RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 DIEXFQ68CQ4 756 aaKnown RBP12.83□□□□□ -0.36
RFFL-209ENST00000581265 RPAP3Q9H6T3 665 aaPredicted RBP12.83□□□□□ -0.36
RFFL-209ENST00000581265 CWC22Q9HCG8 908 aaKnown RBP12.83□□□□□ -0.36
RFFL-209ENST00000581265 DDX19BQ9UMR2 479 aa12.83□□□□□ -0.36
RFFL-209ENST00000581265 ALPK3Q96L96 1907 aa12.82□□□□□ -0.36
RFFL-209ENST00000581265 A0A1W2PRG0 241 aa12.82□□□□□ -0.36
RFFL-209ENST00000581265 APBB1O00213 710 aa12.82□□□□□ -0.36
RFFL-209ENST00000581265 IGHA2P01877 340 aa12.82□□□□□ -0.36
RFFL-209ENST00000581265 EVX2Q03828 476 aa12.82□□□□□ -0.36
RFFL-209ENST00000581265 GRB14Q14449 540 aa12.82□□□□□ -0.36
RFFL-209ENST00000581265 LCORLQ8N3X6 602 aa12.82□□□□□ -0.36
RFFL-209ENST00000581265 SDR42E1Q8WUS8 393 aa12.82□□□□□ -0.36
RFFL-209ENST00000581265 DNAJC2Q99543 621 aaKnown RBP12.82□□□□□ -0.36
RFFL-209ENST00000581265 CDX2Q99626 313 aaPredicted RBP12.82□□□□□ -0.36
RFFL-209ENST00000581265 FLRT1Q9NZU1 646 aa12.82□□□□□ -0.36
RFFL-209ENST00000581265 SWAP70Q9UH65 585 aa12.82□□□□□ -0.36
RFFL-209ENST00000581265 IVNS1ABPQ9Y6Y0 642 aa12.82□□□□□ -0.36
RFFL-209ENST00000581265 MPHOSPH10O00566 681 aaKnown RBP12.81□□□□□ -0.36
RFFL-209ENST00000581265 STRNO43815 780 aa12.81□□□□□ -0.36
RFFL-209ENST00000581265 ATP5JP18859 108 aa12.81□□□□□ -0.36
RFFL-209ENST00000581265 ADD2P35612 726 aa12.81□□□□□ -0.36
RFFL-209ENST00000581265 ATP2B2Q01814 1243 aa12.81□□□□□ -0.36
RFFL-209ENST00000581265 WDR78Q5VTH9 848 aa12.81□□□□□ -0.36
RFFL-209ENST00000581265 TMEM179Q6ZVK1 233 aa12.81□□□□□ -0.36
RFFL-209ENST00000581265 SIAH1Q8IUQ4 282 aa12.81□□□□□ -0.36
RFFL-209ENST00000581265 FAM122AQ96E09 287 aa12.81□□□□□ -0.36
RFFL-209ENST00000581265 CHMP4BQ9H444 224 aaKnown RBP12.81□□□□□ -0.36
RFFL-209ENST00000581265 ATP8A2Q9NTI2 1148 aa12.81□□□□□ -0.36
RFFL-209ENST00000581265 PAG1Q9NWQ8 432 aa12.81□□□□□ -0.36
RFFL-209ENST00000581265 COG6Q9Y2V7 657 aa12.81□□□□□ -0.36
RFFL-209ENST00000581265 MSCO60682 206 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 CYP2D6P10635 497 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 MB21D1Q8N884 522 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 SLC44A5Q8NCS7 719 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 SHCBP1Q8NEM2 672 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 NPLOC4Q8TAT6 608 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 LPAR1Q92633 364 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 HAUS7Q99871 368 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 MOV10L1Q9BXT6 1211 aaKnown RBP12.8□□□□□ -0.36
RFFL-209ENST00000581265 BOLA2Q9H3K6 86 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 ARMT1Q9H993 441 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 DDX20Q9UHI6 824 aaKnown RBP12.8□□□□□ -0.36
RFFL-209ENST00000581265 TMX2Q9Y320 296 aa12.8□□□□□ -0.36
RFFL-209ENST00000581265 DDX60LQ5H9U9 1706 aaKnown RBP12.79□□□□□ -0.36
RFFL-209ENST00000581265 TNFRSF10AO00220 468 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 PRKAB2O43741 272 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 DSG3P32926 999 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 CYP2C19P33261 490 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 UBE3CQ15386 1083 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 LRRC26Q2I0M4 334 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 KIAA1755Q5JYT7 1200 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 C12orf60Q5U649 245 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 OLFML2BQ68BL8 750 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 DPP9Q86TI2 863 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 DYNLL2Q96FJ2 89 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 TANGO6Q9C0B7 1094 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.79□□□□□ -0.36
RFFL-209ENST00000581265 SPATC1LQ9H0A9 340 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 PRKAG2Q9UGJ0 569 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 LAMA3Q16787 3333 aa12.79□□□□□ -0.36
RFFL-209ENST00000581265 USP17L12C9JPN9 530 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 USP17L21D6R901 530 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 MBD4O95243 580 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 ERCC3P19447 782 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 ADORA2AP29274 412 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 SLFNL1Q499Z3 407 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 ABRAQ8N0Z2 381 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 TRPV1Q8NER1 839 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 MYLIPQ8WY64 445 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 MROH8Q9H579 483 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 SH2D4AQ9H788 454 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 ARHGEF10LQ9HCE6 1279 aa12.78□□□□□ -0.36
RFFL-209ENST00000581265 TMEM265A0A087WTH1 108 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 DNM1LO00429 736 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 CYBAP13498 195 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 AKR1B1P15121 316 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 FOSL2P15408 326 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 CNGA1P29973 690 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 CDK8P49336 464 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 SENP6Q9GZR1 1112 aaPredicted RBP12.77□□□□□ -0.37
RFFL-209ENST00000581265 BCL11AQ9H165 835 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 SEMA6BQ9H3T3 888 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 VCPKMTQ9H867 229 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 SLC5A4Q9NY91 659 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 RAPGEFL1Q9UHV5 662 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 ADAMTS5Q9UNA0 930 aa12.77□□□□□ -0.37
RFFL-209ENST00000581265 CYP2D7A0A087X1C5 515 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 SMIM22K7EJ46 135 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 COBLO75128 1261 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 FLOT1O75955 427 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 PLA2G5P39877 138 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 ICA1Q05084 483 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 TJAP1Q5JTD0 557 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 ZSCAN25Q6NSZ9 544 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 C16orf86Q6ZW13 317 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 AMOTL1Q8IY63 956 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 SPICE1Q8N0Z3 855 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 ARRDC4Q8NCT1 418 aa12.76□□□□□ -0.37
RFFL-209ENST00000581265 ATG4CQ96DT6 458 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms