RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 VCPKMTQ9H867 229 aa23.61■■□□□ 1.37
TOP3A-213ENST00000582230 WBP1LQ9NX94 342 aa23.61■■□□□ 1.37
TOP3A-213ENST00000582230 PDHXO00330 501 aa23.6■■□□□ 1.37
TOP3A-213ENST00000582230 SAGE1Q9NXZ1 904 aa23.6■■□□□ 1.37
TOP3A-213ENST00000582230 TOP1P11387 765 aaKnown RBP23.59■■□□□ 1.37
TOP3A-213ENST00000582230 CYB5R4Q7L1T6 521 aa23.59■■□□□ 1.37
TOP3A-213ENST00000582230 MB21D2Q8IYB1 491 aaPredicted RBP23.59■■□□□ 1.37
TOP3A-213ENST00000582230 ANKS1AQ92625 1134 aa23.59■■□□□ 1.37
TOP3A-213ENST00000582230 NEK1Q96PY6 1258 aa23.59■■□□□ 1.37
TOP3A-213ENST00000582230 ZKSCAN3Q9BRR0 538 aa23.59■■□□□ 1.37
TOP3A-213ENST00000582230 MTA3Q9BTC8 594 aa23.59■■□□□ 1.37
TOP3A-213ENST00000582230 RNF186Q9NXI6 227 aa23.59■■□□□ 1.37
TOP3A-213ENST00000582230 SNX14Q9Y5W7 946 aa23.59■■□□□ 1.37
TOP3A-213ENST00000582230 SEC24BO95487 1268 aa23.58■■□□□ 1.37
TOP3A-213ENST00000582230 HMGB1P09429 215 aaKnown RBP23.58■■□□□ 1.37
TOP3A-213ENST00000582230 VCAM1P19320 739 aa23.58■■□□□ 1.37
TOP3A-213ENST00000582230 HOXA7P31268 230 aaPredicted RBP23.58■■□□□ 1.37
TOP3A-213ENST00000582230 MCM5P33992 734 aa23.58■■□□□ 1.37
TOP3A-213ENST00000582230 DGKZQ13574 1117 aa23.58■■□□□ 1.37
TOP3A-213ENST00000582230 SART3Q15020 963 aaKnown RBP23.58■■□□□ 1.37
TOP3A-213ENST00000582230 TREML2Q5T2D2 321 aa23.58■■□□□ 1.37
TOP3A-213ENST00000582230 GMCL1P1Q8NEA9 526 aa23.58■■□□□ 1.37
TOP3A-213ENST00000582230 ERICH2A1L162 156 aa23.57■■□□□ 1.36
TOP3A-213ENST00000582230 F5H6K3 240 aa23.57■■□□□ 1.36
TOP3A-213ENST00000582230 KLRC3Q07444 240 aa23.57■■□□□ 1.36
TOP3A-213ENST00000582230 RCSD1Q6JBY9 416 aa23.57■■□□□ 1.36
TOP3A-213ENST00000582230 LRRC47Q8N1G4 583 aaKnown RBP23.57■■□□□ 1.36
TOP3A-213ENST00000582230 TMEM47Q9BQJ4 181 aa23.57■■□□□ 1.36
TOP3A-213ENST00000582230 CFHR5Q9BXR6 569 aa23.57■■□□□ 1.36
TOP3A-213ENST00000582230 PNMA3Q9UL41 463 aa23.57■■□□□ 1.36
TOP3A-213ENST00000582230 TNKSO95271 1327 aa23.57■■□□□ 1.36
TOP3A-213ENST00000582230 USP17L15C9J2P7 530 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 USP17L13C9JLJ4 530 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 USP17L11C9JVI0 530 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 USP17L18D6R9N7 530 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 USP17L22D6RA61 530 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 USP17L17D6RBQ6 530 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 USP17L19D6RCP7 530 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 USP17L20D6RJB6 530 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 IFIT3O14879 490 aaKnown RBP23.56■■□□□ 1.36
TOP3A-213ENST00000582230 WDR46O15213 610 aaKnown RBP23.56■■□□□ 1.36
TOP3A-213ENST00000582230 TRPA1O75762 1119 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 OSBPP22059 807 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 PSMA5P28066 241 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 USP17L24Q0WX57 530 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 TAF1CQ15572 869 aaPredicted RBP23.56■■□□□ 1.36
TOP3A-213ENST00000582230 ADCK5Q3MIX3 580 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 ENAHQ8N8S7 591 aaPredicted RBP23.56■■□□□ 1.36
TOP3A-213ENST00000582230 ZFYVE28Q9HCC9 887 aa23.56■■□□□ 1.36
TOP3A-213ENST00000582230 RAD21O60216 631 aa23.55■■□□□ 1.36
TOP3A-213ENST00000582230 KIAA1755Q5JYT7 1200 aa23.55■■□□□ 1.36
TOP3A-213ENST00000582230 IFFO2Q5TF58 517 aa23.55■■□□□ 1.36
TOP3A-213ENST00000582230 SPICE1Q8N0Z3 855 aa23.55■■□□□ 1.36
TOP3A-213ENST00000582230 TMEM87BQ96K49 555 aa23.55■■□□□ 1.36
TOP3A-213ENST00000582230 PARK7Q99497 189 aaKnown RBP23.55■■□□□ 1.36
TOP3A-213ENST00000582230 RPAP3Q9H6T3 665 aaPredicted RBP23.55■■□□□ 1.36
TOP3A-213ENST00000582230 WDR19Q8NEZ3 1342 aa23.55■■□□□ 1.36
TOP3A-213ENST00000582230 PRC1O43663 620 aa23.54■■□□□ 1.36
TOP3A-213ENST00000582230 NDUFB10O96000 172 aa23.54■■□□□ 1.36
TOP3A-213ENST00000582230 ANTXR2P58335 489 aa23.54■■□□□ 1.36
TOP3A-213ENST00000582230 ANAPC15P60006 121 aa23.54■■□□□ 1.36
TOP3A-213ENST00000582230 IRX3P78415 501 aaPredicted RBP23.54■■□□□ 1.36
TOP3A-213ENST00000582230 SEC23AQ15436 765 aa23.54■■□□□ 1.36
TOP3A-213ENST00000582230 IFIT1BQ5T764 474 aaKnown RBP23.54■■□□□ 1.36
TOP3A-213ENST00000582230 SLFN13Q68D06 897 aa23.54■■□□□ 1.36
TOP3A-213ENST00000582230 CATSPERGQ6ZRH7 1159 aa23.54■■□□□ 1.36
TOP3A-213ENST00000582230 DHX32Q7L7V1 743 aaKnown RBP23.54■■□□□ 1.36
TOP3A-213ENST00000582230 CHST3Q7LGC8 479 aa23.54■■□□□ 1.36
TOP3A-213ENST00000582230 JAKMIP1Q96N16 626 aaKnown RBP23.54■■□□□ 1.36
TOP3A-213ENST00000582230 KAT14Q9H8E8 782 aa23.54■■□□□ 1.36
TOP3A-213ENST00000582230 LOC285556D6RIA3 1793 aa23.53■■□□□ 1.36
TOP3A-213ENST00000582230 CRHR2Q13324 411 aa23.53■■□□□ 1.36
TOP3A-213ENST00000582230 TMEM67Q5HYA8 995 aa23.53■■□□□ 1.36
TOP3A-213ENST00000582230 TMTC2Q8N394 836 aa23.53■■□□□ 1.36
TOP3A-213ENST00000582230 IGDCC4Q8TDY8 1250 aa23.53■■□□□ 1.36
TOP3A-213ENST00000582230 GMCL1Q96IK5 515 aa23.53■■□□□ 1.36
TOP3A-213ENST00000582230 ASCC2Q9H1I8 757 aaPredicted RBP23.53■■□□□ 1.36
TOP3A-213ENST00000582230 PTPRFP10586 1907 aa23.53■■□□□ 1.36
TOP3A-213ENST00000582230 CEP350Q5VT06 3117 aa23.52■■□□□ 1.36
TOP3A-213ENST00000582230 WTAPQ15007 396 aa23.52■■□□□ 1.36
TOP3A-213ENST00000582230 BLOC1S2Q6QNY1 142 aa23.52■■□□□ 1.36
TOP3A-213ENST00000582230 TBC1D8O95759 1140 aa23.51■■□□□ 1.35
TOP3A-213ENST00000582230 CYP2C8P10632 490 aa23.51■■□□□ 1.35
TOP3A-213ENST00000582230 SLC1A4P43007 532 aa23.51■■□□□ 1.35
TOP3A-213ENST00000582230 EXOSC10Q01780 885 aaKnown RBP23.51■■□□□ 1.35
TOP3A-213ENST00000582230 FAM83BQ5T0W9 1011 aa23.51■■□□□ 1.35
TOP3A-213ENST00000582230 PNMA1Q8ND90 353 aa23.51■■□□□ 1.35
TOP3A-213ENST00000582230 SMCR8Q8TEV9 937 aaPredicted RBP23.51■■□□□ 1.35
TOP3A-213ENST00000582230 TM6SF1Q9BZW5 370 aa23.51■■□□□ 1.35
TOP3A-213ENST00000582230 TANGO6Q9C0B7 1094 aa23.51■■□□□ 1.35
TOP3A-213ENST00000582230 UPF2Q9HAU5 1272 aaKnown RBP23.51■■□□□ 1.35
TOP3A-213ENST00000582230 TLR2O60603 784 aa23.5■■□□□ 1.35
TOP3A-213ENST00000582230 HSPA1AP0DMV8 641 aaKnown RBP23.5■■□□□ 1.35
TOP3A-213ENST00000582230 HSPA1BP0DMV9 641 aaKnown RBP23.5■■□□□ 1.35
TOP3A-213ENST00000582230 COG2Q14746 738 aa23.5■■□□□ 1.35
TOP3A-213ENST00000582230 GTF3C2Q8WUA4 911 aaPredicted RBP23.5■■□□□ 1.35
TOP3A-213ENST00000582230 DCAF4Q8WV16 495 aa23.5■■□□□ 1.35
TOP3A-213ENST00000582230 HOXC10Q9NYD6 342 aa23.5■■□□□ 1.35
TOP3A-213ENST00000582230 SH2B2O14492 632 aaPredicted RBP23.49■■□□□ 1.35
TOP3A-213ENST00000582230 BMP3P12645 472 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms