RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 VPS13AQ96RL7 3174 aa7.82□□□□□ -1.16
CTC1-212ENST00000584439 PI4K2BG5E9Z4 385 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 DNM1LO00429 736 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 APAF1O14727 1248 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 CNGA1P29973 690 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 HMGCS2P54868 508 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 TLE2Q04725 743 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 GCKRQ14397 625 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 SNX17Q15036 470 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 DIXDC1Q155Q3 683 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 TSR1Q2NL82 804 aaKnown RBP7.81□□□□□ -1.16
CTC1-212ENST00000584439 EPHA10Q5JZY3 1008 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 MORN1Q5T089 497 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 KSR2Q6VAB6 950 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 C16orf59Q7L2K0 433 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 LPAR1Q92633 364 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 MS4A3Q96HJ5 214 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 UCN2Q96RP3 112 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 PICK1Q9NRD5 415 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 MORF4L1Q9UBU8 362 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 DDX20Q9UHI6 824 aaKnown RBP7.81□□□□□ -1.16
CTC1-212ENST00000584439 PLXNA3P51805 1871 aa7.81□□□□□ -1.16
CTC1-212ENST00000584439 DDTLA6NHG4 134 aaPredicted RBP7.8□□□□□ -1.16
CTC1-212ENST00000584439 RFXAPO00287 272 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 ADCYAP1R1P41586 468 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 GCLCP48506 637 aaPredicted RBP7.8□□□□□ -1.16
CTC1-212ENST00000584439 SPP2Q13103 211 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 RRP1BQ14684 758 aaKnown RBP7.8□□□□□ -1.16
CTC1-212ENST00000584439 KRT40Q6A162 431 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 CCDC129Q6ZRS4 1044 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 FBXO33Q7Z6M2 555 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 METTL3Q86U44 580 aaKnown RBP7.8□□□□□ -1.16
CTC1-212ENST00000584439 C8orf58Q8NAV2 365 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 NKX2-4Q9H2Z4 354 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 ALG2Q9H553 416 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 RBPJLQ9UBG7 517 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 PNMA3Q9UL41 463 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 YBX2Q9Y2T7 364 aaKnown RBP7.8□□□□□ -1.16
CTC1-212ENST00000584439 CHMP3Q9Y3E7 222 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 MCM3APO60318 1980 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 CACNA1BQ00975 2339 aa7.8□□□□□ -1.16
CTC1-212ENST00000584439 COL11A1P12107 1806 aaPredicted RBP7.8□□□□□ -1.16
CTC1-212ENST00000584439 KMT2BQ9UMN6 2715 aaPredicted RBP7.8□□□□□ -1.16
CTC1-212ENST00000584439 ZFHX2Q9C0A1 2572 aaPredicted RBP7.79□□□□□ -1.16
CTC1-212ENST00000584439 KMT2EQ8IZD2 1858 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 DMDP11532 3685 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 CYP2C19P33261 490 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 FPGSQ05932 587 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 IFIT5Q13325 482 aaKnown RBP7.79□□□□□ -1.16
CTC1-212ENST00000584439 QPCTQ16769 361 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 HHIPL2Q6UWX4 724 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 LDHAL6AQ6ZMR3 332 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 GPR142Q7Z601 462 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 TSPYL6Q8N831 410 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 NPLOC4Q8TAT6 608 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 SPIRE2Q8WWL2 714 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 SOCS4Q8WXH5 440 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 UIMC1Q96RL1 719 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 MRIQ9BWK5 157 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 IFT57Q9NWB7 429 aa7.79□□□□□ -1.16
CTC1-212ENST00000584439 MYO5AQ9Y4I1 1855 aaKnown RBP7.79□□□□□ -1.16
CTC1-212ENST00000584439 CACNA1GO43497 2377 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 DMXL1Q9Y485 3027 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 C2orf72A6NCS6 295 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 PRR33A8MZF0 331 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 KIAA0355O15063 1070 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 ERC2O15083 957 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 DDX58O95786 925 aaKnown RBP7.78□□□□□ -1.16
CTC1-212ENST00000584439 CLTBP09497 229 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 ACRP10323 421 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 MYOGP15173 224 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 RGS2P41220 211 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 RGS3P49796 1198 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 MAP3K10Q02779 954 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 UBE4AQ14139 1066 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 TMEM240Q5SV17 173 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 RASIP1Q5U651 963 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 ASTLQ6HA08 431 aaPredicted RBP7.78□□□□□ -1.16
CTC1-212ENST00000584439 PHLDB3Q6NSJ2 640 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 LMBR1LQ6UX01 489 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 APBA2Q99767 749 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 DDX4Q9NQI0 724 aaKnown RBP7.78□□□□□ -1.16
CTC1-212ENST00000584439 CNNM1Q9NRU3 951 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 USP40Q9NVE5 1235 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 LRRFIP2Q9Y608 721 aaKnown RBP7.78□□□□□ -1.16
CTC1-212ENST00000584439 PARP14Q460N5 1801 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 FOCADQ5VW36 1801 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 ZNF236Q9UL36 1845 aa7.78□□□□□ -1.16
CTC1-212ENST00000584439 RFX7Q2KHR2 1363 aa7.77□□□□□ -1.17
CTC1-212ENST00000584439 SPTLC1O15269 473 aa7.77□□□□□ -1.17
CTC1-212ENST00000584439 ATMINO43313 823 aaPredicted RBP7.77□□□□□ -1.17
CTC1-212ENST00000584439 CTNND1O60716 968 aaKnown RBP7.77□□□□□ -1.17
CTC1-212ENST00000584439 IGHA2P01877 340 aa7.77□□□□□ -1.17
CTC1-212ENST00000584439 CYBAP13498 195 aa7.77□□□□□ -1.17
CTC1-212ENST00000584439 RAG1P15918 1043 aa7.77□□□□□ -1.17
CTC1-212ENST00000584439 NCLP19338 710 aaKnown RBP7.77□□□□□ -1.17
CTC1-212ENST00000584439 HERVK_113P62684 666 aa7.77□□□□□ -1.17
CTC1-212ENST00000584439 GNAI1P63096 354 aa7.77□□□□□ -1.17
CTC1-212ENST00000584439 NEXNQ0ZGT2 675 aa7.77□□□□□ -1.17
CTC1-212ENST00000584439 SHROOM1Q2M3G4 852 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms