RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 IFNL1Q8IU54 200 aa18.78■□□□□ 0.6
CCDC57-213ENST00000581625 RASEFQ8IZ41 740 aa18.78■□□□□ 0.6
CCDC57-213ENST00000581625 NEK1Q96PY6 1258 aa18.78■□□□□ 0.6
CCDC57-213ENST00000581625 ZSCAN10Q96SZ4 725 aaPredicted RBP18.78■□□□□ 0.6
CCDC57-213ENST00000581625 WDR19Q8NEZ3 1342 aa18.77■□□□□ 0.6
CCDC57-213ENST00000581625 BTBD19C9JJ37 291 aa18.77■□□□□ 0.6
CCDC57-213ENST00000581625 IGF2BP3O00425 579 aaKnown RBP eCLIP18.77■□□□□ 0.6
CCDC57-213ENST00000581625 TOP1P11387 765 aaKnown RBP18.77■□□□□ 0.6
CCDC57-213ENST00000581625 ANAPC15P60006 121 aa18.77■□□□□ 0.6
CCDC57-213ENST00000581625 CYB5R4Q7L1T6 521 aa18.77■□□□□ 0.6
CCDC57-213ENST00000581625 GMCL1P1Q8NEA9 526 aa18.77■□□□□ 0.6
CCDC57-213ENST00000581625 UPF2Q9HAU5 1272 aaKnown RBP18.77■□□□□ 0.6
CCDC57-213ENST00000581625 EMILIN3Q9NT22 766 aa18.77■□□□□ 0.6
CCDC57-213ENST00000581625 MYH4Q9Y623 1939 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 WDR46O15213 610 aaKnown RBP18.76■□□□□ 0.59
CCDC57-213ENST00000581625 CA12O43570 354 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 SEC24BO95487 1268 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 VCAM1P19320 739 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 PSMA5P28066 241 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 ENAHQ8N8S7 591 aaPredicted RBP18.76■□□□□ 0.59
CCDC57-213ENST00000581625 NKX2-3Q8TAU0 364 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 TMEM87BQ96K49 555 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 PTPN18Q99952 460 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 ZKSCAN3Q9BRR0 538 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 BEGAINQ9BUH8 593 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 SAGE1Q9NXZ1 904 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 PNMA3Q9UL41 463 aa18.76■□□□□ 0.59
CCDC57-213ENST00000581625 PRC1O43663 620 aa18.75■□□□□ 0.59
CCDC57-213ENST00000581625 ADCK5Q3MIX3 580 aa18.75■□□□□ 0.59
CCDC57-213ENST00000581625 IFIT1BQ5T764 474 aaKnown RBP18.75■□□□□ 0.59
CCDC57-213ENST00000581625 RCSD1Q6JBY9 416 aa18.75■□□□□ 0.59
CCDC57-213ENST00000581625 GPAT2Q6NUI2 795 aa18.75■□□□□ 0.59
CCDC57-213ENST00000581625 LRRC47Q8N1G4 583 aaKnown RBP18.75■□□□□ 0.59
CCDC57-213ENST00000581625 FAM43AQ8N2R8 423 aa18.75■□□□□ 0.59
CCDC57-213ENST00000581625 ANKS1AQ92625 1134 aa18.75■□□□□ 0.59
CCDC57-213ENST00000581625 JAKMIP1Q96N16 626 aaKnown RBP18.75■□□□□ 0.59
CCDC57-213ENST00000581625 F5H6K3 240 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 PDHXO00330 501 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 IFIT3O14879 490 aaKnown RBP18.74■□□□□ 0.59
CCDC57-213ENST00000581625 HOXA7P31268 230 aaPredicted RBP18.74■□□□□ 0.59
CCDC57-213ENST00000581625 ANTXR2P58335 489 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 KLRC3Q07444 240 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 DGKZQ13574 1117 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 SEC23AQ15436 765 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 TREML2Q5T2D2 321 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 DHX32Q7L7V1 743 aaKnown RBP18.74■□□□□ 0.59
CCDC57-213ENST00000581625 IL17RAQ96F46 866 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 GMCL1Q96IK5 515 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 PARK7Q99497 189 aaKnown RBP18.74■□□□□ 0.59
CCDC57-213ENST00000581625 TMEM47Q9BQJ4 181 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 CFHR5Q9BXR6 569 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 TM6SF1Q9BZW5 370 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 KAT14Q9H8E8 782 aa18.74■□□□□ 0.59
CCDC57-213ENST00000581625 NDUFB10O96000 172 aa18.73■□□□□ 0.59
CCDC57-213ENST00000581625 WTAPQ15007 396 aa18.73■□□□□ 0.59
CCDC57-213ENST00000581625 TMEM67Q5HYA8 995 aa18.73■□□□□ 0.59
CCDC57-213ENST00000581625 BLOC1S2Q6QNY1 142 aa18.73■□□□□ 0.59
CCDC57-213ENST00000581625 WBP1LQ9NX94 342 aa18.73■□□□□ 0.59
CCDC57-213ENST00000581625 USP17L15C9J2P7 530 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 USP17L13C9JLJ4 530 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 USP17L11C9JVI0 530 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 USP17L18D6R9N7 530 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 USP17L22D6RA61 530 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 USP17L17D6RBQ6 530 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 USP17L19D6RCP7 530 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 USP17L20D6RJB6 530 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 RAD21O60216 631 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 OSBPP22059 807 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 IRX3P78415 501 aaPredicted RBP18.72■□□□□ 0.59
CCDC57-213ENST00000581625 USP17L24Q0WX57 530 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 TAF1CQ15572 869 aaPredicted RBP18.72■□□□□ 0.59
CCDC57-213ENST00000581625 SPICE1Q8N0Z3 855 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 TMTC2Q8N394 836 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 PNMA1Q8ND90 353 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 RPAP3Q9H6T3 665 aaPredicted RBP18.72■□□□□ 0.59
CCDC57-213ENST00000581625 RNF186Q9NXI6 227 aa18.72■□□□□ 0.59
CCDC57-213ENST00000581625 SH2B2O14492 632 aaPredicted RBP18.71■□□□□ 0.59
CCDC57-213ENST00000581625 CASTP20810 708 aaKnown RBP18.71■□□□□ 0.59
CCDC57-213ENST00000581625 LIFRP42702 1097 aa18.71■□□□□ 0.59
CCDC57-213ENST00000581625 SLFN13Q68D06 897 aa18.71■□□□□ 0.59
CCDC57-213ENST00000581625 CHST3Q7LGC8 479 aa18.71■□□□□ 0.59
CCDC57-213ENST00000581625 IGDCC4Q8TDY8 1250 aa18.71■□□□□ 0.59
CCDC57-213ENST00000581625 GTF3C2Q8WUA4 911 aaPredicted RBP18.71■□□□□ 0.59
CCDC57-213ENST00000581625 DCAF4Q8WV16 495 aa18.71■□□□□ 0.59
CCDC57-213ENST00000581625 BACH2Q9BYV9 841 aa18.71■□□□□ 0.59
CCDC57-213ENST00000581625 TANGO6Q9C0B7 1094 aa18.71■□□□□ 0.59
CCDC57-213ENST00000581625 ZFYVE28Q9HCC9 887 aa18.71■□□□□ 0.59
CCDC57-213ENST00000581625 MYPNQ86TC9 1320 aa18.71■□□□□ 0.59
CCDC57-213ENST00000581625 RPS6KB1P23443 525 aa18.7■□□□□ 0.58
CCDC57-213ENST00000581625 SLC1A4P43007 532 aa18.7■□□□□ 0.58
CCDC57-213ENST00000581625 EXOSC10Q01780 885 aaKnown RBP18.7■□□□□ 0.58
CCDC57-213ENST00000581625 KIAA1755Q5JYT7 1200 aa18.7■□□□□ 0.58
CCDC57-213ENST00000581625 CATSPERGQ6ZRH7 1159 aa18.7■□□□□ 0.58
CCDC57-213ENST00000581625 SMCR8Q8TEV9 937 aaPredicted RBP18.7■□□□□ 0.58
CCDC57-213ENST00000581625 C22orf23Q9BZE7 217 aa18.7■□□□□ 0.58
CCDC57-213ENST00000581625 ASCC2Q9H1I8 757 aaPredicted RBP18.7■□□□□ 0.58
CCDC57-213ENST00000581625 LY9Q9HBG7 655 aa18.7■□□□□ 0.58
CCDC57-213ENST00000581625 ZSWIM6Q9HCJ5 1215 aa18.7■□□□□ 0.58
CCDC57-213ENST00000581625 CYP46A1Q9Y6A2 500 aa18.7■□□□□ 0.58
CCDC57-213ENST00000581625 SNHG28P0DPA3 235 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms