RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 TMX2Q9Y320 296 aa16.49■□□□□ 0.23
GGA3-216ENST00000583282 ERICH2A1L162 156 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 C19orf81C9J6K1 198 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 NDUFB10O96000 172 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 MCM5P33992 734 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 MAP2K2P36507 400 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 NT5C2P49902 561 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 SART3Q15020 963 aaKnown RBP16.48■□□□□ 0.23
GGA3-216ENST00000583282 TMEM67Q5HYA8 995 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 SH3D19Q5HYK7 790 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 PPP4R3BQ5MIZ7 849 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 IFIT1BQ5T764 474 aaKnown RBP16.48■□□□□ 0.23
GGA3-216ENST00000583282 BLOC1S2Q6QNY1 142 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
GGA3-216ENST00000583282 FASTKD5Q7L8L6 764 aaKnown RBP16.48■□□□□ 0.23
GGA3-216ENST00000583282 IFNL1Q8IU54 200 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 PROCA1Q8NCQ7 364 aaPredicted RBP16.48■□□□□ 0.23
GGA3-216ENST00000583282 NUP88Q99567 741 aaPredicted RBP16.48■□□□□ 0.23
GGA3-216ENST00000583282 PTPN18Q99952 460 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 GPHNQ9NQX3 736 aaPredicted RBP16.48■□□□□ 0.23
GGA3-216ENST00000583282 TCP11L1Q9NUJ3 509 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 AGTPBP1Q9UPW5 1226 aa16.48■□□□□ 0.23
GGA3-216ENST00000583282 TOP1P11387 765 aaKnown RBP16.47■□□□□ 0.23
GGA3-216ENST00000583282 WTAPQ15007 396 aa16.47■□□□□ 0.23
GGA3-216ENST00000583282 CCDC96Q2M329 555 aa16.47■□□□□ 0.23
GGA3-216ENST00000583282 TSGA10IPQ3SY00 556 aa16.47■□□□□ 0.23
GGA3-216ENST00000583282 RCSD1Q6JBY9 416 aa16.47■□□□□ 0.23
GGA3-216ENST00000583282 C12orf42Q96LP6 360 aa16.47■□□□□ 0.23
GGA3-216ENST00000583282 TMEM47Q9BQJ4 181 aa16.47■□□□□ 0.23
GGA3-216ENST00000583282 UPF3BQ9BZI7 483 aaKnown RBP16.47■□□□□ 0.23
GGA3-216ENST00000583282 TANGO6Q9C0B7 1094 aa16.47■□□□□ 0.23
GGA3-216ENST00000583282 RPAP3Q9H6T3 665 aaPredicted RBP16.47■□□□□ 0.23
GGA3-216ENST00000583282 KAT14Q9H8E8 782 aa16.47■□□□□ 0.23
GGA3-216ENST00000583282 SENP2Q9HC62 589 aa16.47■□□□□ 0.23
GGA3-216ENST00000583282 A0A0G2JMZ2 1700 aa16.47■□□□□ 0.23
GGA3-216ENST00000583282 TESPA1A2RU30 521 aaPredicted RBP16.46■□□□□ 0.23
GGA3-216ENST00000583282 PDHXO00330 501 aa16.46■□□□□ 0.23
GGA3-216ENST00000583282 SH2B2O14492 632 aaPredicted RBP16.46■□□□□ 0.23
GGA3-216ENST00000583282 SEC23AQ15436 765 aa16.46■□□□□ 0.23
GGA3-216ENST00000583282 CCDC178Q5BJE1 867 aa16.46■□□□□ 0.23
GGA3-216ENST00000583282 FAM83BQ5T0W9 1011 aa16.46■□□□□ 0.23
GGA3-216ENST00000583282 SLFN13Q68D06 897 aa16.46■□□□□ 0.23
GGA3-216ENST00000583282 GPAT2Q6NUI2 795 aa16.46■□□□□ 0.23
GGA3-216ENST00000583282 BACH2Q9BYV9 841 aa16.46■□□□□ 0.23
GGA3-216ENST00000583282 C22orf23Q9BZE7 217 aa16.46■□□□□ 0.23
GGA3-216ENST00000583282 FRMPD2Q68DX3 1309 aaPredicted RBP16.45■□□□□ 0.22
GGA3-216ENST00000583282 F5H6K3 240 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 RPS6KB1P23443 525 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 PSMA5P28066 241 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 IRX3P78415 501 aaPredicted RBP16.45■□□□□ 0.22
GGA3-216ENST00000583282 FGD1P98174 961 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 KLRC3Q07444 240 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
GGA3-216ENST00000583282 NFXL1Q6ZNB6 911 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 ANKRD23Q86SG2 305 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 PNMA1Q8ND90 353 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 LPAR1Q92633 364 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 LY9Q9HBG7 655 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 TSKSQ9UJT2 592 aa16.45■□□□□ 0.22
GGA3-216ENST00000583282 WDR46O15213 610 aaKnown RBP16.44■□□□□ 0.22
GGA3-216ENST00000583282 HMGB1P09429 215 aaKnown RBP16.44■□□□□ 0.22
GGA3-216ENST00000583282 CYP2C8P10632 490 aa16.44■□□□□ 0.22
GGA3-216ENST00000583282 TM4SF4P48230 202 aa16.44■□□□□ 0.22
GGA3-216ENST00000583282 NOVP48745 357 aa16.44■□□□□ 0.22
GGA3-216ENST00000583282 OTUD7BQ6GQQ9 843 aa16.44■□□□□ 0.22
GGA3-216ENST00000583282 DHX32Q7L7V1 743 aaKnown RBP16.44■□□□□ 0.22
GGA3-216ENST00000583282 DGKHQ86XP1 1220 aa16.44■□□□□ 0.22
GGA3-216ENST00000583282 GMCL1P1Q8NEA9 526 aa16.44■□□□□ 0.22
GGA3-216ENST00000583282 TMEM87BQ96K49 555 aa16.44■□□□□ 0.22
GGA3-216ENST00000583282 PARK7Q99497 189 aaKnown RBP16.44■□□□□ 0.22
GGA3-216ENST00000583282 MYL10Q9BUA6 226 aa16.44■□□□□ 0.22
GGA3-216ENST00000583282 COL11A1P12107 1806 aaPredicted RBP16.44■□□□□ 0.22
GGA3-216ENST00000583282 RLFQ13129 1914 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 SLC1A4P43007 532 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 INHBEP58166 350 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 ANAPC15P60006 121 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 MAP2K1Q02750 393 aaPredicted RBP16.43■□□□□ 0.22
GGA3-216ENST00000583282 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
GGA3-216ENST00000583282 PABPC4Q13310 644 aaKnown RBP eCLIP16.43■□□□□ 0.22
GGA3-216ENST00000583282 CRHR2Q13324 411 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 KCTD1Q719H9 257 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 REM2Q8IYK8 340 aaPredicted RBP16.43■□□□□ 0.22
GGA3-216ENST00000583282 SMCR8Q8TEV9 937 aaPredicted RBP16.43■□□□□ 0.22
GGA3-216ENST00000583282 MKL1Q969V6 931 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 TTC14Q96N46 770 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 BEGAINQ9BUH8 593 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 PNMA3Q9UL41 463 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 NAP1L2Q9ULW6 460 aaPredicted RBP16.43■□□□□ 0.22
GGA3-216ENST00000583282 SYNPO2Q9UMS6 1093 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 CYP46A1Q9Y6A2 500 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 WDR19Q8NEZ3 1342 aa16.43■□□□□ 0.22
GGA3-216ENST00000583282 ZSWIM8A7E2V4 1837 aa16.42■□□□□ 0.22
GGA3-216ENST00000583282 CCDC69A6NI79 296 aa16.42■□□□□ 0.22
GGA3-216ENST00000583282 USP17L15C9J2P7 530 aa16.42■□□□□ 0.22
GGA3-216ENST00000583282 USP17L13C9JLJ4 530 aa16.42■□□□□ 0.22
GGA3-216ENST00000583282 USP17L11C9JVI0 530 aa16.42■□□□□ 0.22
GGA3-216ENST00000583282 USP17L18D6R9N7 530 aa16.42■□□□□ 0.22
GGA3-216ENST00000583282 USP17L22D6RA61 530 aa16.42■□□□□ 0.22
GGA3-216ENST00000583282 USP17L17D6RBQ6 530 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms