RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 GH2P01242 217 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 HLA-DOAP06340 250 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 CLTBP09497 229 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 CT47B1P0C2W7 299 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-210ENST00000580713 MAP3K12Q12852 859 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 SNX17Q15036 470 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 LRRC41Q15345 812 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 CATSPERGQ6ZRH7 1159 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 ADAMTS19Q8TE59 1207 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 SSH1Q8WYL5 1049 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 TIFAQ96CG3 184 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 ASB2Q96Q27 587 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 COPRSQ9NQ92 184 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 BTBD7Q9P203 1132 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 THEGQ9P2T0 379 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 HDAC5Q9UQL6 1122 aa13.15□□□□□ -0.3
TOP3A-210ENST00000580713 RLFQ13129 1914 aa13.14□□□□□ -0.31
TOP3A-210ENST00000580713 ITGB8P26012 769 aa13.14□□□□□ -0.31
TOP3A-210ENST00000580713 ADORA2AP29274 412 aa13.14□□□□□ -0.31
TOP3A-210ENST00000580713 USP14P54578 494 aa13.14□□□□□ -0.31
TOP3A-210ENST00000580713 FPGSQ05932 587 aa13.14□□□□□ -0.31
TOP3A-210ENST00000580713 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
TOP3A-210ENST00000580713 PRAMEF19Q5SWL8 479 aa13.14□□□□□ -0.31
TOP3A-210ENST00000580713 OLFML2BQ68BL8 750 aa13.14□□□□□ -0.31
TOP3A-210ENST00000580713 NAA16Q6N069 864 aaPredicted RBP13.14□□□□□ -0.31
TOP3A-210ENST00000580713 CCDC129Q6ZRS4 1044 aa13.14□□□□□ -0.31
TOP3A-210ENST00000580713 C12orf42Q96LP6 360 aa13.14□□□□□ -0.31
TOP3A-210ENST00000580713 UHRF1Q96T88 793 aaPredicted RBP13.14□□□□□ -0.31
TOP3A-210ENST00000580713 SUPT16HQ9Y5B9 1047 aaKnown RBP13.14□□□□□ -0.31
TOP3A-210ENST00000580713 FLT1P17948 1338 aa13.13□□□□□ -0.31
TOP3A-210ENST00000580713 PQBP1O60828 265 aaKnown RBP13.13□□□□□ -0.31
TOP3A-210ENST00000580713 CHRM1P11229 460 aaPredicted RBP13.13□□□□□ -0.31
TOP3A-210ENST00000580713 MRPS5P82675 430 aaKnown RBP13.13□□□□□ -0.31
TOP3A-210ENST00000580713 CCDC85BQ15834 202 aaPredicted RBP13.13□□□□□ -0.31
TOP3A-210ENST00000580713 FAM47AQ5JRC9 791 aa13.13□□□□□ -0.31
TOP3A-210ENST00000580713 METTL16Q86W50 562 aaKnown RBP13.13□□□□□ -0.31
TOP3A-210ENST00000580713 TMEM39AQ9NV64 488 aa13.13□□□□□ -0.31
TOP3A-210ENST00000580713 SLC5A4Q9NY91 659 aa13.13□□□□□ -0.31
TOP3A-210ENST00000580713 SPDYE16A6NNV3 312 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-210ENST00000580713 STRNO43815 780 aa13.12□□□□□ -0.31
TOP3A-210ENST00000580713 VCAM1P19320 739 aa13.12□□□□□ -0.31
TOP3A-210ENST00000580713 C1orf53Q5VUE5 145 aa13.12□□□□□ -0.31
TOP3A-210ENST00000580713 PRDM12Q9H4Q4 367 aa13.12□□□□□ -0.31
TOP3A-210ENST00000580713 RPAP3Q9H6T3 665 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-210ENST00000580713 MYO9BQ13459 2157 aa13.12□□□□□ -0.31
TOP3A-210ENST00000580713 KIAA0355O15063 1070 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 IGFBP4P22692 258 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 ARID4AP29374 1257 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-210ENST00000580713 MCAMP43121 646 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 CLCN6P51797 869 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 AKNAD1Q5T1N1 836 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 LBX2Q6XYB7 198 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 ACER1Q8TDN7 264 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 MOV10L1Q9BXT6 1211 aaKnown RBP13.11□□□□□ -0.31
TOP3A-210ENST00000580713 KIAA1683Q9H0B3 1180 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 XPNPEP3Q9NQH7 507 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 SNRKQ9NRH2 765 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 PHF24Q9UPV7 400 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 CDH23Q9H251 3354 aa13.11□□□□□ -0.31
TOP3A-210ENST00000580713 SRGAP3O43295 1099 aa13.1□□□□□ -0.31
TOP3A-210ENST00000580713 COBLO75128 1261 aa13.1□□□□□ -0.31
TOP3A-210ENST00000580713 IGHA2P01877 340 aa13.1□□□□□ -0.31
TOP3A-210ENST00000580713 RARBP10826 455 aa13.1□□□□□ -0.31
TOP3A-210ENST00000580713 PPP4CP60510 307 aa13.1□□□□□ -0.31
TOP3A-210ENST00000580713 PLS1Q14651 629 aa13.1□□□□□ -0.31
TOP3A-210ENST00000580713 RNF180Q86T96 592 aa13.1□□□□□ -0.31
TOP3A-210ENST00000580713 CABP5Q9NP86 173 aa13.1□□□□□ -0.31
TOP3A-210ENST00000580713 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
TOP3A-210ENST00000580713 SIPA1L1O43166 1804 aa13.1□□□□□ -0.31
TOP3A-210ENST00000580713 NCOR1O75376 2440 aa13.1□□□□□ -0.31
TOP3A-210ENST00000580713 DCDC2CA8MYV0 355 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 PGK1P00558 417 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 ERCC3P19447 782 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 PBX2P40425 430 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 RARSP54136 660 aaKnown RBP13.09□□□□□ -0.31
TOP3A-210ENST00000580713 ABCB5Q2M3G0 1257 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 CERKLQ49MI3 558 aaPredicted RBP13.09□□□□□ -0.31
TOP3A-210ENST00000580713 NCAPG2Q86XI2 1143 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 SLC44A5Q8NCS7 719 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 KIF12Q96FN5 646 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.09□□□□□ -0.311e-7■■■■□ 21.2
TOP3A-210ENST00000580713 C1QTNF1Q9BXJ1 281 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 TANGO6Q9C0B7 1094 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 SPATC1LQ9H0A9 340 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 HOXC10Q9NYD6 342 aa13.09□□□□□ -0.31
TOP3A-210ENST00000580713 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.09□□□□□ -0.31
TOP3A-210ENST00000580713 A0A1W2PQ45 241 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-210ENST00000580713 A0A1W2PQY0 241 aa13.08□□□□□ -0.32
TOP3A-210ENST00000580713 GRXCR1A8MXD5 290 aa13.08□□□□□ -0.32
TOP3A-210ENST00000580713 NEFLP07196 543 aa13.08□□□□□ -0.32
TOP3A-210ENST00000580713 USP5P45974 858 aa13.08□□□□□ -0.32
TOP3A-210ENST00000580713 RRP1P56182 461 aaKnown RBP13.08□□□□□ -0.32
TOP3A-210ENST00000580713 DYNLL1P63167 89 aaKnown RBP13.08□□□□□ -0.32
TOP3A-210ENST00000580713 COG2Q14746 738 aa13.08□□□□□ -0.32
TOP3A-210ENST00000580713 TTC39AQ5SRH9 613 aa13.08□□□□□ -0.32
TOP3A-210ENST00000580713 CCDC174Q6PII3 467 aa13.08□□□□□ -0.32
TOP3A-210ENST00000580713 ADGRA1Q86SQ6 560 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms