RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ZNF552Q9H707 407 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 TLR6Q9Y2C9 796 aa6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 NOTOA8MTQ0 251 aa6.87□□□□□ -1.31
SMCHD1-206ENST00000581631 EFEMP2O95967 443 aa6.87□□□□□ -1.31
SMCHD1-206ENST00000581631 OXR1Q8N573 874 aa6.87□□□□□ -1.31
SMCHD1-206ENST00000581631 PRR36Q9H6K5 1346 aa6.86□□□□□ -1.31
SMCHD1-206ENST00000581631 TEX51A0A1B0GUA7 166 aa6.86□□□□□ -1.31
SMCHD1-206ENST00000581631 SHISA3A0PJX4 238 aa6.86□□□□□ -1.31
SMCHD1-206ENST00000581631 CILPO75339 1184 aa6.86□□□□□ -1.31
SMCHD1-206ENST00000581631 LMNB1P20700 586 aa6.86□□□□□ -1.31
SMCHD1-206ENST00000581631 ZNF605Q86T29 641 aa6.86□□□□□ -1.31
SMCHD1-206ENST00000581631 SLFN12Q8IYM2 578 aa6.86□□□□□ -1.31
SMCHD1-206ENST00000581631 PHC3Q8NDX5 983 aa6.86□□□□□ -1.31
SMCHD1-206ENST00000581631 LINC01599Q8WXQ3 324 aa6.86□□□□□ -1.31
SMCHD1-206ENST00000581631 KCNC2Q96PR1 638 aa6.86□□□□□ -1.31
SMCHD1-206ENST00000581631 KCNH3Q9ULD8 1083 aa6.86□□□□□ -1.31
SMCHD1-206ENST00000581631 A0A0G2JLL6 359 aaPredicted RBP6.85□□□□□ -1.31
SMCHD1-206ENST00000581631 FAM221AA4D161 298 aa6.85□□□□□ -1.31
SMCHD1-206ENST00000581631 LTKP29376 864 aa6.85□□□□□ -1.31
SMCHD1-206ENST00000581631 KCNA1Q09470 495 aa6.85□□□□□ -1.31
SMCHD1-206ENST00000581631 CCDC84Q86UT8 332 aaPredicted RBP6.85□□□□□ -1.31
SMCHD1-206ENST00000581631 FAM13CQ8NE31 585 aa6.85□□□□□ -1.31
SMCHD1-206ENST00000581631 DHX38Q92620 1227 aaKnown RBP6.85□□□□□ -1.31
SMCHD1-206ENST00000581631 VWCEQ96DN2 955 aa6.85□□□□□ -1.31
SMCHD1-206ENST00000581631 DUSP9Q99956 384 aaKnown RBP6.85□□□□□ -1.31
SMCHD1-206ENST00000581631 NOC4LQ9BVI4 516 aaKnown RBP6.85□□□□□ -1.31
SMCHD1-206ENST00000581631 PARD6AQ9NPB6 346 aa6.85□□□□□ -1.31
SMCHD1-206ENST00000581631 PLCG1P19174 1290 aa6.84□□□□□ -1.31
SMCHD1-206ENST00000581631 CHRNEQ04844 493 aa6.84□□□□□ -1.31
SMCHD1-206ENST00000581631 SNX17Q15036 470 aa6.84□□□□□ -1.31
SMCHD1-206ENST00000581631 BNC2Q6ZN30 1099 aaPredicted RBP6.84□□□□□ -1.31
SMCHD1-206ENST00000581631 ANKS4BQ8N8V4 417 aa6.84□□□□□ -1.31
SMCHD1-206ENST00000581631 SUPT5HO00267 1087 aaKnown RBP6.83□□□□□ -1.32
SMCHD1-206ENST00000581631 PSPNO60542 156 aa6.83□□□□□ -1.32
SMCHD1-206ENST00000581631 RLBP1P12271 317 aa6.83□□□□□ -1.32
SMCHD1-206ENST00000581631 ST13P50502 369 aaKnown RBP6.83□□□□□ -1.32
SMCHD1-206ENST00000581631 JARID2Q92833 1246 aaPredicted RBP6.83□□□□□ -1.32
SMCHD1-206ENST00000581631 KREMEN1Q96MU8 473 aa6.83□□□□□ -1.32
SMCHD1-206ENST00000581631 ASPNQ9BXN1 380 aa6.83□□□□□ -1.32
SMCHD1-206ENST00000581631 DNAJA2O60884 412 aa6.82□□□□□ -1.32
SMCHD1-206ENST00000581631 CTSHP09668 335 aa6.82□□□□□ -1.32
SMCHD1-206ENST00000581631 YARSP54577 528 aaKnown RBP6.82□□□□□ -1.32
SMCHD1-206ENST00000581631 SSPNQ14714 243 aa6.82□□□□□ -1.32
SMCHD1-206ENST00000581631 NLRX1Q86UT6 975 aa6.82□□□□□ -1.32
SMCHD1-206ENST00000581631 RHOVQ96L33 236 aa6.82□□□□□ -1.32
SMCHD1-206ENST00000581631 SGPP1Q9BX95 441 aa6.82□□□□□ -1.32
SMCHD1-206ENST00000581631 POLR3KQ9Y2Y1 108 aaPredicted RBP6.82□□□□□ -1.32
SMCHD1-206ENST00000581631 TRIM13O60858 407 aa6.81□□□□□ -1.32
SMCHD1-206ENST00000581631 GALK1P51570 392 aa6.81□□□□□ -1.32
SMCHD1-206ENST00000581631 DUSP4Q13115 394 aa6.81□□□□□ -1.32
SMCHD1-206ENST00000581631 SPPL2CQ8IUH8 684 aa6.81□□□□□ -1.32
SMCHD1-206ENST00000581631 MARCH10Q8NA82 808 aaPredicted RBP6.81□□□□□ -1.32
SMCHD1-206ENST00000581631 RELTQ969Z4 430 aa6.81□□□□□ -1.32
SMCHD1-206ENST00000581631 MBD1Q9UIS9 605 aaPredicted RBP6.81□□□□□ -1.32
SMCHD1-206ENST00000581631 GPR160Q9UJ42 338 aa6.81□□□□□ -1.32
SMCHD1-206ENST00000581631 CNOT6Q9ULM6 557 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-206ENST00000581631 KCTD3Q9Y597 815 aa6.81□□□□□ -1.32
SMCHD1-206ENST00000581631 USP31Q70CQ4 1352 aa6.81□□□□□ -1.32
SMCHD1-206ENST00000581631 CHURC1-FNTBB4DL54 471 aa6.8□□□□□ -1.32
SMCHD1-206ENST00000581631 HRKO00198 91 aa6.8□□□□□ -1.32
SMCHD1-206ENST00000581631 F13A1P00488 732 aa6.8□□□□□ -1.32
SMCHD1-206ENST00000581631 LMNB2Q03252 620 aa6.8□□□□□ -1.32
SMCHD1-206ENST00000581631 GATAD2BQ8WXI9 593 aa6.8□□□□□ -1.32
SMCHD1-206ENST00000581631 HDAC8Q9BY41 377 aa6.8□□□□□ -1.32
SMCHD1-206ENST00000581631 REV1Q9UBZ9 1251 aa6.8□□□□□ -1.32
SMCHD1-206ENST00000581631 JAG2Q9Y219 1238 aa6.8□□□□□ -1.32
SMCHD1-206ENST00000581631 BMP7P18075 431 aa6.79□□□□□ -1.32
SMCHD1-206ENST00000581631 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
SMCHD1-206ENST00000581631 DAB2P98082 770 aa6.79□□□□□ -1.32
SMCHD1-206ENST00000581631 CAMK2GQ13555 558 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-206ENST00000581631 TAF1CQ15572 869 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-206ENST00000581631 PDE6BP35913 854 aa6.78□□□□□ -1.32
SMCHD1-206ENST00000581631 ZNF385BQ569K4 471 aa6.78□□□□□ -1.32
SMCHD1-206ENST00000581631 TCERG1LQ5VWI1 586 aa6.78□□□□□ -1.32
SMCHD1-206ENST00000581631 USHBP1Q8N6Y0 703 aa6.78□□□□□ -1.32
SMCHD1-206ENST00000581631 CCDC74BQ96LY2 380 aa6.78□□□□□ -1.32
SMCHD1-206ENST00000581631 ZCCHC4Q9H5U6 513 aa6.78□□□□□ -1.32
SMCHD1-206ENST00000581631 EPB41L4AQ9HCS5 686 aaPredicted RBP6.78□□□□□ -1.32
SMCHD1-206ENST00000581631 RTEL1Q9NZ71 1219 aa6.78□□□□□ -1.32
SMCHD1-206ENST00000581631 TMEM82A0PJX8 343 aa6.77□□□□□ -1.33
SMCHD1-206ENST00000581631 NRDCO43847 1150 aa6.77□□□□□ -1.33
SMCHD1-206ENST00000581631 FOXD2O60548 495 aaPredicted RBP6.77□□□□□ -1.33
SMCHD1-206ENST00000581631 HTR3BO95264 441 aa6.77□□□□□ -1.33
SMCHD1-206ENST00000581631 PF4P02776 101 aa6.77□□□□□ -1.33
SMCHD1-206ENST00000581631 RNF111Q6ZNA4 994 aa6.77□□□□□ -1.33
SMCHD1-206ENST00000581631 ENOX1Q8TC92 643 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-206ENST00000581631 SYTL5Q8TDW5 730 aaPredicted RBP6.77□□□□□ -1.33
SMCHD1-206ENST00000581631 XYLT2Q9H1B5 865 aa6.77□□□□□ -1.33
SMCHD1-206ENST00000581631 PARP2Q9UGN5 583 aa6.77□□□□□ -1.33
SMCHD1-206ENST00000581631 OR14I1A6ND48 311 aa6.76□□□□□ -1.33
SMCHD1-206ENST00000581631 USP2O75604 605 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-206ENST00000581631 BPNT1O95861 308 aa6.76□□□□□ -1.33
SMCHD1-206ENST00000581631 GARTP22102 1010 aa6.76□□□□□ -1.33
SMCHD1-206ENST00000581631 EAPPQ56P03 285 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-206ENST00000581631 PANK1Q8TE04 598 aa6.76□□□□□ -1.33
SMCHD1-206ENST00000581631 DACT3Q96B18 629 aaPredicted RBP6.76□□□□□ -1.33
SMCHD1-206ENST00000581631 MAP6Q96JE9 813 aa6.76□□□□□ -1.33
SMCHD1-206ENST00000581631 KRTAP17-1Q9BYP8 105 aa6.76□□□□□ -1.33
SMCHD1-206ENST00000581631 CRTAC1Q9NQ79 661 aa6.76□□□□□ -1.33
SMCHD1-206ENST00000581631 KLHL3Q9UH77 587 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms