RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 TMEM47Q9BQJ4 181 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 PICK1Q9NRD5 415 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 PNMA2Q9UL42 364 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 STK36Q9NRP7 1315 aa10.73□□□□□ -0.69
CASC3-209ENST00000583902 GOLGA8AA7E2F4 631 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 POTECB2RU33 542 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 hCG_1984214I3L0E3 225 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 PLA2G6O60733 806 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 PARP1P09874 1014 aaKnown RBP10.72□□□□□ -0.69
CASC3-209ENST00000583902 XBP1P17861 261 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 NUBP1P53384 320 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 SCRN1Q12765 414 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 GRM4Q14833 912 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 SCYL3Q8IZE3 742 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 STK11IPQ8N1F8 1099 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 ZNF713Q8N859 430 aaPredicted RBP10.72□□□□□ -0.69
CASC3-209ENST00000583902 SMARCC2Q8TAQ2 1214 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 RBM46Q8TBY0 533 aaKnown RBP10.72□□□□□ -0.69
CASC3-209ENST00000583902 DCAF4Q8WV16 495 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 KLRG1Q96E93 195 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 WDR18Q9BV38 432 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.72□□□□□ -0.69
CASC3-209ENST00000583902 RNF26Q9BY78 433 aaPredicted RBP10.72□□□□□ -0.69
CASC3-209ENST00000583902 LRRC2Q9BYS8 371 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 GOPCQ9HD26 462 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 BRPF3Q9ULD4 1205 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 ZBTB21Q9ULJ3 1066 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 HPS5Q9UPZ3 1129 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 MYH6P13533 1939 aa10.72□□□□□ -0.69
CASC3-209ENST00000583902 USP17L5A8MUK1 530 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 C19orf81C9J6K1 198 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 GH2P01242 217 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 SNHG28P0DPA3 235 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 MAP3K9P80192 1104 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 AKAP17AQ02040 695 aaKnown RBP10.71□□□□□ -0.69
CASC3-209ENST00000583902 SLC4A8Q2Y0W8 1093 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 NBPF12Q5TAG4 269 aaPredicted RBP10.71□□□□□ -0.69
CASC3-209ENST00000583902 MICU3Q86XE3 530 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 CCDC83Q8IWF9 413 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 FAM184AQ8NB25 1140 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 GMCL1Q96IK5 515 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 ZKSCAN3Q9BRR0 538 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 CHMP5Q9NZZ3 219 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 NAP1L2Q9ULW6 460 aaPredicted RBP10.71□□□□□ -0.69
CASC3-209ENST00000583902 TMX2Q9Y320 296 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 ATP6V1DQ9Y5K8 247 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 CSADQ9Y600 493 aa10.71□□□□□ -0.69
CASC3-209ENST00000583902 PALM3A6NDB9 673 aaPredicted RBP10.7□□□□□ -0.7
CASC3-209ENST00000583902 SMIM22K7EJ46 135 aa10.7□□□□□ -0.7
CASC3-209ENST00000583902 PRPF3O43395 683 aaKnown RBP10.7□□□□□ -0.7
CASC3-209ENST00000583902 DEXIO95424 95 aa10.7□□□□□ -0.7
CASC3-209ENST00000583902 FDX1P10109 184 aa10.7□□□□□ -0.7
CASC3-209ENST00000583902 EEF2P13639 858 aaKnown RBP10.7□□□□□ -0.7
CASC3-209ENST00000583902 SSRP1Q08945 709 aaKnown RBP10.7□□□□□ -0.7
CASC3-209ENST00000583902 RAB3GAP1Q15042 981 aa10.7□□□□□ -0.7
CASC3-209ENST00000583902 EAPPQ56P03 285 aaPredicted RBP10.7□□□□□ -0.7
CASC3-209ENST00000583902 NOL8Q76FK4 1167 aaKnown RBP10.7□□□□□ -0.7
CASC3-209ENST00000583902 MIGA2Q7L4E1 593 aa10.7□□□□□ -0.7
CASC3-209ENST00000583902 ANKRD13AQ8IZ07 590 aa10.7□□□□□ -0.7
CASC3-209ENST00000583902 NSUN7Q8NE18 718 aaKnown RBP10.7□□□□□ -0.7
CASC3-209ENST00000583902 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.7□□□□□ -0.74e-12■□□□□ 8.9
CASC3-209ENST00000583902 NUP133Q8WUM0 1156 aa10.7□□□□□ -0.7
CASC3-209ENST00000583902 SPZ1Q9BXG8 430 aa10.7□□□□□ -0.7
CASC3-209ENST00000583902 CLIP2Q9UDT6 1046 aa10.7□□□□□ -0.7
CASC3-209ENST00000583902 ASTN2O75129 1339 aaPredicted RBP10.69□□□□□ -0.7
CASC3-209ENST00000583902 WDR33Q9C0J8 1336 aaKnown RBP10.69□□□□□ -0.7
CASC3-209ENST00000583902 NMT2O60551 498 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 FMNL1O95466 1100 aaPredicted RBP10.69□□□□□ -0.7
CASC3-209ENST00000583902 PDHBP11177 359 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 GUCY1A2P33402 732 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 DDIT3P35638 169 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 SEPT2Q15019 361 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 NTRK3Q16288 839 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 TMTC3Q6ZXV5 915 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 CCDC12Q8WUD4 166 aaPredicted RBP10.69□□□□□ -0.7
CASC3-209ENST00000583902 CDCA5Q96FF9 252 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 WRNIP1Q96S55 665 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 KIAA1683Q9H0B3 1180 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 GLT8D2Q9H1C3 349 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 RRAGCQ9HB90 399 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 SH3GLB2Q9NR46 395 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 TRPM7Q96QT4 1865 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 PAPPA2Q9BXP8 1791 aa10.69□□□□□ -0.7
CASC3-209ENST00000583902 PTPDC1A2A3K4 754 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 USP17L10C9JJH3 530 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 USP2O75604 605 aaPredicted RBP10.68□□□□□ -0.7
CASC3-209ENST00000583902 LARGE1O95461 756 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 GJB2P29033 226 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 SLC1A4P43007 532 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 CCT2P78371 535 aaKnown RBP10.68□□□□□ -0.7
CASC3-209ENST00000583902 PPATQ06203 517 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 ZNF543Q08ER8 600 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 STK3Q13188 491 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 COL9A3Q14050 684 aaPredicted RBP10.68□□□□□ -0.7
CASC3-209ENST00000583902 LARP1BQ659C4 914 aaKnown RBP10.68□□□□□ -0.7
CASC3-209ENST00000583902 SLFN13Q68D06 897 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 GALNT17Q6IS24 598 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 BTNL9Q6UXG8 535 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 FAM160B2Q86V87 743 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 ERO1BQ86YB8 467 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms