RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, human

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-223	ENST00000584328	GGT7	Q9UJ14	662 aa		7.81	□□□□□ -1.16
NF1-223	ENST00000584328	ADAM30	Q9UKF2	790 aa		7.81	□□□□□ -1.16
NF1-223	ENST00000584328	MAPK8IP1	Q9UQF2	711 aa		7.81	□□□□□ -1.16
NF1-223	ENST00000584328	CCNB3	Q8WWL7	1395 aa		7.81	□□□□□ -1.16
NF1-223	ENST00000584328	MBD5	Q9P267	1494 aa		7.81	□□□□□ -1.16
NF1-223	ENST00000584328	SAMD9L	Q8IVG5	1584 aa		7.8	□□□□□ -1.16
NF1-223	ENST00000584328	POGZ	Q7Z3K3	1410 aa		7.8	□□□□□ -1.16
NF1-223	ENST00000584328	PLCG1	P19174	1290 aa		7.8	□□□□□ -1.16
NF1-223	ENST00000584328	HS2ST1	Q7LGA3	356 aa		7.8	□□□□□ -1.16
NF1-223	ENST00000584328	WFDC3	Q8IUB2	231 aa		7.8	□□□□□ -1.16
NF1-223	ENST00000584328	MCAT	Q8IVS2	390 aa	Known RBP	7.8	□□□□□ -1.16
NF1-223	ENST00000584328	ACSF2	Q96CM8	615 aa	Predicted RBP	7.8	□□□□□ -1.16
NF1-223	ENST00000584328	TNKS2	Q9H2K2	1166 aa		7.8	□□□□□ -1.16
NF1-223	ENST00000584328	TCOF1	Q13428	1488 aa	Known RBP	7.8	□□□□□ -1.16
NF1-223	ENST00000584328	KDM5C	P41229	1560 aa		7.8	□□□□□ -1.16
NF1-223	ENST00000584328	CNTNAP4	Q9C0A0	1308 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	ARHGAP5	Q13017	1502 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	ZMYM4	Q5VZL5	1548 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	KDM6B	O15054	1643 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	CD8B	P10966	210 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	GART	P22102	1010 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	CD96	P40200	585 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	NKPD1	Q17RQ9	610 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	SFRP5	Q5T4F7	317 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	EFCAB2	Q5VUJ9	269 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	SPACA3	Q8IXA5	215 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	TMEM87A	Q8NBN3	555 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	SNX11	Q9Y5W9	270 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	ADGRL1	O94910	1474 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	ITSN2	Q9NZM3	1697 aa		7.79	□□□□□ -1.16
NF1-223	ENST00000584328	TAL1	P17542	331 aa	Predicted RBP	7.78	□□□□□ -1.16
NF1-223	ENST00000584328	EIF4A3	P38919	411 aa	Known RBP	7.78	□□□□□ -1.16
NF1-223	ENST00000584328	MPP2	Q14168	576 aa		7.78	□□□□□ -1.16
NF1-223	ENST00000584328	PLCL1	Q15111	1095 aa		7.78	□□□□□ -1.16
NF1-223	ENST00000584328	ZNF746	Q6NUN9	644 aa	Predicted RBP	7.78	□□□□□ -1.16
NF1-223	ENST00000584328	FBXL19	Q6PCT2	694 aa		7.78	□□□□□ -1.16
NF1-223	ENST00000584328	FAM196A	Q6ZSG2	479 aa		7.78	□□□□□ -1.16
NF1-223	ENST00000584328	FBXO27	Q8NI29	283 aa		7.78	□□□□□ -1.16
NF1-223	ENST00000584328	DENND4B	O75064	1496 aa	Predicted RBP	7.78	□□□□□ -1.16
NF1-223	ENST00000584328	PLEKHH2	Q8IVE3	1493 aa		7.78	□□□□□ -1.16
NF1-223	ENST00000584328	FGD6	Q6ZV73	1430 aa		7.78	□□□□□ -1.16
NF1-223	ENST00000584328	SCAPER	Q9BY12	1400 aa		7.78	□□□□□ -1.16
NF1-223	ENST00000584328	CAMSAP2	Q08AD1	1489 aa		7.77	□□□□□ -1.17
NF1-223	ENST00000584328	ZNF518A	Q6AHZ1	1483 aa		7.77	□□□□□ -1.17
NF1-223	ENST00000584328	RBM47	A0AV96	593 aa	Known RBP	7.77	□□□□□ -1.17
NF1-223	ENST00000584328	PRR33	A8MZF0	331 aa		7.77	□□□□□ -1.17
NF1-223	ENST00000584328	FAM155A	B1AL88	458 aa	Predicted RBP	7.77	□□□□□ -1.17
NF1-223	ENST00000584328	GRIN3B	O60391	1043 aa		7.77	□□□□□ -1.17
NF1-223	ENST00000584328	LDLRAD1	Q5T700	205 aa		7.77	□□□□□ -1.17
NF1-223	ENST00000584328	CDH24	Q86UP0	819 aa		7.77	□□□□□ -1.17
NF1-223	ENST00000584328	FAM13C	Q8NE31	585 aa		7.77	□□□□□ -1.17
NF1-223	ENST00000584328	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	7.77	□□□□□ -1.17
NF1-223	ENST00000584328	RICTOR	Q6R327	1708 aa		7.77	□□□□□ -1.17
NF1-223	ENST00000584328	SYCP2	Q9BX26	1530 aa		7.77	□□□□□ -1.17
NF1-223	ENST00000584328	TRAPPC8	Q9Y2L5	1435 aa		7.77	□□□□□ -1.17
NF1-223	ENST00000584328	MAGI2	Q86UL8	1455 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	MLH3	Q9UHC1	1453 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	UPK3BL1	B0FP48	263 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	UPK3BL2	E5RIL1	263 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	TLR3	O15455	904 aa	Known RBP	7.76	□□□□□ -1.17
NF1-223	ENST00000584328	CBX7	O95931	251 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	CYP7A1	P22680	504 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	CLCN7	P51798	805 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	TMEM201	Q5SNT2	666 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	C22orf34	Q6ZV56	151 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	REC114	Q7Z4M0	266 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	MFSD4A	Q8N468	514 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	ASB11	Q8WXH4	323 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	BACH2	Q9BYV9	841 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	KCNQ5	Q9NR82	932 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	REV1	Q9UBZ9	1251 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	CFDP1	Q9UEE9	299 aa	Predicted RBP	7.76	□□□□□ -1.17
NF1-223	ENST00000584328	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.76	□□□□□ -1.17
NF1-223	ENST00000584328	TSPOAP1	O95153	1857 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	ZNF644	Q9H582	1327 aa	Predicted RBP	7.76	□□□□□ -1.17
NF1-223	ENST00000584328	PRR36	Q9H6K5	1346 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	ARHGEF5	Q12774	1597 aa		7.76	□□□□□ -1.17
NF1-223	ENST00000584328	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
NF1-223	ENST00000584328	HTR3B	O95264	441 aa		7.75	□□□□□ -1.17
NF1-223	ENST00000584328	ZNF865	P0CJ78	1059 aa	Predicted RBP	7.75	□□□□□ -1.17
NF1-223	ENST00000584328	FUT4	P22083	530 aa		7.75	□□□□□ -1.17
NF1-223	ENST00000584328	YARS	P54577	528 aa	Known RBP	7.75	□□□□□ -1.17
NF1-223	ENST00000584328	CWF19L2	Q2TBE0	894 aa	Known RBP	7.75	□□□□□ -1.17
NF1-223	ENST00000584328	CBLL1	Q75N03	491 aa		7.75	□□□□□ -1.17
NF1-223	ENST00000584328	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.75	□□□□□ -1.17
NF1-223	ENST00000584328	CAPN6	Q9Y6Q1	641 aa		7.75	□□□□□ -1.17
NF1-223	ENST00000584328	RRBP1	Q9P2E9	1410 aa	Known RBP	7.75	□□□□□ -1.17
NF1-223	ENST00000584328	ROBO2	Q9HCK4	1378 aa		7.74	□□□□□ -1.17
NF1-223	ENST00000584328	GREM1	O60565	184 aa		7.74	□□□□□ -1.17
NF1-223	ENST00000584328	RAPGEF3	O95398	923 aa		7.74	□□□□□ -1.17
NF1-223	ENST00000584328	ETV3	P41162	512 aa		7.74	□□□□□ -1.17
NF1-223	ENST00000584328	ZNF792	Q3KQV3	632 aa		7.74	□□□□□ -1.17
NF1-223	ENST00000584328	ANGEL2	Q5VTE6	544 aa	Known RBP	7.74	□□□□□ -1.17
NF1-223	ENST00000584328	CDKAL1	Q5VV42	579 aa		7.74	□□□□□ -1.17
NF1-223	ENST00000584328	COX4I2	Q96KJ9	171 aa		7.74	□□□□□ -1.17
NF1-223	ENST00000584328	HSPA12B	Q96MM6	686 aa		7.74	□□□□□ -1.17
NF1-223	ENST00000584328	KLHL3	Q9UH77	587 aa		7.74	□□□□□ -1.17
NF1-223	ENST00000584328	ADAMTS1	Q9UHI8	967 aa		7.74	□□□□□ -1.17
NF1-223	ENST00000584328	INO80	Q9ULG1	1556 aa	Predicted RBP	7.74	□□□□□ -1.17
NF1-223	ENST00000584328	PITPNM2	Q9BZ72	1349 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms