RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 ARHGEF6Q15052 776 aa20.06■□□□□ 0.8
TSEN54-211ENST00000583818 ALX1Q15699 326 aa20.06■□□□□ 0.8
TSEN54-211ENST00000583818 TANGO6Q9C0B7 1094 aa20.06■□□□□ 0.8
TSEN54-211ENST00000583818 RBPJLQ9UBG7 517 aa20.06■□□□□ 0.8
TSEN54-211ENST00000583818 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.06■□□□□ 0.8
TSEN54-211ENST00000583818 MYPNQ86TC9 1320 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 HIP1O00291 1037 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 TSPY3P0CV98 308 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 TSPY8P0CW00 308 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 Q3C1V9 767 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 SH3TC2Q8TF17 1288 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 CHMP4CQ96CF2 233 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 CEP95Q96GE4 821 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 NBPF3Q9H094 633 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 VCPKMTQ9H867 229 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 ZNF287Q9HBT7 754 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 SRRDQ9UH36 339 aa20.05■□□□□ 0.8
TSEN54-211ENST00000583818 IGKV6D-41A0A0C4DH26 115 aa20.04■□□□□ 0.8
TSEN54-211ENST00000583818 TNPO2O14787 897 aaKnown RBP20.04■□□□□ 0.8
TSEN54-211ENST00000583818 NMT2O60551 498 aa20.04■□□□□ 0.8
TSEN54-211ENST00000583818 CNMDO75829 334 aa20.04■□□□□ 0.8
TSEN54-211ENST00000583818 NEFLP07196 543 aa20.04■□□□□ 0.8
TSEN54-211ENST00000583818 RRP12Q5JTH9 1297 aaKnown RBP20.04■□□□□ 0.8
TSEN54-211ENST00000583818 LRRC47Q8N1G4 583 aaKnown RBP20.04■□□□□ 0.8
TSEN54-211ENST00000583818 NKX2-3Q8TAU0 364 aa20.04■□□□□ 0.8
TSEN54-211ENST00000583818 CCDC136Q96JN2 1154 aa20.04■□□□□ 0.8
TSEN54-211ENST00000583818 NUP88Q99567 741 aaPredicted RBP20.04■□□□□ 0.8
TSEN54-211ENST00000583818 SH2D4AQ9H788 454 aa20.04■□□□□ 0.8
TSEN54-211ENST00000583818 TOMM22Q9NS69 142 aa20.04■□□□□ 0.8
TSEN54-211ENST00000583818 CLIP2Q9UDT6 1046 aa20.04■□□□□ 0.8
TSEN54-211ENST00000583818 ANAPC4Q9UJX5 808 aa20.04■□□□□ 0.8
TSEN54-211ENST00000583818 DOCK3Q8IZD9 2030 aa20.03■□□□□ 0.8
TSEN54-211ENST00000583818 SPDYE16A6NNV3 312 aaPredicted RBP20.03■□□□□ 0.8
TSEN54-211ENST00000583818 TBC1D10CQ8IV04 446 aa20.03■□□□□ 0.8
TSEN54-211ENST00000583818 NEDD1Q8NHV4 660 aa20.03■□□□□ 0.8
TSEN54-211ENST00000583818 MORF4L1Q9UBU8 362 aa20.03■□□□□ 0.8
TSEN54-211ENST00000583818 MYH4Q9Y623 1939 aa20.03■□□□□ 0.8
TSEN54-211ENST00000583818 RANBP6O60518 1105 aaKnown RBP20.02■□□□□ 0.8
TSEN54-211ENST00000583818 CHMLP26374 656 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 MFAP1P55081 439 aaKnown RBP20.02■□□□□ 0.8
TSEN54-211ENST00000583818 ERVK-9P63128 1117 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 ERVK-24P63145 666 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 SLC9C1Q4G0N8 1177 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 FAM83BQ5T0W9 1011 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 GPRC5AQ8NFJ5 357 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 RAET1EQ8TD07 263 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 PORCNQ9H237 461 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 FBXO28Q9NVF7 368 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 MTMR4Q9NYA4 1195 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 BTBD7Q9P203 1132 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 NYAP2Q9P242 653 aa20.02■□□□□ 0.8
TSEN54-211ENST00000583818 RLFQ13129 1914 aa20.02■□□□□ 0.79
TSEN54-211ENST00000583818 ZMYM6O95789 1325 aa20.02■□□□□ 0.79
TSEN54-211ENST00000583818 PLIN4Q96Q06 1357 aa20.01■□□□□ 0.79
TSEN54-211ENST00000583818 TSPY2A6NKD2 308 aa20.01■□□□□ 0.79
TSEN54-211ENST00000583818 FLOT1O75955 427 aa20.01■□□□□ 0.79
TSEN54-211ENST00000583818 GNRH1P01148 92 aa20.01■□□□□ 0.79
TSEN54-211ENST00000583818 HOXD10P28358 340 aa20.01■□□□□ 0.79
TSEN54-211ENST00000583818 FLT3LGP49771 235 aa20.01■□□□□ 0.79
TSEN54-211ENST00000583818 LPAR1Q92633 364 aa20.01■□□□□ 0.79
TSEN54-211ENST00000583818 GOPCQ9HD26 462 aa20.01■□□□□ 0.79
TSEN54-211ENST00000583818 BRCA2P51587 3418 aa20.01■□□□□ 0.79
TSEN54-211ENST00000583818 WDR46O15213 610 aaKnown RBP20■□□□□ 0.79
TSEN54-211ENST00000583818 ATG4CQ96DT6 458 aa20■□□□□ 0.79
TSEN54-211ENST00000583818 IL17RBQ9NRM6 502 aa20■□□□□ 0.79
TSEN54-211ENST00000583818 F5H6K3 240 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 TTLL1O95922 423 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 NDUFB10O96000 172 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 ELNP15502 786 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 KLRC3Q07444 240 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 COG2Q14746 738 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 RASGRP2Q7LDG7 609 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 COA7Q96BR5 231 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 RABGAP1Q9Y3P9 1069 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 LAMA4Q16363 1823 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 PARP14Q460N5 1801 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 NEDD4P46934 1319 aa19.99■□□□□ 0.79
TSEN54-211ENST00000583818 ORC4O43929 436 aa19.98■□□□□ 0.79
TSEN54-211ENST00000583818 CENPBP07199 599 aaPredicted RBP19.98■□□□□ 0.79
TSEN54-211ENST00000583818 FGRP09769 529 aa19.98■□□□□ 0.79
TSEN54-211ENST00000583818 DSG3P32926 999 aa19.98■□□□□ 0.79
TSEN54-211ENST00000583818 PRMT2P55345 433 aa19.98■□□□□ 0.79
TSEN54-211ENST00000583818 PTH1RQ03431 593 aa19.98■□□□□ 0.79
TSEN54-211ENST00000583818 AKNAD1Q5T1N1 836 aa19.98■□□□□ 0.79
TSEN54-211ENST00000583818 WDR78Q5VTH9 848 aa19.98■□□□□ 0.79
TSEN54-211ENST00000583818 GTF3C2Q8WUA4 911 aaPredicted RBP19.98■□□□□ 0.79
TSEN54-211ENST00000583818 ARMC5Q96C12 935 aa19.98■□□□□ 0.79
TSEN54-211ENST00000583818 ZNF333Q96JL9 665 aa19.98■□□□□ 0.79
TSEN54-211ENST00000583818 DSCC1Q9BVC3 393 aa19.98■□□□□ 0.79
TSEN54-211ENST00000583818 STX8Q9UNK0 236 aa19.98■□□□□ 0.79
TSEN54-211ENST00000583818 PLXNB2O15031 1838 aa19.97■□□□□ 0.79
TSEN54-211ENST00000583818 A0A0G2JMZ2 1700 aa19.97■□□□□ 0.79
TSEN54-211ENST00000583818 ZNF213O14771 459 aa19.97■□□□□ 0.79
TSEN54-211ENST00000583818 GRK4P32298 578 aa19.97■□□□□ 0.79
TSEN54-211ENST00000583818 LBX2Q6XYB7 198 aa19.97■□□□□ 0.79
TSEN54-211ENST00000583818 MFSD6Q6ZSS7 791 aa19.97■□□□□ 0.79
TSEN54-211ENST00000583818 CCAR1Q8IX12 1150 aaKnown RBP19.97■□□□□ 0.79
TSEN54-211ENST00000583818 STAG1Q8WVM7 1258 aa19.97■□□□□ 0.79
TSEN54-211ENST00000583818 HOXC10Q9NYD6 342 aa19.97■□□□□ 0.79
TSEN54-211ENST00000583818 MTMR7Q9Y216 660 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms