RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 GZF1Q9H116 711 aaPredicted RBP7.8□□□□□ -1.16
NDEL1-216ENST00000583066 EPHX3Q9H6B9 360 aa7.8□□□□□ -1.16
NDEL1-216ENST00000583066 ZCCHC17Q9NP64 241 aaKnown RBP7.8□□□□□ -1.16
NDEL1-216ENST00000583066 GPR108Q9NPR9 543 aa7.8□□□□□ -1.16
NDEL1-216ENST00000583066 SNCAIPQ9Y6H5 919 aa7.8□□□□□ -1.16
NDEL1-216ENST00000583066 MED23Q9ULK4 1368 aa7.8□□□□□ -1.16
NDEL1-216ENST00000583066 XDHP47989 1333 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 SPDYE5A6NIY4 337 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 IGKV5-2P06315 115 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 CETPP11597 493 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 ATP5JP18859 108 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 PDCP20941 246 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 FCGRTP55899 365 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 CCDC173Q0VFZ6 552 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 AIMP1Q12904 312 aaKnown RBP7.79□□□□□ -1.16
NDEL1-216ENST00000583066 LRRC26Q2I0M4 334 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 C9orf50Q5SZB4 431 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 TSHZ3Q63HK5 1081 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 COPS6Q7L5N1 327 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 TMEM87AQ8NBN3 555 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 HELBQ8NG08 1087 aaPredicted RBP7.79□□□□□ -1.16
NDEL1-216ENST00000583066 XAGE3Q8WTP9 111 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 SUCLG2Q96I99 432 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 PRMT6Q96LA8 375 aaPredicted RBP7.79□□□□□ -1.16
NDEL1-216ENST00000583066 TEPSINQ96N21 525 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 TTC14Q96N46 770 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 CCDC85AQ96PX6 553 aaPredicted RBP7.79□□□□□ -1.16
NDEL1-216ENST00000583066 TMUB1Q9BVT8 246 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 BICC1Q9H694 974 aaKnown RBP7.79□□□□□ -1.16
NDEL1-216ENST00000583066 SNX14Q9Y5W7 946 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 CYP46A1Q9Y6A2 500 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 FRMPD3Q5JV73 1810 aa7.79□□□□□ -1.16
NDEL1-216ENST00000583066 MYO9BQ13459 2157 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 F8W031 263 aaPredicted RBP7.78□□□□□ -1.16
NDEL1-216ENST00000583066 ATP5J2-PTCD1G3V325 749 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 PDHXO00330 501 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 WDHD1O75717 1129 aaPredicted RBP7.78□□□□□ -1.16
NDEL1-216ENST00000583066 BCRP11274 1271 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 TRIM32Q13049 653 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 GRIN2CQ14957 1233 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 NECTIN1Q15223 517 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 SHHQ15465 462 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 CWF19L2Q2TBE0 894 aaKnown RBP7.78□□□□□ -1.16
NDEL1-216ENST00000583066 LRRFIP1Q32MZ4 808 aaKnown RBP7.78□□□□□ -1.16
NDEL1-216ENST00000583066 HSP90AB3PQ58FF7 597 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 CWC27Q6UX04 472 aaKnown RBP7.78□□□□□ -1.16
NDEL1-216ENST00000583066 ZGPATQ8N5A5 531 aaKnown RBP7.78□□□□□ -1.16
NDEL1-216ENST00000583066 ANKLE1Q8NAG6 615 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 PPM1EQ8WY54 764 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 MAP4K1Q92918 833 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 TRIM44Q96DX7 344 aaPredicted RBP7.78□□□□□ -1.16
NDEL1-216ENST00000583066 KAZALD1Q96I82 304 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 PPP1R9BQ96SB3 815 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 SLC24A3Q9HC58 644 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 C11orf16Q9NQ32 467 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 PALD1Q9ULE6 856 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 ZDHHC9Q9Y397 364 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 CCDC171Q6TFL3 1326 aa7.78□□□□□ -1.16
NDEL1-216ENST00000583066 CHD9Q3L8U1 2897 aa7.77□□□□□ -1.16
NDEL1-216ENST00000583066 FAM86C2PA6NEL3 165 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 H7C1W4 665 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 IRS4O14654 1257 aaPredicted RBP7.77□□□□□ -1.17
NDEL1-216ENST00000583066 TRIM66O15016 1216 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 PRPF40AO75400 957 aaKnown RBP7.77□□□□□ -1.17
NDEL1-216ENST00000583066 CYP2C8P10632 490 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 ATP2B4P23634 1241 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 NASPP49321 788 aaPredicted RBP7.77□□□□□ -1.17
NDEL1-216ENST00000583066 GTF2IP78347 998 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 TRIM28Q13263 835 aaKnown RBP7.77□□□□□ -1.17
NDEL1-216ENST00000583066 SNAPC2Q13487 334 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 MOGSQ13724 837 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 ZSCAN23Q3MJ62 389 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 CFAP100Q494V2 611 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 TTLL5Q6EMB2 1281 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 RUFY3Q7L099 469 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 FAM184AQ8NB25 1140 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 MTMR14Q8NCE2 650 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 CCDC191Q8NCU4 936 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.77□□□□□ -1.17
NDEL1-216ENST00000583066 EAF2Q96CJ1 260 aaPredicted RBP7.77□□□□□ -1.17
NDEL1-216ENST00000583066 P2RX7Q99572 595 aaKnown RBP7.77□□□□□ -1.17
NDEL1-216ENST00000583066 MYD88Q99836 296 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 REPIN1Q9BWE0 567 aaKnown RBP7.77□□□□□ -1.17
NDEL1-216ENST00000583066 TMEM39BQ9GZU3 492 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 PDRG1Q9NUG6 133 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 THEGQ9P2T0 379 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 CSADQ9Y600 493 aa7.77□□□□□ -1.17
NDEL1-216ENST00000583066 PLXNB2O15031 1838 aa7.76□□□□□ -1.17
NDEL1-216ENST00000583066 CIAO1O76071 339 aa7.76□□□□□ -1.17
NDEL1-216ENST00000583066 HMGB1P09429 215 aaKnown RBP7.76□□□□□ -1.17
NDEL1-216ENST00000583066 ZSCAN22P10073 491 aaPredicted RBP7.76□□□□□ -1.17
NDEL1-216ENST00000583066 COL6A1P12109 1028 aa7.76□□□□□ -1.17
NDEL1-216ENST00000583066 CLCN1P35523 988 aa7.76□□□□□ -1.17
NDEL1-216ENST00000583066 IL15P40933 162 aaPredicted RBP7.76□□□□□ -1.17
NDEL1-216ENST00000583066 KCNJ4P48050 445 aa7.76□□□□□ -1.17
NDEL1-216ENST00000583066 AMHR2Q16671 573 aa7.76□□□□□ -1.17
NDEL1-216ENST00000583066 LRSAM1Q6UWE0 723 aa7.76□□□□□ -1.17
NDEL1-216ENST00000583066 ZBTB38Q8NAP3 1195 aaPredicted RBP7.76□□□□□ -1.17
NDEL1-216ENST00000583066 ATXN2LQ8WWM7 1075 aaKnown RBP7.76□□□□□ -1.17
NDEL1-216ENST00000583066 ZKSCAN4Q969J2 545 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms