RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 SEC62Q99442 399 aaKnown RBP11.7□□□□□ -0.54
TOP3A-211ENST00000581536 ADAM33Q9BZ11 813 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 ZBTB21Q9ULJ3 1066 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 AGTPBP1Q9UPW5 1226 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 PTCH2Q9Y6C5 1203 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 SLC4A4Q9Y6R1 1079 aa11.7□□□□□ -0.54
TOP3A-211ENST00000581536 SALL3Q9BXA9 1300 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 USP17L12C9JPN9 530 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 USP17L21D6R901 530 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 FMNL1O95466 1100 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-211ENST00000581536 BACE1P56817 501 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 HDAC1Q13547 482 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-211ENST00000581536 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 ZYXQ15942 572 aaKnown RBP11.69□□□□□ -0.54
TOP3A-211ENST00000581536 ABCB5Q2M3G0 1257 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 SH3D19Q5HYK7 790 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 STK11IPQ8N1F8 1099 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 ANKRD13CQ8N6S4 541 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 KBTBD3Q8NAB2 608 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-211ENST00000581536 ACER1Q8TDN7 264 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 STRBPQ96SI9 672 aaKnown RBP11.69□□□□□ -0.54
TOP3A-211ENST00000581536 PARK7Q99497 189 aaKnown RBP11.69□□□□□ -0.54
TOP3A-211ENST00000581536 EHD4Q9H223 541 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 AS3MTQ9HBK9 375 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 GABRQQ9UN88 632 aa11.69□□□□□ -0.54
TOP3A-211ENST00000581536 USP17L10C9JJH3 530 aa11.68□□□□□ -0.54
TOP3A-211ENST00000581536 M0R2C6 588 aa11.68□□□□□ -0.54
TOP3A-211ENST00000581536 RNF113AO15541 343 aaKnown RBP11.68□□□□□ -0.54
TOP3A-211ENST00000581536 MYCP01106 439 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-211ENST00000581536 PTPREP23469 700 aa11.68□□□□□ -0.54
TOP3A-211ENST00000581536 KIF22Q14807 665 aa11.68□□□□□ -0.54
TOP3A-211ENST00000581536 SEPT2Q15019 361 aa11.68□□□□□ -0.54
TOP3A-211ENST00000581536 ZSCAN25Q6NSZ9 544 aa11.68□□□□□ -0.54
TOP3A-211ENST00000581536 CTR9Q6PD62 1173 aa11.68□□□□□ -0.54
TOP3A-211ENST00000581536 GPATCH3Q96I76 525 aa11.68□□□□□ -0.54
TOP3A-211ENST00000581536 P2RX7Q99572 595 aaKnown RBP11.68□□□□□ -0.54
TOP3A-211ENST00000581536 TBC1D2Q9BYX2 928 aa11.68□□□□□ -0.54
TOP3A-211ENST00000581536 ASCC2Q9H1I8 757 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-211ENST00000581536 ATP8A2Q9NTI2 1148 aa11.68□□□□□ -0.54
TOP3A-211ENST00000581536 SLC45A1Q9Y2W3 748 aa11.68□□□□□ -0.54
TOP3A-211ENST00000581536 TTC41PQ6P2S7 1318 aa11.67□□□□□ -0.54
TOP3A-211ENST00000581536 GSG1L2A8MUP6 293 aa11.67□□□□□ -0.54
TOP3A-211ENST00000581536 MX1P20591 662 aa11.67□□□□□ -0.54
TOP3A-211ENST00000581536 MLLT1Q03111 559 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-211ENST00000581536 C12orf60Q5U649 245 aa11.67□□□□□ -0.54
TOP3A-211ENST00000581536 POTEEQ6S8J3 1075 aa11.67□□□□□ -0.54
TOP3A-211ENST00000581536 SIAH1Q8IUQ4 282 aa11.67□□□□□ -0.54
TOP3A-211ENST00000581536 SH3TC2Q8TF17 1288 aa11.67□□□□□ -0.54
TOP3A-211ENST00000581536 GCC1Q96CN9 775 aa11.67□□□□□ -0.54
TOP3A-211ENST00000581536 LNPKQ9C0E8 428 aa11.67□□□□□ -0.54
TOP3A-211ENST00000581536 KIAA0100Q14667 2235 aaKnown RBP11.67□□□□□ -0.54
TOP3A-211ENST00000581536 PLXNB2O15031 1838 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 A0A1W2PRG0 241 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 C19orf81C9J6K1 198 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 TULP1O00294 542 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-211ENST00000581536 MPHOSPH10O00566 681 aaKnown RBP11.66□□□□□ -0.54
TOP3A-211ENST00000581536 GLRX3O76003 335 aaKnown RBP11.66□□□□□ -0.54
TOP3A-211ENST00000581536 AKR1B1P15121 316 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 CDK8P49336 464 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 ARHGEF6Q15052 776 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 Q3C1V9 767 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 USP17L2Q6R6M4 530 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 SMCR8Q8TEV9 937 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-211ENST00000581536 RWDD1Q9H446 243 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-211ENST00000581536 CABP5Q9NP86 173 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 GINM1Q9NU53 330 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 TMOD4Q9NZQ9 345 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 SRRDQ9UH36 339 aa11.66□□□□□ -0.54
TOP3A-211ENST00000581536 ZNFX1Q9P2E3 1918 aaKnown RBP11.65□□□□□ -0.54
TOP3A-211ENST00000581536 MINDY4BA8MYZ0 360 aa11.65□□□□□ -0.54
TOP3A-211ENST00000581536 ERC2O15083 957 aa11.65□□□□□ -0.54
TOP3A-211ENST00000581536 EN2P19622 333 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-211ENST00000581536 HOXA7P31268 230 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-211ENST00000581536 PDE1AP54750 535 aa11.65□□□□□ -0.54
TOP3A-211ENST00000581536 PRKCZQ05513 592 aa11.65□□□□□ -0.54
TOP3A-211ENST00000581536 KIAA1755Q5JYT7 1200 aa11.65□□□□□ -0.54
TOP3A-211ENST00000581536 CLEC10AQ8IUN9 316 aa11.65□□□□□ -0.54
TOP3A-211ENST00000581536 SMC5Q8IY18 1101 aa11.65□□□□□ -0.54
TOP3A-211ENST00000581536 APPBP2Q92624 585 aa11.65□□□□□ -0.54
TOP3A-211ENST00000581536 ARMC5Q96C12 935 aa11.65□□□□□ -0.54
TOP3A-211ENST00000581536 TXNRD2Q9NNW7 524 aa11.65□□□□□ -0.54
TOP3A-211ENST00000581536 STAP2Q9UGK3 403 aa11.65□□□□□ -0.54
TOP3A-211ENST00000581536 RLFQ13129 1914 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 MYPNQ86TC9 1320 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 PATL2C9JE40 543 aaKnown RBP11.64□□□□□ -0.55
TOP3A-211ENST00000581536 GPAA1O43292 621 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 MAP3K7O43318 606 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 PABPC4Q13310 644 aaKnown RBP eCLIP11.64□□□□□ -0.55
TOP3A-211ENST00000581536 MTFR1Q15390 333 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 SLC9C1Q4G0N8 1177 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 ZMYM1Q5SVZ6 1142 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 CCDC129Q6ZRS4 1044 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 C16orf86Q6ZW13 317 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 ZNF333Q96JL9 665 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 KCNK17Q96T54 332 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 FSD1Q9BTV5 496 aa11.64□□□□□ -0.55
TOP3A-211ENST00000581536 EPB41L4AQ9HCS5 686 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-211ENST00000581536 RBPJLQ9UBG7 517 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms