RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 MKNK2Q9HBH9 465 aa16.31■□□□□ 0.2
CDK5RAP3-233ENST00000584186 DOCK3Q8IZD9 2030 aa16.31■□□□□ 0.2
CDK5RAP3-233ENST00000584186 MYH8P13535 1937 aa16.3■□□□□ 0.2
CDK5RAP3-233ENST00000584186 SPDYE16A6NNV3 312 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-233ENST00000584186 TFRCP02786 760 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-233ENST00000584186 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-233ENST00000584186 TRIM32Q13049 653 aa16.3■□□□□ 0.2
CDK5RAP3-233ENST00000584186 SBK1Q52WX2 424 aa16.3■□□□□ 0.2
CDK5RAP3-233ENST00000584186 KIAA1755Q5JYT7 1200 aa16.3■□□□□ 0.2
CDK5RAP3-233ENST00000584186 GIMAP6Q6P9H5 292 aa16.3■□□□□ 0.2
CDK5RAP3-233ENST00000584186 BTBD7Q9P203 1132 aa16.3■□□□□ 0.2
CDK5RAP3-233ENST00000584186 TMX2Q9Y320 296 aa16.3■□□□□ 0.2
CDK5RAP3-233ENST00000584186 SGPL1O95470 568 aa16.29■□□□□ 0.2
CDK5RAP3-233ENST00000584186 COG2Q14746 738 aa16.29■□□□□ 0.2
CDK5RAP3-233ENST00000584186 B4GALNT3Q6L9W6 998 aa16.29■□□□□ 0.2
CDK5RAP3-233ENST00000584186 TRIB2Q92519 343 aa16.29■□□□□ 0.2
CDK5RAP3-233ENST00000584186 LPAR1Q92633 364 aa16.29■□□□□ 0.2
CDK5RAP3-233ENST00000584186 VCPKMTQ9H867 229 aa16.29■□□□□ 0.2
CDK5RAP3-233ENST00000584186 KANSL2Q9H9L4 492 aa16.29■□□□□ 0.2
CDK5RAP3-233ENST00000584186 EPB41L4AQ9HCS5 686 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-233ENST00000584186 HOXC10Q9NYD6 342 aa16.29■□□□□ 0.2
CDK5RAP3-233ENST00000584186 SALL3Q9BXA9 1300 aa16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 PATL2C9JE40 543 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 FLOT1O75955 427 aa16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 ZKSCAN1P17029 563 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 RGS2P41220 211 aa16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 LBX2Q6XYB7 198 aa16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 IFNL3Q8IZI9 196 aa16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 EXOC6Q8TAG9 804 aa16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 NACAP1Q9BZK3 213 aa16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 LNPKQ9C0E8 428 aa16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 RWDD1Q9H446 243 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 PAK6Q9NQU5 681 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-233ENST00000584186 PRDM1O75626 825 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 FARP2O94887 1054 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 XRCC5P13010 732 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 RASA1P20936 1047 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 PDE1AP54750 535 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 AAMPQ13685 434 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 PLS1Q14651 629 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 ZMYM1Q5SVZ6 1142 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 MORN1Q5T089 497 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 DPF3Q92784 378 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 EVI5LQ96CN4 794 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 NAPBQ9H115 298 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 GOPCQ9HD26 462 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 HMX1Q9NP08 348 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 IVNS1ABPQ9Y6Y0 642 aa16.27■□□□□ 0.2
CDK5RAP3-233ENST00000584186 PLXNB2O15031 1838 aa16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 RPTORQ8N122 1335 aa16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 CCL14Q16627 93 aa16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 CCDC129Q6ZRS4 1044 aa16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 ZNF444Q8N0Y2 327 aaPredicted RBP16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 USP6NLQ92738 828 aa16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 APBA2Q99767 749 aa16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 ZNF287Q9HBT7 754 aa16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 STAP2Q9UGK3 403 aa16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 ROBO3Q96MS0 1386 aa16.26■□□□□ 0.19
CDK5RAP3-233ENST00000584186 WDR46O15213 610 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-233ENST00000584186 PTPREP23469 700 aa16.25■□□□□ 0.19
CDK5RAP3-233ENST00000584186 DSG3P32926 999 aa16.25■□□□□ 0.19
CDK5RAP3-233ENST00000584186 MAP2K5Q13163 448 aa16.25■□□□□ 0.19
CDK5RAP3-233ENST00000584186 TRMT44Q8IYL2 757 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-233ENST00000584186 ATG4CQ96DT6 458 aa16.25■□□□□ 0.19
CDK5RAP3-233ENST00000584186 MOV10L1Q9BXT6 1211 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-233ENST00000584186 SPATC1LQ9H0A9 340 aa16.25■□□□□ 0.19
CDK5RAP3-233ENST00000584186 SUPT16HQ9Y5B9 1047 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-233ENST00000584186 SLC15A5A6NIM6 579 aa16.24■□□□□ 0.19
CDK5RAP3-233ENST00000584186 TRIM6-TRIM34B2RNG4 842 aa16.24■□□□□ 0.19
CDK5RAP3-233ENST00000584186 IGHDP01880 384 aa16.24■□□□□ 0.19
CDK5RAP3-233ENST00000584186 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-233ENST00000584186 FAM83BQ5T0W9 1011 aa16.24■□□□□ 0.19
CDK5RAP3-233ENST00000584186 UBE2Q1Q7Z7E8 422 aa16.24■□□□□ 0.19
CDK5RAP3-233ENST00000584186 HTATIP2Q9BUP3 242 aa16.24■□□□□ 0.19
CDK5RAP3-233ENST00000584186 FBXO28Q9NVF7 368 aa16.24■□□□□ 0.19
CDK5RAP3-233ENST00000584186 CLIP2Q9UDT6 1046 aa16.24■□□□□ 0.19
CDK5RAP3-233ENST00000584186 ERCC3P19447 782 aa16.23■□□□□ 0.19
CDK5RAP3-233ENST00000584186 PDE4BQ07343 736 aa16.23■□□□□ 0.19
CDK5RAP3-233ENST00000584186 PPARAQ07869 468 aa16.23■□□□□ 0.19
CDK5RAP3-233ENST00000584186 CACNB2Q08289 660 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-233ENST00000584186 MAP3K21Q5TCX8 1036 aa16.23■□□□□ 0.19
CDK5RAP3-233ENST00000584186 NCAPG2Q86XI2 1143 aa16.23■□□□□ 0.19
CDK5RAP3-233ENST00000584186 MB21D1Q8N884 522 aa16.23■□□□□ 0.19
CDK5RAP3-233ENST00000584186 NUP88Q99567 741 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-233ENST00000584186 CRISPLD2Q9H0B8 497 aa16.23■□□□□ 0.19
CDK5RAP3-233ENST00000584186 H0YGN5 161 aa16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 TSPY3P0CV98 308 aa16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 TSPY8P0CW00 308 aa16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 GRB14Q14449 540 aa16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 FAM47AQ5JRC9 791 aa16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 DPP9Q86TI2 863 aa16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 CHD1LQ86WJ1 897 aa16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 SMC5Q8IY18 1101 aa16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 DIS3LQ8TF46 1054 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 RILPL2Q969X0 211 aa16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 PAWRQ96IZ0 340 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-233ENST00000584186 FLRT1Q9NZU1 646 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms