RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 TSHZ3Q63HK5 1081 aa26.8■■□□□ 1.88
CASC3-207ENST00000581849 PI4K2BQ8TCG2 481 aa26.8■■□□□ 1.88
CASC3-207ENST00000581849 OSBP2Q969R2 916 aa26.8■■□□□ 1.88
CASC3-207ENST00000581849 HMX1Q9NP08 348 aaPredicted RBP26.8■■□□□ 1.88
CASC3-207ENST00000581849 GSG1L2A8MUP6 293 aa26.79■■□□□ 1.88
CASC3-207ENST00000581849 SIAH1Q8IUQ4 282 aa26.79■■□□□ 1.88
CASC3-207ENST00000581849 APBA2Q99767 749 aa26.79■■□□□ 1.88
CASC3-207ENST00000581849 KANSL2Q9H9L4 492 aa26.79■■□□□ 1.88
CASC3-207ENST00000581849 ROBO3Q96MS0 1386 aa26.79■■□□□ 1.88
CASC3-207ENST00000581849 A0A0G2JMZ2 1700 aa26.79■■□□□ 1.88
CASC3-207ENST00000581849 TFRCP02786 760 aaKnown RBP26.78■■□□□ 1.88
CASC3-207ENST00000581849 ANKLE1Q8NAG6 615 aa26.78■■□□□ 1.88
CASC3-207ENST00000581849 VCPKMTQ9H867 229 aa26.78■■□□□ 1.88
CASC3-207ENST00000581849 CWC22Q9HCG8 908 aaKnown RBP26.78■■□□□ 1.88
CASC3-207ENST00000581849 RLFQ13129 1914 aa26.78■■□□□ 1.88
CASC3-207ENST00000581849 GPAA1O43292 621 aa26.77■■□□□ 1.88
CASC3-207ENST00000581849 ZKSCAN1P17029 563 aaPredicted RBP26.77■■□□□ 1.88
CASC3-207ENST00000581849 MX1P20591 662 aa26.77■■□□□ 1.88
CASC3-207ENST00000581849 HDAC1Q13547 482 aaPredicted RBP26.77■■□□□ 1.88
CASC3-207ENST00000581849 MB21D1Q8N884 522 aa26.77■■□□□ 1.88
CASC3-207ENST00000581849 CRBNQ96SW2 442 aa26.77■■□□□ 1.88
CASC3-207ENST00000581849 BTBD7Q9P203 1132 aa26.77■■□□□ 1.88
CASC3-207ENST00000581849 GREB1LQ9C091 1923 aaPredicted RBP26.77■■□□□ 1.88
CASC3-207ENST00000581849 SALL3Q9BXA9 1300 aa26.76■■□□□ 1.87
CASC3-207ENST00000581849 SLC15A5A6NIM6 579 aa26.76■■□□□ 1.87
CASC3-207ENST00000581849 SMIM22K7EJ46 135 aa26.76■■□□□ 1.87
CASC3-207ENST00000581849 WDR46O15213 610 aaKnown RBP26.76■■□□□ 1.87
CASC3-207ENST00000581849 MAP2K5Q13163 448 aa26.76■■□□□ 1.87
CASC3-207ENST00000581849 TANGO6Q9C0B7 1094 aa26.76■■□□□ 1.87
CASC3-207ENST00000581849 ZBTB47Q9UFB7 747 aaPredicted RBP26.76■■□□□ 1.87
CASC3-207ENST00000581849 PTPREP23469 700 aa26.75■■□□□ 1.87
CASC3-207ENST00000581849 IVNS1ABPQ9Y6Y0 642 aa26.75■■□□□ 1.87
CASC3-207ENST00000581849 CEP290O15078 2479 aa26.74■■□□□ 1.87
CASC3-207ENST00000581849 HOXC6P09630 235 aa26.74■■□□□ 1.87
CASC3-207ENST00000581849 PRKAR2AP13861 404 aaKnown RBP26.74■■□□□ 1.87
CASC3-207ENST00000581849 TRIM32Q13049 653 aa26.74■■□□□ 1.87
CASC3-207ENST00000581849 CLEC10AQ8IUN9 316 aa26.74■■□□□ 1.87
CASC3-207ENST00000581849 SHCBP1Q8NEM2 672 aa26.74■■□□□ 1.87
CASC3-207ENST00000581849 OTUD7AQ8TE49 926 aaPredicted RBP26.74■■□□□ 1.87
CASC3-207ENST00000581849 ZNF287Q9HBT7 754 aa26.74■■□□□ 1.87
CASC3-207ENST00000581849 ZNF236Q9UL36 1845 aa26.74■■□□□ 1.87
CASC3-207ENST00000581849 EEF2P13639 858 aaKnown RBP26.73■■□□□ 1.87
CASC3-207ENST00000581849 DSG3P32926 999 aa26.73■■□□□ 1.87
CASC3-207ENST00000581849 GRB14Q14449 540 aa26.73■■□□□ 1.87
CASC3-207ENST00000581849 KIAA1755Q5JYT7 1200 aa26.73■■□□□ 1.87
CASC3-207ENST00000581849 DPF3Q92784 378 aa26.73■■□□□ 1.87
CASC3-207ENST00000581849 PARP14Q460N5 1801 aa26.73■■□□□ 1.87
CASC3-207ENST00000581849 PATL2C9JE40 543 aaKnown RBP26.72■■□□□ 1.87
CASC3-207ENST00000581849 M0R2C6 588 aa26.72■■□□□ 1.87
CASC3-207ENST00000581849 RASA1P20936 1047 aa26.72■■□□□ 1.87
CASC3-207ENST00000581849 FSD1Q9BTV5 496 aa26.72■■□□□ 1.87
CASC3-207ENST00000581849 EPB41L4AQ9HCS5 686 aaPredicted RBP26.72■■□□□ 1.87
CASC3-207ENST00000581849 GOPCQ9HD26 462 aa26.72■■□□□ 1.87
CASC3-207ENST00000581849 H0YGN5 161 aa26.71■■□□□ 1.87
CASC3-207ENST00000581849 STRNO43815 780 aa26.71■■□□□ 1.87
CASC3-207ENST00000581849 FLOT1O75955 427 aa26.71■■□□□ 1.87
CASC3-207ENST00000581849 TDO2P48775 406 aa26.71■■□□□ 1.87
CASC3-207ENST00000581849 HABP4Q5JVS0 413 aaKnown RBP26.71■■□□□ 1.87
CASC3-207ENST00000581849 WDR78Q5VTH9 848 aa26.71■■□□□ 1.87
CASC3-207ENST00000581849 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.71■■□□□ 1.87
CASC3-207ENST00000581849 MOV10L1Q9BXT6 1211 aaKnown RBP26.71■■□□□ 1.87
CASC3-207ENST00000581849 NACAP1Q9BZK3 213 aa26.71■■□□□ 1.87
CASC3-207ENST00000581849 SPATC1LQ9H0A9 340 aa26.71■■□□□ 1.87
CASC3-207ENST00000581849 MKNK2Q9HBH9 465 aa26.71■■□□□ 1.87
CASC3-207ENST00000581849 OGDHLQ9ULD0 1010 aa26.71■■□□□ 1.87
CASC3-207ENST00000581849 NR2E3Q9Y5X4 410 aa26.71■■□□□ 1.87
CASC3-207ENST00000581849 MINDY4BA8MYZ0 360 aa26.7■■□□□ 1.86
CASC3-207ENST00000581849 CACNB2Q08289 660 aaPredicted RBP26.7■■□□□ 1.86
CASC3-207ENST00000581849 ZMYM1Q5SVZ6 1142 aa26.7■■□□□ 1.86
CASC3-207ENST00000581849 ANKRD45Q5TZF3 282 aa26.7■■□□□ 1.86
CASC3-207ENST00000581849 NECAB2Q7Z6G3 386 aa26.7■■□□□ 1.86
CASC3-207ENST00000581849 SPICE1Q8N0Z3 855 aa26.7■■□□□ 1.86
CASC3-207ENST00000581849 STAP2Q9UGK3 403 aa26.7■■□□□ 1.86
CASC3-207ENST00000581849 CCL14Q16627 93 aa26.69■■□□□ 1.86
CASC3-207ENST00000581849 TICAM2Q86XR7 235 aa26.69■■□□□ 1.86
CASC3-207ENST00000581849 IFNL3Q8IZI9 196 aa26.69■■□□□ 1.86
CASC3-207ENST00000581849 MROH8Q9H579 483 aa26.69■■□□□ 1.86
CASC3-207ENST00000581849 NYAP2Q9P242 653 aa26.69■■□□□ 1.86
CASC3-207ENST00000581849 ADAMTS5Q9UNA0 930 aa26.69■■□□□ 1.86
CASC3-207ENST00000581849 APPP05067 770 aa26.68■■□□□ 1.86
CASC3-207ENST00000581849 MFSD14CQ5VZR4 134 aa26.68■■□□□ 1.86
CASC3-207ENST00000581849 PAWRQ96IZ0 340 aaKnown RBP26.68■■□□□ 1.86
CASC3-207ENST00000581849 SYNPO2Q9UMS6 1093 aa26.68■■□□□ 1.86
CASC3-207ENST00000581849 ATP2B2Q01814 1243 aa26.67■■□□□ 1.86
CASC3-207ENST00000581849 ABRAQ8N0Z2 381 aa26.67■■□□□ 1.86
CASC3-207ENST00000581849 ATG4CQ96DT6 458 aa26.67■■□□□ 1.86
CASC3-207ENST00000581849 YTHDC1Q96MU7 727 aaKnown RBP26.67■■□□□ 1.86
CASC3-207ENST00000581849 ERCC3P19447 782 aa26.66■■□□□ 1.86
CASC3-207ENST00000581849 ZNF444Q8N0Y2 327 aaPredicted RBP26.66■■□□□ 1.86
CASC3-207ENST00000581849 EVI5LQ96CN4 794 aa26.66■■□□□ 1.86
CASC3-207ENST00000581849 SEC62Q99442 399 aaKnown RBP26.66■■□□□ 1.86
CASC3-207ENST00000581849 NBPF3Q9H094 633 aa26.66■■□□□ 1.86
CASC3-207ENST00000581849 IGKV6D-41A0A0C4DH26 115 aa26.65■■□□□ 1.86
CASC3-207ENST00000581849 SLC25A27O95847 323 aa26.65■■□□□ 1.86
CASC3-207ENST00000581849 IGHA2P01877 340 aa26.65■■□□□ 1.86
CASC3-207ENST00000581849 PPP1R9AQ9ULJ8 1098 aa26.65■■□□□ 1.86
CASC3-207ENST00000581849 PLIN4Q96Q06 1357 aa26.65■■□□□ 1.86
CASC3-207ENST00000581849 SLC3A2P08195 630 aaKnown RBP26.64■■□□□ 1.86
CASC3-207ENST00000581849 MNX1P50219 401 aaPredicted RBP26.64■■□□□ 1.86
CASC3-207ENST00000581849 PDE1AP54750 535 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms