RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 RBM5P52756 815 aaKnown RBP eCLIP14.05□□□□□ -0.165e-10■■■■□ 19.6
GGA3-217ENST00000583667 PPIL2Q13356 520 aa14.05□□□□□ -0.16
GGA3-217ENST00000583667 TNFAIP1Q13829 316 aa14.05□□□□□ -0.16
GGA3-217ENST00000583667 COL9A3Q14050 684 aaPredicted RBP14.05□□□□□ -0.16
GGA3-217ENST00000583667 TJAP1Q5JTD0 557 aa14.05□□□□□ -0.16
GGA3-217ENST00000583667 CLEC17AQ6ZS10 378 aa14.05□□□□□ -0.16
GGA3-217ENST00000583667 ANKRD23Q86SG2 305 aa14.05□□□□□ -0.16
GGA3-217ENST00000583667 MIGA1Q8NAN2 632 aa14.05□□□□□ -0.16
GGA3-217ENST00000583667 STAG1Q8WVM7 1258 aa14.05□□□□□ -0.16
GGA3-217ENST00000583667 ZNF274Q96GC6 653 aaPredicted RBP14.05□□□□□ -0.16
GGA3-217ENST00000583667 ZNF70Q9UC06 446 aaPredicted RBP14.05□□□□□ -0.16
GGA3-217ENST00000583667 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.05□□□□□ -0.16
GGA3-217ENST00000583667 ECM29Q5VYK3 1845 aa14.05□□□□□ -0.16
GGA3-217ENST00000583667 GAKO14976 1311 aa14.05□□□□□ -0.16
GGA3-217ENST00000583667 BCRP11274 1271 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 PLCG2P16885 1265 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 HDLBPQ00341 1268 aaKnown RBP14.04□□□□□ -0.16
GGA3-217ENST00000583667 MDM2Q00987 491 aaPredicted RBP14.04□□□□□ -0.16
GGA3-217ENST00000583667 TRDNQ13061 729 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 RAB3GAP1Q15042 981 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 ME3Q16798 604 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 MFSD14BQ5SR56 506 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 AKNAD1Q5T1N1 836 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 MYLIPQ8WY64 445 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 ZKSCAN4Q969J2 545 aaPredicted RBP14.04□□□□□ -0.16
GGA3-217ENST00000583667 TMEM39BQ9GZU3 492 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 RNF41Q9H4P4 317 aaPredicted RBP14.04□□□□□ -0.16
GGA3-217ENST00000583667 TPCN1Q9ULQ1 816 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 MROH7-TTC4A0A0A0MT08 1334 aa14.04□□□□□ -0.16
GGA3-217ENST00000583667 TDO2P48775 406 aa14.03□□□□□ -0.16
GGA3-217ENST00000583667 DYNLL1P63167 89 aaKnown RBP14.03□□□□□ -0.16
GGA3-217ENST00000583667 IRF5Q13568 498 aa14.03□□□□□ -0.16
GGA3-217ENST00000583667 GRIK5Q16478 980 aa14.03□□□□□ -0.16
GGA3-217ENST00000583667 Q6ZUG5 572 aa14.03□□□□□ -0.16
GGA3-217ENST00000583667 RALYLQ86SE5 291 aaKnown RBP14.03□□□□□ -0.16
GGA3-217ENST00000583667 SPRYD3Q8NCJ5 442 aa14.03□□□□□ -0.16
GGA3-217ENST00000583667 TMEM87BQ96K49 555 aa14.03□□□□□ -0.16
GGA3-217ENST00000583667 KRT23Q9C075 422 aa14.03□□□□□ -0.16
GGA3-217ENST00000583667 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.03□□□□□ -0.16
GGA3-217ENST00000583667 C11orf49Q9H6J7 331 aa14.03□□□□□ -0.16
GGA3-217ENST00000583667 TDRD3Q9H7E2 651 aaKnown RBP14.03□□□□□ -0.16
GGA3-217ENST00000583667 LAMA4Q16363 1823 aa14.03□□□□□ -0.16
GGA3-217ENST00000583667 TCP10L2B9ZVM9 353 aa14.02□□□□□ -0.17
GGA3-217ENST00000583667 PFKFB2O60825 505 aa14.02□□□□□ -0.17
GGA3-217ENST00000583667 HAND2P61296 217 aa14.02□□□□□ -0.17
GGA3-217ENST00000583667 HHIPL2Q6UWX4 724 aa14.02□□□□□ -0.17
GGA3-217ENST00000583667 TBC1D10CQ8IV04 446 aa14.02□□□□□ -0.17
GGA3-217ENST00000583667 LLPHQ9BRT6 129 aaKnown RBP14.02□□□□□ -0.17
GGA3-217ENST00000583667 DCP1AQ9NPI6 582 aaPredicted RBP14.02□□□□□ -0.17
GGA3-217ENST00000583667 CDH23Q9H251 3354 aa14.02□□□□□ -0.17
GGA3-217ENST00000583667 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
GGA3-217ENST00000583667 PRC1O43663 620 aa14.01□□□□□ -0.17
GGA3-217ENST00000583667 LIFRP42702 1097 aa14.01□□□□□ -0.17
GGA3-217ENST00000583667 ANTXR2P58335 489 aa14.01□□□□□ -0.17
GGA3-217ENST00000583667 PPATQ06203 517 aa14.01□□□□□ -0.17
GGA3-217ENST00000583667 PPARAQ07869 468 aa14.01□□□□□ -0.17
GGA3-217ENST00000583667 MOGSQ13724 837 aa14.01□□□□□ -0.17
GGA3-217ENST00000583667 CTR9Q6PD62 1173 aa14.01□□□□□ -0.17
GGA3-217ENST00000583667 MFSD6Q6ZSS7 791 aa14.01□□□□□ -0.17
GGA3-217ENST00000583667 WRNIP1Q96S55 665 aa14.01□□□□□ -0.17
GGA3-217ENST00000583667 NOL10Q9BSC4 688 aaKnown RBP14.01□□□□□ -0.17
GGA3-217ENST00000583667 AATFQ9NY61 560 aaKnown RBP eCLIP14.01□□□□□ -0.17
GGA3-217ENST00000583667 ARPP21Q9UBL0 812 aaPredicted RBP14.01□□□□□ -0.17
GGA3-217ENST00000583667 LARGE1O95461 756 aa14□□□□□ -0.17
GGA3-217ENST00000583667 CYP2C8P10632 490 aa14□□□□□ -0.17
GGA3-217ENST00000583667 ST3GAL1Q11201 340 aa14□□□□□ -0.17
GGA3-217ENST00000583667 SGMS1Q86VZ5 419 aa14□□□□□ -0.17
GGA3-217ENST00000583667 SDR42E1Q8WUS8 393 aa14□□□□□ -0.17
GGA3-217ENST00000583667 BRF1Q92994 677 aa14□□□□□ -0.17
GGA3-217ENST00000583667 GTF3C6Q969F1 213 aa14□□□□□ -0.17
GGA3-217ENST00000583667 TAOK2Q9UL54 1235 aa14□□□□□ -0.17
GGA3-217ENST00000583667 JAG2Q9Y219 1238 aa14□□□□□ -0.17
GGA3-217ENST00000583667 PFASO15067 1338 aa13.99□□□□□ -0.17
GGA3-217ENST00000583667 USP17L12C9JPN9 530 aa13.99□□□□□ -0.17
GGA3-217ENST00000583667 USP17L21D6R901 530 aa13.99□□□□□ -0.17
GGA3-217ENST00000583667 ORC4O43929 436 aa13.99□□□□□ -0.17
GGA3-217ENST00000583667 FOSL2P15408 326 aa13.99□□□□□ -0.17
GGA3-217ENST00000583667 RHBDL3P58872 404 aa13.99□□□□□ -0.17
GGA3-217ENST00000583667 DIXDC1Q155Q3 683 aa13.99□□□□□ -0.17
GGA3-217ENST00000583667 TMTC2Q8N394 836 aa13.99□□□□□ -0.17
GGA3-217ENST00000583667 RGS22Q8NE09 1264 aa13.99□□□□□ -0.17
GGA3-217ENST00000583667 IGDCC4Q8TDY8 1250 aa13.99□□□□□ -0.17
GGA3-217ENST00000583667 TCEANC2Q96MN5 208 aa13.99□□□□□ -0.17
GGA3-217ENST00000583667 TTYH1Q9H313 450 aaPredicted RBP13.99□□□□□ -0.17
GGA3-217ENST00000583667 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
GGA3-217ENST00000583667 SH2B2O14492 632 aaPredicted RBP13.98□□□□□ -0.17
GGA3-217ENST00000583667 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
GGA3-217ENST00000583667 BRD1O95696 1058 aa13.98□□□□□ -0.17
GGA3-217ENST00000583667 SLC3A2P08195 630 aaKnown RBP13.98□□□□□ -0.17
GGA3-217ENST00000583667 PDIA3P30101 505 aaKnown RBP13.98□□□□□ -0.17
GGA3-217ENST00000583667 BTDP43251 543 aa13.98□□□□□ -0.17
GGA3-217ENST00000583667 TNNI2P48788 182 aa13.98□□□□□ -0.17
GGA3-217ENST00000583667 RCAN1P53805 252 aa13.98□□□□□ -0.17
GGA3-217ENST00000583667 FGD1P98174 961 aa13.98□□□□□ -0.17
GGA3-217ENST00000583667 NFKBIBQ15653 356 aa13.98□□□□□ -0.17
GGA3-217ENST00000583667 C12orf60Q5U649 245 aa13.98□□□□□ -0.17
GGA3-217ENST00000583667 SMARCC2Q8TAQ2 1214 aa13.98□□□□□ -0.17
GGA3-217ENST00000583667 SH3RF3Q8TEJ3 882 aaPredicted RBP13.98□□□□□ -0.17
GGA3-217ENST00000583667 PARK7Q99497 189 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms