RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 ATP2B2Q01814 1243 aa19.47■□□□□ 0.71
IFT20-210ENST00000580357 CTDSPL2Q05D32 466 aa19.47■□□□□ 0.71
IFT20-210ENST00000580357 ANKRD13CQ8N6S4 541 aa19.47■□□□□ 0.71
IFT20-210ENST00000580357 MKL1Q969V6 931 aa19.47■□□□□ 0.71
IFT20-210ENST00000580357 RNF41Q9H4P4 317 aaPredicted RBP19.47■□□□□ 0.71
IFT20-210ENST00000580357 VCPKMTQ9H867 229 aa19.47■□□□□ 0.71
IFT20-210ENST00000580357 PPP4R2Q9NY27 417 aa19.47■□□□□ 0.71
IFT20-210ENST00000580357 PTPN22Q9Y2R2 807 aa19.47■□□□□ 0.71
IFT20-210ENST00000580357 PRDM1O75626 825 aa19.46■□□□□ 0.71
IFT20-210ENST00000580357 COG2Q14746 738 aa19.46■□□□□ 0.71
IFT20-210ENST00000580357 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.46■□□□□ 0.71
IFT20-210ENST00000580357 RPAP3Q9H6T3 665 aaPredicted RBP19.46■□□□□ 0.71
IFT20-210ENST00000580357 MTMR4Q9NYA4 1195 aa19.46■□□□□ 0.71
IFT20-210ENST00000580357 MORF4L1Q9UBU8 362 aa19.46■□□□□ 0.71
IFT20-210ENST00000580357 CLIP2Q9UDT6 1046 aa19.46■□□□□ 0.71
IFT20-210ENST00000580357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.46■□□□□ 0.71
IFT20-210ENST00000580357 LOC285556D6RIA3 1793 aa19.46■□□□□ 0.71
IFT20-210ENST00000580357 MYH8P13535 1937 aa19.45■□□□□ 0.7
IFT20-210ENST00000580357 IGKV6D-41A0A0C4DH26 115 aa19.45■□□□□ 0.7
IFT20-210ENST00000580357 TSPY2A6NKD2 308 aa19.45■□□□□ 0.7
IFT20-210ENST00000580357 TTLL1O95922 423 aa19.45■□□□□ 0.7
IFT20-210ENST00000580357 BMP2KLQ5H9B9 411 aa19.45■□□□□ 0.7
IFT20-210ENST00000580357 LBX2Q6XYB7 198 aa19.45■□□□□ 0.7
IFT20-210ENST00000580357 MFSD6Q6ZSS7 791 aa19.45■□□□□ 0.7
IFT20-210ENST00000580357 GPRC5AQ8NFJ5 357 aa19.45■□□□□ 0.7
IFT20-210ENST00000580357 RABGAP1Q9Y3P9 1069 aa19.45■□□□□ 0.7
IFT20-210ENST00000580357 WDR46O15213 610 aaKnown RBP19.44■□□□□ 0.7
IFT20-210ENST00000580357 IMMTQ16891 758 aaKnown RBP19.44■□□□□ 0.7
IFT20-210ENST00000580357 AKNAD1Q5T1N1 836 aa19.44■□□□□ 0.7
IFT20-210ENST00000580357 RANBP6O60518 1105 aaKnown RBP19.43■□□□□ 0.7
IFT20-210ENST00000580357 FAM47AQ5JRC9 791 aa19.43■□□□□ 0.7
IFT20-210ENST00000580357 NBPF11Q86T75 865 aa19.43■□□□□ 0.7
IFT20-210ENST00000580357 STAG1Q8WVM7 1258 aa19.43■□□□□ 0.7
IFT20-210ENST00000580357 COA7Q96BR5 231 aa19.43■□□□□ 0.7
IFT20-210ENST00000580357 TRIM47Q96LD4 638 aa19.43■□□□□ 0.7
IFT20-210ENST00000580357 TOMM22Q9NS69 142 aa19.43■□□□□ 0.7
IFT20-210ENST00000580357 RBPJLQ9UBG7 517 aa19.43■□□□□ 0.7
IFT20-210ENST00000580357 SRRDQ9UH36 339 aa19.43■□□□□ 0.7
IFT20-210ENST00000580357 PLIN4Q96Q06 1357 aa19.43■□□□□ 0.7
IFT20-210ENST00000580357 CCNA1P78396 465 aa19.42■□□□□ 0.7
IFT20-210ENST00000580357 CCDC178Q5BJE1 867 aa19.42■□□□□ 0.7
IFT20-210ENST00000580357 MB21D1Q8N884 522 aa19.42■□□□□ 0.7
IFT20-210ENST00000580357 CEP95Q96GE4 821 aa19.42■□□□□ 0.7
IFT20-210ENST00000580357 TANGO6Q9C0B7 1094 aa19.42■□□□□ 0.7
IFT20-210ENST00000580357 ARHGAP39Q9C0H5 1083 aa19.42■□□□□ 0.7
IFT20-210ENST00000580357 TCP11L1Q9NUJ3 509 aa19.42■□□□□ 0.7
IFT20-210ENST00000580357 HPS5Q9UPZ3 1129 aa19.42■□□□□ 0.7
IFT20-210ENST00000580357 MYPNQ86TC9 1320 aa19.42■□□□□ 0.7
IFT20-210ENST00000580357 F5H6K3 240 aa19.41■□□□□ 0.7
IFT20-210ENST00000580357 TNPO2O14787 897 aaKnown RBP19.41■□□□□ 0.7
IFT20-210ENST00000580357 SGSM2O43147 1006 aa19.41■□□□□ 0.7
IFT20-210ENST00000580357 KLRC3Q07444 240 aa19.41■□□□□ 0.7
IFT20-210ENST00000580357 KIAA1211Q6ZU35 1233 aa19.41■□□□□ 0.7
IFT20-210ENST00000580357 CLEC10AQ8IUN9 316 aa19.41■□□□□ 0.7
IFT20-210ENST00000580357 CCAR1Q8IX12 1150 aaKnown RBP19.41■□□□□ 0.7
IFT20-210ENST00000580357 TTC14Q96N46 770 aa19.41■□□□□ 0.7
IFT20-210ENST00000580357 RAD21O60216 631 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 MAPK4P31152 587 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 DSG3P32926 999 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 HAND2P61296 217 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 ERVK-9P63128 1117 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 ERVK-24P63145 666 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 CASC1Q6TDU7 716 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 SPICE1Q8N0Z3 855 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 GMCL1P1Q8NEA9 526 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 ESR2Q92731 530 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 CNNM2Q9H8M5 875 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 INCENPQ9NQS7 918 aa19.4■□□□□ 0.7
IFT20-210ENST00000580357 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
IFT20-210ENST00000580357 FLOT1O75955 427 aa19.39■□□□□ 0.69
IFT20-210ENST00000580357 CAP1Q01518 475 aa19.39■□□□□ 0.69
IFT20-210ENST00000580357 RRP12Q5JTH9 1297 aaKnown RBP19.39■□□□□ 0.69
IFT20-210ENST00000580357 KIAA1755Q5JYT7 1200 aa19.39■□□□□ 0.69
IFT20-210ENST00000580357 RAET1EQ8TD07 263 aa19.39■□□□□ 0.69
IFT20-210ENST00000580357 KRT23Q9C075 422 aa19.39■□□□□ 0.69
IFT20-210ENST00000580357 SPDYE16A6NNV3 312 aaPredicted RBP19.38■□□□□ 0.69
IFT20-210ENST00000580357 CTGFP29279 349 aa19.38■□□□□ 0.69
IFT20-210ENST00000580357 NOVP48745 357 aa19.38■□□□□ 0.69
IFT20-210ENST00000580357 Q3C1V9 767 aa19.38■□□□□ 0.69
IFT20-210ENST00000580357 PAGR1Q9BTK6 254 aa19.38■□□□□ 0.69
IFT20-210ENST00000580357 TXNRD2Q9NNW7 524 aa19.38■□□□□ 0.69
IFT20-210ENST00000580357 STX8Q9UNK0 236 aa19.38■□□□□ 0.69
IFT20-210ENST00000580357 TACC3Q9Y6A5 838 aa19.38■□□□□ 0.69
IFT20-210ENST00000580357 IRF5Q13568 498 aa19.37■□□□□ 0.69
IFT20-210ENST00000580357 SLC9C1Q4G0N8 1177 aa19.37■□□□□ 0.69
IFT20-210ENST00000580357 PRPF38AQ8NAV1 312 aaKnown RBP19.37■□□□□ 0.69
IFT20-210ENST00000580357 MAP4K1Q92918 833 aa19.37■□□□□ 0.69
IFT20-210ENST00000580357 IL17RBQ9NRM6 502 aa19.37■□□□□ 0.69
IFT20-210ENST00000580357 FEM1BQ9UK73 627 aa19.37■□□□□ 0.69
IFT20-210ENST00000580357 ADAMTS5Q9UNA0 930 aa19.37■□□□□ 0.69
IFT20-210ENST00000580357 PTCH2Q9Y6C5 1203 aa19.37■□□□□ 0.69
IFT20-210ENST00000580357 GREB1LQ9C091 1923 aaPredicted RBP19.36■□□□□ 0.69
IFT20-210ENST00000580357 NDUFB10O96000 172 aa19.36■□□□□ 0.69
IFT20-210ENST00000580357 FDX1P10109 184 aa19.36■□□□□ 0.69
IFT20-210ENST00000580357 TRDNQ13061 729 aa19.36■□□□□ 0.69
IFT20-210ENST00000580357 FAM83BQ5T0W9 1011 aa19.36■□□□□ 0.69
IFT20-210ENST00000580357 SLFN13Q68D06 897 aa19.36■□□□□ 0.69
IFT20-210ENST00000580357 IQCA1Q86XH1 822 aa19.36■□□□□ 0.69
IFT20-210ENST00000580357 GMCL1Q96IK5 515 aa19.36■□□□□ 0.69
IFT20-210ENST00000580357 ESYT1Q9BSJ8 1104 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms