RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 SYNPO2Q9UMS6 1093 aa19.31■□□□□ 0.68
ERBB2-222ENST00000584908 PTPN22Q9Y2R2 807 aa19.31■□□□□ 0.68
ERBB2-222ENST00000584908 TACC3Q9Y6A5 838 aa19.31■□□□□ 0.68
ERBB2-222ENST00000584908 DOCK3Q8IZD9 2030 aa19.31■□□□□ 0.68
ERBB2-222ENST00000584908 A0A0G2JMZ2 1700 aa19.3■□□□□ 0.68
ERBB2-222ENST00000584908 PSMC4P43686 418 aa19.3■□□□□ 0.68
ERBB2-222ENST00000584908 KIAA1755Q5JYT7 1200 aa19.3■□□□□ 0.68
ERBB2-222ENST00000584908 ANKRD13CQ8N6S4 541 aa19.3■□□□□ 0.68
ERBB2-222ENST00000584908 MKL1Q969V6 931 aa19.3■□□□□ 0.68
ERBB2-222ENST00000584908 TRIM47Q96LD4 638 aa19.3■□□□□ 0.68
ERBB2-222ENST00000584908 PCP11498 1178 aaKnown RBP19.29■□□□□ 0.68
ERBB2-222ENST00000584908 PRMT2P55345 433 aa19.29■□□□□ 0.68
ERBB2-222ENST00000584908 POTEEQ6S8J3 1075 aa19.29■□□□□ 0.68
ERBB2-222ENST00000584908 RUFY2Q8WXA3 655 aa19.29■□□□□ 0.68
ERBB2-222ENST00000584908 RPAP3Q9H6T3 665 aaPredicted RBP19.29■□□□□ 0.68
ERBB2-222ENST00000584908 MTMR4Q9NYA4 1195 aa19.29■□□□□ 0.68
ERBB2-222ENST00000584908 HPS5Q9UPZ3 1129 aa19.29■□□□□ 0.68
ERBB2-222ENST00000584908 WDR46O15213 610 aaKnown RBP19.28■□□□□ 0.68
ERBB2-222ENST00000584908 TSPY3P0CV98 308 aa19.28■□□□□ 0.68
ERBB2-222ENST00000584908 TSPY8P0CW00 308 aa19.28■□□□□ 0.68
ERBB2-222ENST00000584908 BMP2KLQ5H9B9 411 aa19.28■□□□□ 0.68
ERBB2-222ENST00000584908 CEP95Q96GE4 821 aa19.28■□□□□ 0.68
ERBB2-222ENST00000584908 NBPF3Q9H094 633 aa19.28■□□□□ 0.68
ERBB2-222ENST00000584908 RBPJLQ9UBG7 517 aa19.28■□□□□ 0.68
ERBB2-222ENST00000584908 CENPFP49454 3210 aa19.28■□□□□ 0.68
ERBB2-222ENST00000584908 NOVP48745 357 aa19.27■□□□□ 0.68
ERBB2-222ENST00000584908 FCGRTP55899 365 aa19.27■□□□□ 0.68
ERBB2-222ENST00000584908 TFAP4Q01664 338 aa19.27■□□□□ 0.68
ERBB2-222ENST00000584908 STAG1Q8WVM7 1258 aa19.27■□□□□ 0.68
ERBB2-222ENST00000584908 GOPCQ9HD26 462 aa19.27■□□□□ 0.68
ERBB2-222ENST00000584908 TXNRD2Q9NNW7 524 aa19.27■□□□□ 0.68
ERBB2-222ENST00000584908 INCENPQ9NQS7 918 aa19.27■□□□□ 0.68
ERBB2-222ENST00000584908 SRRDQ9UH36 339 aa19.27■□□□□ 0.68
ERBB2-222ENST00000584908 MYPNQ86TC9 1320 aa19.27■□□□□ 0.68
ERBB2-222ENST00000584908 SPDYE16A6NNV3 312 aaPredicted RBP19.26■□□□□ 0.67
ERBB2-222ENST00000584908 SGSM2O43147 1006 aa19.26■□□□□ 0.67
ERBB2-222ENST00000584908 TTLL1O95922 423 aa19.26■□□□□ 0.67
ERBB2-222ENST00000584908 HOXD10P28358 340 aa19.26■□□□□ 0.67
ERBB2-222ENST00000584908 NT5C2P49902 561 aa19.26■□□□□ 0.67
ERBB2-222ENST00000584908 FAM47AQ5JRC9 791 aa19.26■□□□□ 0.67
ERBB2-222ENST00000584908 PPP4R3BQ5MIZ7 849 aa19.26■□□□□ 0.67
ERBB2-222ENST00000584908 AKNAD1Q5T1N1 836 aa19.26■□□□□ 0.67
ERBB2-222ENST00000584908 RABGAP1Q9Y3P9 1069 aa19.26■□□□□ 0.67
ERBB2-222ENST00000584908 FMNL1O95466 1100 aaPredicted RBP19.25■□□□□ 0.67
ERBB2-222ENST00000584908 ATP2B2Q01814 1243 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 COG2Q14746 738 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 SKAP1Q86WV1 359 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 GPRC5AQ8NFJ5 357 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 IL17RBQ9NRM6 502 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 HOXC10Q9NYD6 342 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 CLIP2Q9UDT6 1046 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 CTNNA3Q9UI47 895 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 PLXNB2O15031 1838 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 TSPY2A6NKD2 308 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 ZNF213O14771 459 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 CNMDO75829 334 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 HAND2P61296 217 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 ERVK-9P63128 1117 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 ERVK-24P63145 666 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 MFSD6Q6ZSS7 791 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 TBC1D10CQ8IV04 446 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 SPICE1Q8N0Z3 855 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 GMCL1P1Q8NEA9 526 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 RNF41Q9H4P4 317 aaPredicted RBP19.25■□□□□ 0.67
ERBB2-222ENST00000584908 TCP11L1Q9NUJ3 509 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 PPP4R2Q9NY27 417 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 PTCH2Q9Y6C5 1203 aa19.25■□□□□ 0.67
ERBB2-222ENST00000584908 COL11A1P12107 1806 aaPredicted RBP19.24■□□□□ 0.67
ERBB2-222ENST00000584908 F5H6K3 240 aa19.24■□□□□ 0.67
ERBB2-222ENST00000584908 RANBP6O60518 1105 aaKnown RBP19.24■□□□□ 0.67
ERBB2-222ENST00000584908 KLRC3Q07444 240 aa19.24■□□□□ 0.67
ERBB2-222ENST00000584908 Q3C1V9 767 aa19.24■□□□□ 0.67
ERBB2-222ENST00000584908 ARMC5Q96C12 935 aa19.24■□□□□ 0.67
ERBB2-222ENST00000584908 TANGO6Q9C0B7 1094 aa19.24■□□□□ 0.67
ERBB2-222ENST00000584908 ADAMTS5Q9UNA0 930 aa19.24■□□□□ 0.67
ERBB2-222ENST00000584908 TNPO2O14787 897 aaKnown RBP19.23■□□□□ 0.67
ERBB2-222ENST00000584908 NDUFB10O96000 172 aa19.23■□□□□ 0.67
ERBB2-222ENST00000584908 DSG3P32926 999 aa19.23■□□□□ 0.67
ERBB2-222ENST00000584908 IMMTQ16891 758 aaKnown RBP19.23■□□□□ 0.67
ERBB2-222ENST00000584908 MB21D1Q8N884 522 aa19.23■□□□□ 0.67
ERBB2-222ENST00000584908 RBBP6Q7Z6E9 1792 aaKnown RBP19.22■□□□□ 0.67
ERBB2-222ENST00000584908 PEX10O60683 326 aa19.22■□□□□ 0.67
ERBB2-222ENST00000584908 PTH1RQ03431 593 aa19.22■□□□□ 0.67
ERBB2-222ENST00000584908 PRKCZQ05513 592 aa19.22■□□□□ 0.67
ERBB2-222ENST00000584908 IRF5Q13568 498 aa19.22■□□□□ 0.67
ERBB2-222ENST00000584908 COA7Q96BR5 231 aa19.22■□□□□ 0.67
ERBB2-222ENST00000584908 BTBD7Q9P203 1132 aa19.22■□□□□ 0.67
ERBB2-222ENST00000584908 NEDD4P46934 1319 aa19.21■□□□□ 0.67
ERBB2-222ENST00000584908 NMT2O60551 498 aa19.21■□□□□ 0.67
ERBB2-222ENST00000584908 FLOT1O75955 427 aa19.21■□□□□ 0.67
ERBB2-222ENST00000584908 MAPK4P31152 587 aa19.21■□□□□ 0.67
ERBB2-222ENST00000584908 FAM83BQ5T0W9 1011 aa19.21■□□□□ 0.67
ERBB2-222ENST00000584908 MAP4K1Q92918 833 aa19.21■□□□□ 0.67
ERBB2-222ENST00000584908 PAGR1Q9BTK6 254 aa19.21■□□□□ 0.67
ERBB2-222ENST00000584908 TOMM22Q9NS69 142 aa19.21■□□□□ 0.67
ERBB2-222ENST00000584908 GABRQQ9UN88 632 aa19.21■□□□□ 0.67
ERBB2-222ENST00000584908 CCDC85CA6NKD9 419 aa19.2■□□□□ 0.66
ERBB2-222ENST00000584908 ECM2O94769 699 aaPredicted RBP19.2■□□□□ 0.66
ERBB2-222ENST00000584908 CCNA1P78396 465 aa19.2■□□□□ 0.66
ERBB2-222ENST00000584908 RRP12Q5JTH9 1297 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms