RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 ZNF468Q5VIY5 522 aaPredicted RBP7.73□□□□□ -1.17
NF1-221ENST00000581790 ZSCAN25Q6NSZ9 544 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 RUFY3Q7L099 469 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 NLRP8Q86W28 1048 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 SYNE4Q8N205 404 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 LINC00116Q8NCU8 138 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 ZSCAN31Q96LW9 406 aaPredicted RBP7.73□□□□□ -1.17
NF1-221ENST00000581790 MPHOSPH8Q99549 860 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 SLC24A3Q9HC58 644 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 SH2B1Q9NRF2 756 aaPredicted RBP7.73□□□□□ -1.17
NF1-221ENST00000581790 PDRG1Q9NUG6 133 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 LIMCH1Q9UPQ0 1083 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.73□□□□□ -1.17
NF1-221ENST00000581790 MAST2Q6P0Q8 1798 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 AFF2P51816 1311 aa7.73□□□□□ -1.17
NF1-221ENST00000581790 RPAP1Q9BWH6 1393 aaPredicted RBP7.72□□□□□ -1.17
NF1-221ENST00000581790 FAM177BA6PVY3 158 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 RPS6KA4O75676 772 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 PDE8BO95263 885 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 NTSR2O95665 410 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 MYCP01106 439 aaPredicted RBP7.72□□□□□ -1.17
NF1-221ENST00000581790 UQCRFS1P1P0C7P4 283 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 SLC5A1P13866 664 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 ADORA1P30542 326 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 PLA2G4AP47712 749 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 PCBP4P57723 403 aaKnown RBP7.72□□□□□ -1.17
NF1-221ENST00000581790 FKBP4Q02790 459 aaKnown RBP eCLIP7.72□□□□□ -1.17
NF1-221ENST00000581790 TNP2Q05952 138 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 ANKRD1Q15327 319 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 TTF1Q15361 905 aaPredicted RBP7.72□□□□□ -1.17
NF1-221ENST00000581790 PUM3Q15397 648 aaKnown RBP7.72□□□□□ -1.17
NF1-221ENST00000581790 TSGA10IPQ3SY00 556 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 USPL1Q5W0Q7 1092 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 BLOC1S2Q6QNY1 142 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 CLEC17AQ6ZS10 378 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 ZNF589Q86UQ0 364 aaPredicted RBP7.72□□□□□ -1.17
NF1-221ENST00000581790 ZGPATQ8N5A5 531 aaKnown RBP7.72□□□□□ -1.17
NF1-221ENST00000581790 ZNF512BQ96KM6 892 aaPredicted RBP7.72□□□□□ -1.17
NF1-221ENST00000581790 CDC5LQ99459 802 aaKnown RBP7.72□□□□□ -1.17
NF1-221ENST00000581790 DSCC1Q9BVC3 393 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.72□□□□□ -1.17
NF1-221ENST00000581790 NYXQ9GZU5 481 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 NDUFB9Q9Y6M9 179 aa7.72□□□□□ -1.17
NF1-221ENST00000581790 CACNA1SQ13698 1873 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 FAM229AH3BQW9 127 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 HYAL3O43820 417 aaPredicted RBP7.71□□□□□ -1.18
NF1-221ENST00000581790 BAG4O95429 457 aaKnown RBP7.71□□□□□ -1.18
NF1-221ENST00000581790 CYP2E1P05181 493 aaPredicted RBP7.71□□□□□ -1.18
NF1-221ENST00000581790 HCLS1P14317 486 aaPredicted RBP7.71□□□□□ -1.18
NF1-221ENST00000581790 HSPA1LP34931 641 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 RFC5P40937 340 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 ADCK5Q3MIX3 580 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 ILDR2Q71H61 639 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 VGLL2Q8N8G2 317 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 LPIN2Q92539 896 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 ZNF592Q92610 1267 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 ALDH8A1Q9H2A2 487 aaPredicted RBP7.71□□□□□ -1.18
NF1-221ENST00000581790 NARFQ9UHQ1 456 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 CCNL1Q9UK58 526 aaPredicted RBP7.71□□□□□ -1.18
NF1-221ENST00000581790 RTCBQ9Y3I0 505 aaKnown RBP7.71□□□□□ -1.18
NF1-221ENST00000581790 BAZ2AQ9UIF9 1905 aaKnown RBP7.71□□□□□ -1.18
NF1-221ENST00000581790 MYH2Q9UKX2 1941 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 LAMB1P07942 1786 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 ECM29Q5VYK3 1845 aa7.71□□□□□ -1.18
NF1-221ENST00000581790 TNRC6CQ9HCJ0 1690 aaKnown RBP7.7□□□□□ -1.18
NF1-221ENST00000581790 HMGB1P09429 215 aaKnown RBP7.7□□□□□ -1.18
NF1-221ENST00000581790 PDIA4P13667 645 aaKnown RBP7.7□□□□□ -1.18
NF1-221ENST00000581790 RPS6KB1P23443 525 aa7.7□□□□□ -1.18
NF1-221ENST00000581790 HMGB2P26583 209 aaKnown RBP7.7□□□□□ -1.18
NF1-221ENST00000581790 ARID4AP29374 1257 aaPredicted RBP7.7□□□□□ -1.18
NF1-221ENST00000581790 ZAP70P43403 619 aa7.7□□□□□ -1.18
NF1-221ENST00000581790 NR1H3Q13133 447 aa7.7□□□□□ -1.18
NF1-221ENST00000581790 TLR1Q15399 786 aa7.7□□□□□ -1.18
NF1-221ENST00000581790 CCDC129Q6ZRS4 1044 aa7.7□□□□□ -1.18
NF1-221ENST00000581790 C1orf216Q8TAB5 229 aa7.7□□□□□ -1.18
NF1-221ENST00000581790 APPBP2Q92624 585 aa7.7□□□□□ -1.18
NF1-221ENST00000581790 NEK1Q96PY6 1258 aa7.7□□□□□ -1.18
NF1-221ENST00000581790 NACC1Q96RE7 527 aa7.7□□□□□ -1.18
NF1-221ENST00000581790 SEC62Q99442 399 aaKnown RBP7.7□□□□□ -1.18
NF1-221ENST00000581790 SMC3Q9UQE7 1217 aa7.7□□□□□ -1.18
NF1-221ENST00000581790 MAST3O60307 1309 aa7.7□□□□□ -1.18
NF1-221ENST00000581790 WDR33Q9C0J8 1336 aaKnown RBP7.7□□□□□ -1.18
NF1-221ENST00000581790 ELOA3CA0A087WX78 387 aaPredicted RBP7.69□□□□□ -1.18
NF1-221ENST00000581790 ELOA3DA6NLF2 546 aaPredicted RBP7.69□□□□□ -1.18
NF1-221ENST00000581790 KHNYNO15037 678 aaKnown RBP7.69□□□□□ -1.18
NF1-221ENST00000581790 HSPD1P10809 573 aaKnown RBP7.69□□□□□ -1.18
NF1-221ENST00000581790 CPA1P15085 419 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 FGFR2P21802 821 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 MCAMP43121 646 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 SF3B3Q15393 1217 aaKnown RBP7.69□□□□□ -1.18
NF1-221ENST00000581790 WASHC4Q2M389 1173 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 ELOA3BQ3SY89 546 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 CCDC102BQ68D86 513 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 MCTP1Q6DN14 999 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 ANKRD18AQ8IVF6 992 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 ELOA3Q8NG57 546 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 SETDB2Q96T68 719 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 SEC31BQ9NQW1 1179 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 CTNNA3Q9UI47 895 aa7.69□□□□□ -1.18
NF1-221ENST00000581790 CDK5RAP2Q96SN8 1893 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms