RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 C19orf81C9J6K1 198 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 RAD21O60216 631 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 CALM1P0DP23 149 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 CALM2P0DP24 149 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 CALM3P0DP25 149 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 ECE1P42892 770 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 APLP1P51693 650 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 USP14P54578 494 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 NOL8Q76FK4 1167 aaKnown RBP21.42■■□□□ 1.02
RFFL-211ENST00000584541 ZNF654Q8IZM8 581 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 ACER1Q8TDN7 264 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 KIAA1683Q9H0B3 1180 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 SENP2Q9HC62 589 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 LIMCH1Q9UPQ0 1083 aa21.42■■□□□ 1.02
RFFL-211ENST00000584541 A0A1W2PRG0 241 aa21.41■■□□□ 1.02
RFFL-211ENST00000584541 TRIM75PA6NK02 468 aa21.41■■□□□ 1.02
RFFL-211ENST00000584541 DDAH1O94760 285 aa21.41■■□□□ 1.02
RFFL-211ENST00000584541 ZNF157P51786 506 aaPredicted RBP21.41■■□□□ 1.02
RFFL-211ENST00000584541 MTMR2Q13614 643 aa21.41■■□□□ 1.02
RFFL-211ENST00000584541 RGMBQ6NW40 437 aa21.41■■□□□ 1.02
RFFL-211ENST00000584541 APOA5Q6Q788 366 aa21.41■■□□□ 1.02
RFFL-211ENST00000584541 GMCL1P1Q8NEA9 526 aa21.41■■□□□ 1.02
RFFL-211ENST00000584541 CXCL11O14625 94 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 ZBTB43O43298 467 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 BACE1P56817 501 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 EVCP57679 992 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 ZYXQ15942 572 aaKnown RBP21.4■■□□□ 1.02
RFFL-211ENST00000584541 USP17L2Q6R6M4 530 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 ZNF274Q96GC6 653 aaPredicted RBP21.4■■□□□ 1.02
RFFL-211ENST00000584541 WNK4Q96J92 1243 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 HHIPL1Q96JK4 782 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 ZSCAN31Q96LW9 406 aaPredicted RBP21.4■■□□□ 1.02
RFFL-211ENST00000584541 LARP6Q9BRS8 491 aaKnown RBP21.4■■□□□ 1.02
RFFL-211ENST00000584541 VCPKMTQ9H867 229 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 CREBZFQ9NS37 354 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 TMOD4Q9NZQ9 345 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 BRPF3Q9ULD4 1205 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 MTMR7Q9Y216 660 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 CEP350Q5VT06 3117 aa21.4■■□□□ 1.02
RFFL-211ENST00000584541 GOLGA8BA8MQT2 603 aa21.39■■□□□ 1.01
RFFL-211ENST00000584541 F5H6K3 240 aa21.39■■□□□ 1.01
RFFL-211ENST00000584541 IRF6O14896 467 aa21.39■■□□□ 1.01
RFFL-211ENST00000584541 ZBTB48P10074 688 aaPredicted RBP21.39■■□□□ 1.01
RFFL-211ENST00000584541 RCAN1P53805 252 aa21.39■■□□□ 1.01
RFFL-211ENST00000584541 KLRC3Q07444 240 aa21.39■■□□□ 1.01
RFFL-211ENST00000584541 SLFN13Q68D06 897 aa21.39■■□□□ 1.01
RFFL-211ENST00000584541 NUP133Q8WUM0 1156 aa21.39■■□□□ 1.01
RFFL-211ENST00000584541 LPAR1Q92633 364 aa21.39■■□□□ 1.01
RFFL-211ENST00000584541 TSHZ2Q9NRE2 1034 aa21.39■■□□□ 1.01
RFFL-211ENST00000584541 MICU3Q86XE3 530 aa21.38■■□□□ 1.01
RFFL-211ENST00000584541 HSCBQ8IWL3 235 aa21.38■■□□□ 1.01
RFFL-211ENST00000584541 CTCFLQ8NI51 663 aaPredicted RBP21.38■■□□□ 1.01
RFFL-211ENST00000584541 DCAF4Q8WV16 495 aa21.38■■□□□ 1.01
RFFL-211ENST00000584541 SNX21Q969T3 373 aa21.38■■□□□ 1.01
RFFL-211ENST00000584541 CCDC102AQ96A19 550 aa21.38■■□□□ 1.01
RFFL-211ENST00000584541 MAP3K14Q99558 947 aa21.38■■□□□ 1.01
RFFL-211ENST00000584541 TPCN1Q9ULQ1 816 aa21.38■■□□□ 1.01
RFFL-211ENST00000584541 KCNH4Q9UQ05 1017 aa21.38■■□□□ 1.01
RFFL-211ENST00000584541 LOC285556D6RIA3 1793 aa21.38■■□□□ 1.01
RFFL-211ENST00000584541 NDUFB10O96000 172 aa21.37■■□□□ 1.01
RFFL-211ENST00000584541 PDIA3P30101 505 aaKnown RBP21.37■■□□□ 1.01
RFFL-211ENST00000584541 KIF5BP33176 963 aa21.37■■□□□ 1.01
RFFL-211ENST00000584541 ANP32AP39687 249 aaKnown RBP21.37■■□□□ 1.01
RFFL-211ENST00000584541 SLC1A4P43007 532 aa21.37■■□□□ 1.01
RFFL-211ENST00000584541 METAP2P50579 478 aaKnown RBP eCLIP21.37■■□□□ 1.01
RFFL-211ENST00000584541 HMGCS2P54868 508 aa21.37■■□□□ 1.01
RFFL-211ENST00000584541 TROAPQ12815 778 aa21.37■■□□□ 1.01
RFFL-211ENST00000584541 SNAPC2Q13487 334 aa21.37■■□□□ 1.01
RFFL-211ENST00000584541 SPRYD7Q5W111 196 aa21.37■■□□□ 1.01
RFFL-211ENST00000584541 MYL10Q9BUA6 226 aa21.37■■□□□ 1.01
RFFL-211ENST00000584541 SLKQ9H2G2 1235 aaPredicted RBP21.37■■□□□ 1.01
RFFL-211ENST00000584541 SH2B1Q9NRF2 756 aaPredicted RBP21.37■■□□□ 1.01
RFFL-211ENST00000584541 ISY1Q9ULR0 285 aaKnown RBP21.37■■□□□ 1.01
RFFL-211ENST00000584541 GOLGA8AA7E2F4 631 aa21.36■■□□□ 1.01
RFFL-211ENST00000584541 CD2BP2O95400 341 aaKnown RBP21.36■■□□□ 1.01
RFFL-211ENST00000584541 PARP1P09874 1014 aaKnown RBP21.36■■□□□ 1.01
RFFL-211ENST00000584541 PDHBP11177 359 aa21.36■■□□□ 1.01
RFFL-211ENST00000584541 GTF2A2P52657 109 aa21.36■■□□□ 1.01
RFFL-211ENST00000584541 PPP2R5BQ15173 497 aa21.36■■□□□ 1.01
RFFL-211ENST00000584541 CCDC96Q2M329 555 aa21.36■■□□□ 1.01
RFFL-211ENST00000584541 SH3D19Q5HYK7 790 aa21.36■■□□□ 1.01
RFFL-211ENST00000584541 PAXIP1Q6ZW49 1069 aaPredicted RBP21.36■■□□□ 1.01
RFFL-211ENST00000584541 RASAL3Q86YV0 1011 aa21.36■■□□□ 1.01
RFFL-211ENST00000584541 CHMP4CQ96CF2 233 aa21.36■■□□□ 1.01
RFFL-211ENST00000584541 GMCL1Q96IK5 515 aa21.36■■□□□ 1.01
RFFL-211ENST00000584541 C12orf42Q96LP6 360 aa21.36■■□□□ 1.01
RFFL-211ENST00000584541 A0A0G2JLL6 359 aaPredicted RBP21.35■■□□□ 1.01
RFFL-211ENST00000584541 CCDC196A0A1B0GTZ2 297 aa21.35■■□□□ 1.01
RFFL-211ENST00000584541 WDR46O15213 610 aaKnown RBP21.35■■□□□ 1.01
RFFL-211ENST00000584541 RXRAP19793 462 aa21.35■■□□□ 1.01
RFFL-211ENST00000584541 GJA5P36382 358 aa21.35■■□□□ 1.01
RFFL-211ENST00000584541 STK3Q13188 491 aa21.35■■□□□ 1.01
RFFL-211ENST00000584541 GRM4Q14833 912 aa21.35■■□□□ 1.01
RFFL-211ENST00000584541 RTN1Q16799 776 aa21.35■■□□□ 1.01
RFFL-211ENST00000584541 ASPRV1Q53RT3 343 aa21.35■■□□□ 1.01
RFFL-211ENST00000584541 GPATCH4Q5T3I0 446 aaKnown RBP21.35■■□□□ 1.01
RFFL-211ENST00000584541 FASTKD5Q7L8L6 764 aaKnown RBP21.35■■□□□ 1.01
RFFL-211ENST00000584541 PRRT2Q7Z6L0 340 aaPredicted RBP21.35■■□□□ 1.01
RFFL-211ENST00000584541 RAB11FIP4Q86YS3 637 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms