RNA–Protein interactions for RNA: ENST00000583483.1

CDH8-210, Transcript of cadherin 8, humanhuman

TSL 3

Gene CDH8, Length 380 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-210ENST00000583483 ERVV-2B6SEH9 535 aa8.38□□□□□ -1.07
CDH8-210ENST00000583483 CYP27B1O15528 508 aa8.38□□□□□ -1.07
CDH8-210ENST00000583483 CPNE3O75131 537 aaKnown RBP8.38□□□□□ -1.07
CDH8-210ENST00000583483 EVA1CP58658 441 aa8.38□□□□□ -1.07
CDH8-210ENST00000583483 TAGLNQ01995 201 aaKnown RBP8.38□□□□□ -1.07
CDH8-210ENST00000583483 ENOX2Q16206 610 aaKnown RBP8.38□□□□□ -1.07
CDH8-210ENST00000583483 CEP135Q66GS9 1140 aa8.38□□□□□ -1.07
CDH8-210ENST00000583483 GDF6Q6KF10 455 aaPredicted RBP8.38□□□□□ -1.07
CDH8-210ENST00000583483 NXPE3Q969Y0 559 aa8.38□□□□□ -1.07
CDH8-210ENST00000583483 SH2B1Q9NRF2 756 aaPredicted RBP8.38□□□□□ -1.07
CDH8-210ENST00000583483 BTG4Q9NY30 223 aa8.38□□□□□ -1.07
CDH8-210ENST00000583483 ZNF790Q6PG37 636 aa8.37□□□□□ -1.07
CDH8-210ENST00000583483 NPAS4Q8IUM7 802 aa8.37□□□□□ -1.07
CDH8-210ENST00000583483 DMRTC2Q8IXT2 367 aaPredicted RBP8.37□□□□□ -1.07
CDH8-210ENST00000583483 TTC5Q8N0Z6 440 aa8.37□□□□□ -1.07
CDH8-210ENST00000583483 SPACA7Q96KW9 195 aa8.37□□□□□ -1.07
CDH8-210ENST00000583483 DNAJC25Q9H1X3 360 aa8.37□□□□□ -1.07
CDH8-210ENST00000583483 MIS18AQ9NYP9 233 aa8.37□□□□□ -1.07
CDH8-210ENST00000583483 DBF4Q9UBU7 674 aaPredicted RBP8.37□□□□□ -1.07
CDH8-210ENST00000583483 MKL2Q9ULH7 1088 aa8.37□□□□□ -1.07
CDH8-210ENST00000583483 AFDNP55196 1824 aaKnown RBP8.37□□□□□ -1.07
CDH8-210ENST00000583483 PNMA6FA0A0J9YX94 578 aa8.36□□□□□ -1.07
CDH8-210ENST00000583483 FAM181BA6NEQ2 426 aa8.36□□□□□ -1.07
CDH8-210ENST00000583483 METTL12A8MUP2 240 aa8.36□□□□□ -1.07
CDH8-210ENST00000583483 SMC5Q8IY18 1101 aa8.36□□□□□ -1.07
CDH8-210ENST00000583483 GCC1Q96CN9 775 aa8.36□□□□□ -1.07
CDH8-210ENST00000583483 FMNL2Q96PY5 1086 aa8.36□□□□□ -1.07
CDH8-210ENST00000583483 LACRTQ9GZZ8 138 aa8.36□□□□□ -1.07
CDH8-210ENST00000583483 NPHS2Q9NP85 383 aa8.36□□□□□ -1.07
CDH8-210ENST00000583483 RREB1Q92766 1687 aa8.36□□□□□ -1.07
CDH8-210ENST00000583483 TJP1Q07157 1748 aa8.35□□□□□ -1.07
CDH8-210ENST00000583483 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
CDH8-210ENST00000583483 PDE2AO00408 941 aaPredicted RBP8.35□□□□□ -1.07
CDH8-210ENST00000583483 GNB5O14775 395 aa8.35□□□□□ -1.07
CDH8-210ENST00000583483 GNAI3P08754 354 aa8.35□□□□□ -1.07
CDH8-210ENST00000583483 MAPK8P45983 427 aa8.35□□□□□ -1.07
CDH8-210ENST00000583483 CABP4P57796 275 aa8.35□□□□□ -1.07
CDH8-210ENST00000583483 MSL1Q68DK7 614 aa8.35□□□□□ -1.07
CDH8-210ENST00000583483 SCARF2Q96GP6 870 aaPredicted RBP8.35□□□□□ -1.07
CDH8-210ENST00000583483 TCF12Q99081 682 aa8.35□□□□□ -1.07
CDH8-210ENST00000583483 HYPKQ9NX55 129 aa8.35□□□□□ -1.07
CDH8-210ENST00000583483 ANKRD36CQ5JPF3 1778 aa8.35□□□□□ -1.07
CDH8-210ENST00000583483 SPATA31A1Q5TZJ5 1347 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 NHSQ6T4R5 1651 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 TM4SF5O14894 197 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 HMMRO75330 724 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 DDX58O95786 925 aaKnown RBP8.34□□□□□ -1.07
CDH8-210ENST00000583483 SNRPA1P09661 255 aaKnown RBP8.34□□□□□ -1.07
CDH8-210ENST00000583483 EDN3P14138 238 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 SPRED3Q2MJR0 410 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 RPAP2Q8IXW5 612 aaPredicted RBP8.34□□□□□ -1.07
CDH8-210ENST00000583483 IL22RA1Q8N6P7 574 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 TMEM102Q8N9M5 508 aaPredicted RBP8.34□□□□□ -1.07
CDH8-210ENST00000583483 GLIS3Q8NEA6 775 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 DDX21Q9NR30 783 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDH8-210ENST00000583483 CHPF2Q9P2E5 772 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 HDAC5Q9UQL6 1122 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 BCL9O00512 1426 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 ADCY9O60503 1353 aa8.34□□□□□ -1.07
CDH8-210ENST00000583483 SPATA31A5Q5VU36 1347 aa8.33□□□□□ -1.08
CDH8-210ENST00000583483 SPATA31A7Q8IWB4 1347 aa8.33□□□□□ -1.08
CDH8-210ENST00000583483 DEAF1O75398 565 aaPredicted RBP8.33□□□□□ -1.08
CDH8-210ENST00000583483 IGHDP01880 384 aa8.33□□□□□ -1.08
CDH8-210ENST00000583483 CDC25BP30305 580 aa8.33□□□□□ -1.08
CDH8-210ENST00000583483 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDH8-210ENST00000583483 TMCO4Q5TGY1 634 aa8.33□□□□□ -1.08
CDH8-210ENST00000583483 KIAA0319Q5VV43 1072 aa8.33□□□□□ -1.08
CDH8-210ENST00000583483 HGSNATQ68CP4 663 aa8.33□□□□□ -1.08
CDH8-210ENST00000583483 ANKRD44Q8N8A2 993 aa8.33□□□□□ -1.08
CDH8-210ENST00000583483 ADAM19Q9H013 955 aa8.33□□□□□ -1.08
CDH8-210ENST00000583483 RBSNQ9H1K0 784 aa8.33□□□□□ -1.08
CDH8-210ENST00000583483 COL5A3P25940 1745 aaPredicted RBP8.32□□□□□ -1.08
CDH8-210ENST00000583483 TUBGCP6Q96RT7 1819 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 KCNQ3O43525 872 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 ALDH1L1O75891 902 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDH8-210ENST00000583483 GRIA4P48058 902 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 MFAP1P55081 439 aaKnown RBP8.32□□□□□ -1.08
CDH8-210ENST00000583483 PIP4K2BP78356 416 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 TRAPPC3LQ5T215 181 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 G2E3Q7L622 706 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 CCNJLQ8IV13 435 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 DNAAF4Q8WXU2 420 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 ZNF496Q96IT1 587 aaPredicted RBP8.32□□□□□ -1.08
CDH8-210ENST00000583483 SRCIN1Q9C0H9 1055 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 TMOD3Q9NYL9 352 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 COL15A1P39059 1388 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 BCL9LQ86UU0 1499 aa8.32□□□□□ -1.08
CDH8-210ENST00000583483 A0A0A0MRY4 1105 aa8.31□□□□□ -1.08
CDH8-210ENST00000583483 GNAI2P04899 355 aa8.31□□□□□ -1.08
CDH8-210ENST00000583483 EIF2S2P20042 333 aaKnown RBP8.31□□□□□ -1.08
CDH8-210ENST00000583483 EPHA1P21709 976 aa8.31□□□□□ -1.08
CDH8-210ENST00000583483 NUCB1Q02818 461 aa8.31□□□□□ -1.08
CDH8-210ENST00000583483 RASSF7Q02833 373 aa8.31□□□□□ -1.08
CDH8-210ENST00000583483 KCNMA1Q12791 1236 aa8.31□□□□□ -1.08
CDH8-210ENST00000583483 GRM2Q14416 872 aa8.31□□□□□ -1.08
CDH8-210ENST00000583483 CEP85Q6P2H3 762 aa8.31□□□□□ -1.08
CDH8-210ENST00000583483 TXNDC11Q6PKC3 985 aa8.31□□□□□ -1.08
CDH8-210ENST00000583483 VN1R5Q7Z5H4 357 aa8.31□□□□□ -1.08
CDH8-210ENST00000583483 PODNQ7Z5L7 613 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms