RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 LLGL2Q6P1M3 1020 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 MPZL3Q6UWV2 235 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 THAP5Q7Z6K1 395 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 CCDC74AQ96AQ1 378 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 SLC26A8Q96RN1 970 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 ANO2Q9NQ90 1003 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 TPX2Q9ULW0 747 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 USP20Q9Y2K6 914 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 ARHGAP35Q9NRY4 1499 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 TCAF2A6NFQ2 919 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 EREGO14944 169 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 TIAF1O95411 115 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 CLEC16AQ2KHT3 1053 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 TSNAXIP1Q2TAA8 658 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 SGO2Q562F6 1265 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 SULF2Q8IWU5 870 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 LILRA2Q8N149 483 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 NLGN1Q8N2Q7 840 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 PIWIL2Q8TC59 973 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 FAM8A1Q9UBU6 413 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 SEPT3Q9UH03 358 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 NCOA2Q15596 1464 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 DLC1Q96QB1 1528 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 MAP3K5Q99683 1374 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 TGFB1P01137 390 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 TRIP4Q15650 581 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 CYFIP1Q7L576 1253 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 RELL1Q8IUW5 271 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 GALNT11Q8NCW6 608 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 ACSS3Q9H6R3 686 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 PRDM5Q9NQX1 630 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 GPATCH2Q9NW75 528 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 MAPK8IP1Q9UQF2 711 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 TNRQ92752 1358 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 CDC42BPAQ5VT25 1732 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 RBAK-RBAKDNI3L0D1 243 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 LGR5O75473 907 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 F13BP05160 661 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 TCF3P15923 654 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 SERPINB4P48594 390 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 CHRNEQ04844 493 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 GNL2Q13823 731 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 TMEM132EQ6IEE7 984 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 TXNDC11Q6PKC3 985 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 HID1Q8IV36 788 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 ARMC10Q8N2F6 343 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 FBXO15Q8NCQ5 510 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 C2CD4AQ8NCU7 369 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 GLIS3Q8NEA6 775 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 GGNBP2Q9H3C7 697 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 ASXL1Q8IXJ9 1541 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 LRIG2O94898 1065 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 YARSP54577 528 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 FCGRTP55899 365 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 SF3A1Q15459 793 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 AOC3Q16853 763 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 EAPPQ56P03 285 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 EFCAB2Q5VUJ9 269 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 SIAH1Q8IUQ4 282 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 FAM168AQ92567 244 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 NIF3L1Q9GZT8 377 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 ZNF576Q9H609 170 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 THSD7AQ9UPZ6 1657 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 DBX1A6NMT0 343 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 EIF1AYO14602 144 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 CYP2E1P05181 493 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 NFICP08651 508 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 FUT4P22083 530 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 DRC1Q96MC2 740 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 FAM129BQ96TA1 746 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 CCDC39Q9UFE4 941 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 TTF2Q9UNY4 1162 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 OAS3Q9Y6K5 1087 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 MYOM1P52179 1685 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 ANKRD33BA6NCL7 494 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 CLSTN1O94985 981 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 CEACAM5P06731 702 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 ERCC5P28715 1186 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 RPS26P62854 115 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 ZNF211Q13398 564 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 SNX17Q15036 470 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 CIAPIN1Q6FI81 312 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 SLC6A17Q9H1V8 727 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 PCDH18Q9HCL0 1135 aa2.69□□□□□ -1.98
SMCHD1-211ENST00000584897 FAM87AP0C7U9 286 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 CCDC84Q86UT8 332 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 ADGRE2Q9UHX3 823 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 NRAPQ86VF7 1730 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 A2MP01023 1474 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 AFF2P51816 1311 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 SLC43A3Q8NBI5 491 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 PRDM10Q9NQV6 1147 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 NALCNQ8IZF0 1738 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 ABCC5O15440 1437 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 MAPK8P45983 427 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 ETF1P62495 437 aaKnown RBP2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 SLC6A19Q695T7 634 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 VN1R5Q7Z5H4 357 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 ZSWIM9Q86XI8 627 aa2.68□□□□□ -1.98
SMCHD1-211ENST00000584897 KIRREL1Q96J84 757 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms