■□□□□ 0.16
CDK5RAP3-237ENST00000585163 KIF5CO60282 957 aa16.08■□□□□ 0.16
CDK5RAP3-237ENST00000585163 SASH3O75995 380 aa16.08■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CTCFLQ8NI51 663 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-237ENST00000585163 FAM84BQ96KN1 310 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-237ENST00000585163 LIMA1Q9UHB6 759 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-237ENST00000585163 TXLNAP40222 546 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 FXR1P51114 621 aaKnown RBP eCLIP16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 MTRQ99707 1265 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ARFGAP3Q9NP61 516 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 RWDD2AQ9UIY3 292 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 SCN7AQ01118 1682 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 A0A0U1RQJ8 604 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 SCG2P13521 617 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 KRT31Q15323 416 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 SF3B3Q15393 1217 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 JAKMIP3Q5VZ66 844 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 PIK3AP1Q6ZUJ8 805 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ATRIPQ8WXE1 791 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 BLZF1Q9H2G9 400 aa16.07■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CCDC66A2RUB6 948 aa16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 GTPBP6O43824 516 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CYP2C19P33261 490 aa16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 IL17AQ16552 155 aa16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 SRGAP1Q7Z6B7 1085 aa16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ZFP91Q96JP5 570 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 MINPP1Q9UNW1 487 aa16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 ZNF652Q9Y2D9 606 aa16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 NMT2O60551 498 aa16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 CCT6AP40227 531 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-237ENST00000585163 NLRP5P59047 1200 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms