RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 RTCBQ9Y3I0 505 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-232ENST00000584168 U3KPZ7 1027 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP3-232ENST00000584168 SMAPO00193 183 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 GCLCP48506 637 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 ZNF165P49910 485 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 PPP2R3AQ06190 1150 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 MTX1Q13505 466 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 RUFY3Q7L099 469 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 ARMC9Q7Z3E5 817 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 SDCCAG8Q86SQ7 713 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 ZNF34Q8IZ26 560 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 L1RE1Q9UN81 338 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 TNS1Q9HBL0 1735 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 DTNBO60941 627 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 RNF40O75150 1001 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 ERLIN1O75477 346 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 KCNJ6P48051 423 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 GJA8P48165 433 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 E2F5Q15329 346 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CCDC40Q4G0X9 1142 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 MICALCLQ6ZW33 695 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CNTROBQ8N137 903 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 HOOK2Q96ED9 719 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 RBM41Q96IZ5 413 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 NEUROD6Q96NK8 337 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 LSG1Q9H089 658 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CNTNAP4Q9C0A0 1308 aa13.37□□□□□ -0.27
CDK5RAP3-232ENST00000584168 ERICH2A1L162 156 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 WTIPA6NIX2 430 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CHGBP05060 677 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CPA1P15085 419 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 HMGB2P26583 209 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 MPP3Q13368 585 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 TXNRD1Q16881 649 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 INF2Q27J81 1249 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 ERFEQ4G0M1 354 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 SLC27A3Q5K4L6 730 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 TPCN1Q9ULQ1 816 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 RNF8O76064 485 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 PCCAP05165 728 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 PDHBP11177 359 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 ARHGAP25P42331 645 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 USP5P45974 858 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 UNC45AQ9H3U1 944 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 DNAAF2Q9NVR5 837 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 ANKIB1Q9P2G1 1089 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 TAF1LQ8IZX4 1826 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 RGPD3A6NKT7 1758 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 RGPD4Q7Z3J3 1758 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 PLSCR1O15162 318 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 ZPR1O75312 459 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 F13A1P00488 732 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 IFIT2P09913 472 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 SLC8A1P32418 973 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 RFC4P35249 363 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CAMK4Q16566 473 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CCDC57Q2TAC2 916 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 RABL6Q3YEC7 729 aaPredicted RBP13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 TRIM65Q6PJ69 517 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 TTLL11Q8NHH1 800 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 MIPOL1Q8TD10 442 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 BCAS4Q8TDM0 211 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 PAPOLBQ9NRJ5 636 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CEP126Q9P2H0 1117 aa13.36□□□□□ -0.27
CDK5RAP3-232ENST00000584168 ERVV-1B6SEH8 477 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 GOLGA6L19H0YKK7 550 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 RPS6KA4O75676 772 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 SMNDC1O75940 238 aaKnown RBP eCLIP13.35□□□□□ -0.272e-22■□□□□ 9.5
CDK5RAP3-232ENST00000584168 ITGA6P23229 1130 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CASP8Q14790 479 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 RC3H1Q5TC82 1133 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CLASRPQ8N2M8 674 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 BOLA2Q9H3K6 86 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 NUP188Q5SRE5 1749 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 MEFVO15553 781 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 LARGE1O95461 756 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 FERP16591 822 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 IRAK1P51617 712 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 B4GALNT4Q76KP1 1039 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 BZW1Q7L1Q6 419 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 MTRQ99707 1265 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 SPATA7Q9P0W8 599 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 MAPK8IP1Q9UQF2 711 aa13.35□□□□□ -0.27
CDK5RAP3-232ENST00000584168 LRRC10BA6NIK2 292 aa13.34□□□□□ -0.27
CDK5RAP3-232ENST00000584168 FANCGO15287 622 aa13.34□□□□□ -0.27
CDK5RAP3-232ENST00000584168 EN1Q05925 392 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-232ENST00000584168 ATG9AQ7Z3C6 839 aa13.34□□□□□ -0.27
CDK5RAP3-232ENST00000584168 FAM228AQ86W67 206 aa13.34□□□□□ -0.27
CDK5RAP3-232ENST00000584168 PARP9Q8IXQ6 854 aa13.34□□□□□ -0.27
CDK5RAP3-232ENST00000584168 TRIM58Q8NG06 486 aa13.34□□□□□ -0.27
CDK5RAP3-232ENST00000584168 GORASP1Q9BQQ3 440 aa13.34□□□□□ -0.27
CDK5RAP3-232ENST00000584168 DBNDD2Q9BQY9 259 aa13.34□□□□□ -0.27
CDK5RAP3-232ENST00000584168 NAT10Q9H0A0 1025 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-232ENST00000584168 SLC40A1Q9NP59 571 aa13.34□□□□□ -0.27
CDK5RAP3-232ENST00000584168 CORO1CQ9ULV4 474 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms