RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 C10orf71Q711Q0 1435 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 PPIP5K2O43314 1243 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 LARGE1O95461 756 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 SYNE4Q8N205 404 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 ZKSCAN5Q9Y2L8 839 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 SLFN12Q8IYM2 578 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 PRIMPOLQ96LW4 560 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 GSDMAQ96QA5 445 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 USP28Q96RU2 1077 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 NCOA5Q9HCD5 579 aaKnown RBP11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 V9GY48 417 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 GUCY1B3Q02153 619 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 SLC15A2Q16348 729 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 LARGE2Q8N3Y3 721 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 KIAA1468Q9P260 1216 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 PSMA7O14818 248 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 ZNF202O95125 648 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 TUBB2AQ13885 445 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 KRT79Q5XKE5 535 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 TUBB2BQ9BVA1 445 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 STK17AQ9UEE5 414 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 SRGNP10124 158 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 ANO6Q4KMQ2 910 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 HEATR3Q7Z4Q2 680 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 REXO1Q8N1G1 1221 aaKnown RBP11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 RNF214Q8ND24 703 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 AGBL3Q8NEM8 1001 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 EPB41L4AQ9HCS5 686 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 NYAP2Q9P242 653 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 PPP1R12BO60237 982 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 ADCY5O95622 1261 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 SFPQP23246 707 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 STAT6P42226 847 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 CDK8P49336 464 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 ANTXR2P58335 489 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 RBM43Q6ZSC3 357 aaKnown RBP11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 CYB5R4Q7L1T6 521 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 SDR42E1Q8WUS8 393 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 CCDC51Q96ER9 411 aa11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 CCDC43Q96MW1 224 aaKnown RBP11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 NAP1L5Q96NT1 182 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC8-211ENST00000582539 PTPREP23469 700 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 PI16Q6UXB8 463 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 BRPF3Q9ULD4 1205 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 RRAGBQ5VZM2 374 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 ENAHQ8N8S7 591 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 ZNF397Q8NF99 534 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 LY75O60449 1722 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 USP14P54578 494 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 RESP18Q5W5W9 173 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 CHST3Q7LGC8 479 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 MAPKAPK5Q8IW41 473 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 SLC17A8Q8NDX2 589 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 PSMD1Q99460 953 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 FEZ1Q99689 392 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 PCDHA7Q9UN72 937 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 PLIN4Q96Q06 1357 aa11.47□□□□□ -0.57
TRAPPC8-211ENST00000582539 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 ADD1P35611 737 aaKnown RBP11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 WWC2Q6AWC2 1192 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 KRT26Q7Z3Y9 468 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 IL25Q9H293 177 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 GDPD2Q9HCC8 539 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 COL2A1P02458 1487 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 KLRF2D3W0D1 207 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 ZNF76P36508 570 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 FKBP15Q5T1M5 1219 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 CCDC70Q6NSX1 233 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 CNNM4Q6P4Q7 775 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 KRBA2Q6ZNG9 492 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 MCF2L2Q86YR7 1114 aa11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 LARP6Q9BRS8 491 aaKnown RBP11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 MRPL11Q9Y3B7 192 aaKnown RBP11.46□□□□□ -0.57
TRAPPC8-211ENST00000582539 SPDYE3A6NKU9 549 aa11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 DYNLL1P63167 89 aaKnown RBP11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 TPRNQ4KMQ1 711 aa11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 NEK8Q86SG6 692 aa11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 FCHSD1Q86WN1 690 aa11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 CLIP2Q9UDT6 1046 aa11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 PNMA6FA0A0J9YX94 578 aa11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 SEC23AQ15436 765 aa11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 CERKLQ49MI3 558 aaPredicted RBP11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 AKT1S1Q96B36 256 aa11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 NAA15Q9BXJ9 866 aaKnown RBP11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 PIM2Q9P1W9 311 aa11.46□□□□□ -0.58
TRAPPC8-211ENST00000582539 FAM237AA0A1B0GTK4 181 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 CRKP46108 304 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 ATP2B2Q01814 1243 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 EXOC1Q9NV70 894 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 RIMBP2O15034 1052 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 POSTNQ15063 836 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 MOXD1Q6UVY6 613 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 PAXBP1Q9Y5B6 917 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 PFKFB1P16118 471 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 NF2P35240 595 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 RTFDC1Q9BY42 306 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 HPS5Q9UPZ3 1129 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 DAAM1Q9Y4D1 1078 aa11.45□□□□□ -0.58
TRAPPC8-211ENST00000582539 LAMA4Q16363 1823 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms